; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003401 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003401
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionElf4 domain-containing protein
Genome locationchr10:14798440..14798826
RNA-Seq ExpressionPI0003401
SyntenyPI0003401
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0009649 - entrainment of circadian clock (biological process)
GO:0009909 - regulation of flower development (biological process)
GO:0010017 - red or far-red light signaling pathway (biological process)
GO:0010114 - response to red light (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0048573 - photoperiodism, flowering (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0042803 - protein homodimerization activity (molecular function)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031907.1 protein EARLY FLOWERING 4 [Cucumis melo var. makuwa]8.8e-6096.9Show/hide
Query:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSA TTTTTTTTTSDD P DAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA

KAG6600929.1 Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5288.37Show/hide
Query:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MAD NPRRKSK KPSA TTTTTTTTTSDDG  D FPDE DA+VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        YSDFSSDFS+ F+NHK RNGKRG++NPDA
Subjt:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA

XP_004149248.1 protein EARLY FLOWERING 4 [Cucumis sativus]1.7e-5895.35Show/hide
Query:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSA TTTTTTTTTSDD P  AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA

XP_008463236.2 PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo]8.8e-6096.9Show/hide
Query:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSA TTTTTTTTTSDD P DAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA

XP_038892867.1 protein EARLY FLOWERING 4-like [Benincasa hispida]3.5e-5692.37Show/hide
Query:  MADNNPRRKSKMKPSA--TTTTTTTTTSDDGPRDA-FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVV
        MADNNPRRKSKMKPSA  TTTTTTTTTSDDGP D  FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVV
Subjt:  MADNNPRRKSKMKPSA--TTTTTTTTTSDDGPRDA-FPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVV

Query:  SMYSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        SMYSDFSSDFS+AF NHKPRNGKRG+ NP+A
Subjt:  SMYSDFSSDFSTAFHNHKPRNGKRGTTNPDA

TrEMBL top hitse value%identityAlignment
A0A0A0KM35 Elf4 domain-containing protein8.1e-5995.35Show/hide
Query:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSA TTTTTTTTTSDD P  AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA

A0A1S3CIT1 uncharacterized protein LOC1035014404.3e-6096.9Show/hide
Query:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSA TTTTTTTTTSDD P DAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA

A0A5A7SR92 Protein EARLY FLOWERING 44.3e-6096.9Show/hide
Query:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSA TTTTTTTTTSDD P DAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA

A0A6J1GYX8 protein EARLY FLOWERING 4-like5.6e-5287.6Show/hide
Query:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MAD NPRRKSK KPSA TTTTTTTTTSDDG  D FPDE DA+VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        YSDFSSDFS+ F+N+K RNGKRG++NPDA
Subjt:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA

A0A6J1IH33 protein EARLY FLOWERING 4-like1.1e-5086.05Show/hide
Query:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MA+ N RRKSK KPSA TTTTTTTTTSDDG  D FPDE D +VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSA-TTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA
        YSDFSSDFS+ F+NHK RNGKRG++NPDA
Subjt:  YSDFSSDFSTAFHNHKPRNGKRGTTNPDA

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 46.9e-2366.67Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRG
        D  +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+MYSD ++ FS+ FH  K  NG  G
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRG

O80877 Protein ELF4-LIKE 11.8e-1551.16Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRGTT
        D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ +YSD S +F+  F + + R  K G T
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRGTT

Q570U6 Protein ELF4-LIKE 47.1e-1247.14Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

Q8S8F5 Protein ELF4-LIKE 32.9e-1339.33Show/hide
Query:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRGTTN
        + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V  +Y D S++FS +       +   G  N
Subjt:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRGTTN

Q94BS8 Protein ELF4-LIKE 22.3e-1043.06Show/hide
Query:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        + D ++  +F ++F QVQ +LD+NR LI ++N+NH+S+   ++  NV LI+ELN NI  V S+Y D S  F+
Subjt:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 45.1e-1347.14Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

AT1G17455.2 ELF4-like 45.1e-1347.14Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

AT2G06255.1 ELF4-like 32.1e-1439.33Show/hide
Query:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRGTTN
        + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V  +Y D S++FS +       +   G  N
Subjt:  EYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRGTTN

AT2G29950.1 ELF4-like 11.3e-1651.16Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRGTT
        D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ +YSD S +F+  F + + R  K G T
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRGTT

AT2G40080.1 Protein of unknown function (DUF1313)4.9e-2466.67Show/hide
Query:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRG
        D  +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+MYSD ++ FS+ FH  K  NG  G
Subjt:  DAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCAGCAACCACCACCACCACTACCACCACCACCAGCGACGACGGCCCACGTGACGCTTTCCCTGACGA
ATACGACGCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGGCAAGTCCAATCAGTGCTGGACAGAAACAGAACTCTGATTCAACAAGTGAATGAGAATCACCAATCTC
GAATCCCAAGCAACATGGTTGACAACGTTGCTTTAATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTTTCCACTGCT
TTCCATAACCACAAACCCAGAAATGGTAAAAGAGGCACCACCAACCCAGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCAGCAACCACCACCACCACTACCACCACCACCAGCGACGACGGCCCACGTGACGCTTTCCCTGACGA
ATACGACGCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGGCAAGTCCAATCAGTGCTGGACAGAAACAGAACTCTGATTCAACAAGTGAATGAGAATCACCAATCTC
GAATCCCAAGCAACATGGTTGACAACGTTGCTTTAATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTTTCCACTGCT
TTCCATAACCACAAACCCAGAAATGGTAAAAGAGGCACCACCAACCCAGATGCTTGA
Protein sequenceShow/hide protein sequence
MADNNPRRKSKMKPSATTTTTTTTTSDDGPRDAFPDEYDAEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA
FHNHKPRNGKRGTTNPDA