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PI0003378 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003378
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr10:4174254..4175645
RNA-Seq ExpressionPI0003378
SyntenyPI0003378
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047411.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-0445.45Show/hide
Query:  MQTLSEWSPLLRTTQSSAWNSQCELLGMLELKVHVNLCTK------SLKNTLNPLKNPPKMTEPTQ-------NPTIVLEPTKP-LDNLHRRAGHWTGR
        MQTL E SPLL   QS AW S CELLGMLELKVH    T+         N  N L+N PK  E  Q         T  L+  KP  D+  RR G   GR
Subjt:  MQTLSEWSPLLRTTQSSAWNSQCELLGMLELKVHVNLCTK------SLKNTLNPLKNPPKMTEPTQ-------NPTIVLEPTKP-LDNLHRRAGHWTGR
TrEMBL top hitse value%identityAlignment
A0A5D3CUK8 Gag/pol protein3.6e-0445.45Show/hide
Query:  MQTLSEWSPLLRTTQSSAWNSQCELLGMLELKVHVNLCTK------SLKNTLNPLKNPPKMTEPTQ-------NPTIVLEPTKP-LDNLHRRAGHWTGR
        MQTL E SPLL   QS AW S CELLGMLELKVH    T+         N  N L+N PK  E  Q         T  L+  KP  D+  RR G   GR
Subjt:  MQTLSEWSPLLRTTQSSAWNSQCELLGMLELKVHVNLCTK------SLKNTLNPLKNPPKMTEPTQ-------NPTIVLEPTKP-LDNLHRRAGHWTGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACACTCTCTGAATGGAGTCCGCTCCTACGCACAACCCAAAGCTCTGCCTGGAACTCACAGTGTGAACTTTTAGGGATGCTAGAGCTAAAAGTACATGTTAACCT
ATGTACAAAATCACTCAAGAACACGTTGAACCCGTTGAAAAACCCACCAAAAATGACAGAACCGACCCAAAACCCTACAATTGTGCTTGAACCTACCAAACCACTAGATA
ACCTTCATCGGCGAGCGGGTCACTGGACGGGTCGGGTGGATAGGATGTGTGGCATGTGGGATGCAAAGCATGGCCAGACGGGGTCGGATCACGGAGTGGGCTGGGGCGTA
AGGTGCTGGGCGTGGGCCGGATCGAAAGTAAGCGCGCGGGAGTGGATGGGCCGAGCAAGTGGGCTGAATCTGAATCGTTCGCAAGCGGTCAGGCCAAGGGGTGAACACTT
GAATCAGTCGGGTCTGGGAGCAATTCTGGGTCTGGAGCTTCTTTTCCAGAACTGTGAGCCAATTTCCTTCAATTTTTTCACAATTTTAGCTTTTCTCTCTCCCAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACACTCTCTGAATGGAGTCCGCTCCTACGCACAACCCAAAGCTCTGCCTGGAACTCACAGTGTGAACTTTTAGGGATGCTAGAGCTAAAAGTACATGTTAACCT
ATGTACAAAATCACTCAAGAACACGTTGAACCCGTTGAAAAACCCACCAAAAATGACAGAACCGACCCAAAACCCTACAATTGTGCTTGAACCTACCAAACCACTAGATA
ACCTTCATCGGCGAGCGGGTCACTGGACGGGTCGGGTGGATAGGATGTGTGGCATGTGGGATGCAAAGCATGGCCAGACGGGGTCGGATCACGGAGTGGGCTGGGGCGTA
AGGTGCTGGGCGTGGGCCGGATCGAAAGTAAGCGCGCGGGAGTGGATGGGCCGAGCAAGTGGGCTGAATCTGAATCGTTCGCAAGCGGTCAGGCCAAGGGGTGAACACTT
GAATCAGTCGGGTCTGGGAGCAATTCTGGGTCTGGAGCTTCTTTTCCAGAACTGTGAGCCAATTTCCTTCAATTTTTTCACAATTTTAGCTTTTCTCTCTCCCAGTTGA
Protein sequenceShow/hide protein sequence
MQTLSEWSPLLRTTQSSAWNSQCELLGMLELKVHVNLCTKSLKNTLNPLKNPPKMTEPTQNPTIVLEPTKPLDNLHRRAGHWTGRVDRMCGMWDAKHGQTGSDHGVGWGV
RCWAWAGSKVSAREWMGRASGLNLNRSQAVRPRGEHLNQSGLGAILGLELLFQNCEPISFNFFTILAFLSPS