; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003463 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003463
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionYqgFc domain-containing protein
Genome locationchr09:2079673..2082621
RNA-Seq ExpressionPI0003463
SyntenyPI0003463
Gene Ontology termsGO:0000967 - rRNA 5'-end processing (biological process)
InterPro domainsIPR005227 - Putative pre-16S rRNA nuclease
IPR006641 - YqgF/RNase H-like domain
IPR012337 - Ribonuclease H-like superfamily
IPR037027 - YqgF/RNase H-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143911.1 uncharacterized protein LOC101219574 [Cucumis sativus]1.5e-8391.12Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYV+PLMLFRDL KRDALEHGRLLGLDVGDKYVGLAVSDPDNKIA PLSVL RKKT MDLMA+DFQ++ISEFSLAGFIVGYPF+RLR NPDA+QVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGET
        DDLCKTGKLEGVKYTFWDECFTSKNVE LIKPLNLLP VSKT+IDKFAAVGILQ YLDYFNRRPELGET
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGET

XP_008437257.1 PREDICTED: putative pre-16S rRNA nuclease isoform X1 [Cucumis melo]1.3e-7988.17Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYVKP +LFRDLLKRD L+H RLLGLDVGDKYVGLAVSDPDNKIASPLSVL RKK  MDLMAEDFQ+LISEFSLAGFIVGYPF+RLRKN +A+QVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGET
        DDLCKTGKLEGVKYTFWDE FTSKNVEQ+IKPLNLLP VSKT++DKFAAVGILQ YLDYFNRRPEL ET
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGET

XP_022957830.1 uncharacterized protein LOC111459253 [Cucurbita moschata]3.7e-7484.52Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYV+PL LFRDLLK +ALE GR LGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKT M LMA DFQ LISE SL+GFIVGYPF+  R+N DAVQVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE
        DDLCKTGKLEGVKYTFWDECFTSKNVE LIKPL L P++SKT+IDKFAAVGILQ YLD+FNRRPEL E
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE

XP_022995255.1 uncharacterized protein LOC111490857 [Cucurbita maxima]4.9e-7484.52Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYV+PL LFRDLLK +ALE GR LGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKT M LMA DFQ LISE SL+GFIVGYPF+  R+N DAVQVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE
        DDLCKTGKLEGVKYTFWDECFTSKNVE LIKPL L P++SKT+IDKFAAVGILQ YLD+FNRRPEL E
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE

XP_038875331.1 putative pre-16S rRNA nuclease isoform X1 [Benincasa hispida]8.0e-7786.9Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYVKPL LFRDLLKR+ LEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVL RKKT+M LMAEDF+ LIS+FSLAGFIVGYP  RLR+NPDAVQVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE
        D+LCKTGKLE VKYTFWDECFTSKNVE LIKPL L P++SKTV+DKFAAVGILQ YLDYFNRRPEL E
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE

TrEMBL top hitse value%identityAlignment
A0A0A0KMK7 YqgFc domain-containing protein7.3e-8491.12Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYV+PLMLFRDL KRDALEHGRLLGLDVGDKYVGLAVSDPDNKIA PLSVL RKKT MDLMA+DFQ++ISEFSLAGFIVGYPF+RLR NPDA+QVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGET
        DDLCKTGKLEGVKYTFWDECFTSKNVE LIKPLNLLP VSKT+IDKFAAVGILQ YLDYFNRRPELGET
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGET

A0A1S3ATQ4 putative pre-16S rRNA nuclease isoform X16.4e-8088.17Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYVKP +LFRDLLKRD L+H RLLGLDVGDKYVGLAVSDPDNKIASPLSVL RKK  MDLMAEDFQ+LISEFSLAGFIVGYPF+RLRKN +A+QVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGET
        DDLCKTGKLEGVKYTFWDE FTSKNVEQ+IKPLNLLP VSKT++DKFAAVGILQ YLDYFNRRPEL ET
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGET

A0A6J1E3H7 uncharacterized protein LOC1110261453.8e-7283.13Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYVKPL +FRDLL R+ LE GR LGLDVGDKYVGLAVSDPDN IASPLSVL RKKT+M LMA D Q LISE SLAGFIVGYPF+R R+N DAVQVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPEL
        DDLCKTG LEGVKYTFWDECFTSKNVE LIKPL L PV+SKT++DKFAAVGILQ YLDY NRRPEL
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPEL

A0A6J1H0B7 uncharacterized protein LOC1114592531.8e-7484.52Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYV+PL LFRDLLK +ALE GR LGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKT M LMA DFQ LISE SL+GFIVGYPF+  R+N DAVQVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE
        DDLCKTGKLEGVKYTFWDECFTSKNVE LIKPL L P++SKT+IDKFAAVGILQ YLD+FNRRPEL E
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE

A0A6J1K3L4 uncharacterized protein LOC1114908572.4e-7484.52Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYV+PL LFRDLLK +ALE GR LGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKT M LMA DFQ LISE SL+GFIVGYPF+  R+N DAVQVKIFI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE
        DDLCKTGKLEGVKYTFWDECFTSKNVE LIKPL L P++SKT+IDKFAAVGILQ YLD+FNRRPEL E
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGE

SwissProt top hitse value%identityAlignment
A4XKC6 Putative pre-16S rRNA nuclease7.0e-1535.17Show/hide
Query:  RLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAED----FQELISEFSLAGFIVGYPFNRLRKNPDAVQVKI-FIDDLC-KTGKLEGVKYTF
        R+L LD+G + +G+A+SDP    A P  VL       DL  ED      ++ +E  +   ++GYP ++   +PD    K+  ID++C +  +   V    
Subjt:  RLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAED----FQELISEFSLAGFIVGYPFNRLRKNPDAVQVKI-FIDDLC-KTGKLEGVKYTF

Query:  WDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFN
        WDE F++K VE++++  N+     K V+DK AAV ILQ YLD+ N
Subjt:  WDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFN

B0K0Q3 Putative pre-16S rRNA nuclease7.7e-1436.23Show/hide
Query:  RLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFN-RLRKNPDAVQVKIFIDDLCKTGKLEGVKYTFWDECF
        R++GLDVGDK +G+A+SD    IA  L+ + R   + D   E  +++I+E+ +   IVG P N      P   +V  F++ L    +   +    WDE  
Subjt:  RLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFN-RLRKNPDAVQVKIFIDDLCKTGKLEGVKYTFWDECF

Query:  TSKNVEQ-LIKPLNLLPVVSKTVIDKFAAVGILQDYLD
        T+   E+ LI+  ++     K VIDK AAV ILQ+YLD
Subjt:  TSKNVEQ-LIKPLNLLPVVSKTVIDKFAAVGILQDYLD

B0K996 Putative pre-16S rRNA nuclease1.7e-1335.51Show/hide
Query:  RLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFN-RLRKNPDAVQVKIFIDDLCKTGKLEGVKYTFWDECF
        R++GLDVGDK +G+A+SD    IA  L+ + R   + D   E  +++I+E+ +   IVG P N      P   +V  F++ L    +   +    WDE  
Subjt:  RLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFN-RLRKNPDAVQVKIFIDDLCKTGKLEGVKYTFWDECF

Query:  TSKNVEQ-LIKPLNLLPVVSKTVIDKFAAVGILQDYLD
        T+   ++ LI+  ++     K VIDK AAV ILQ+YLD
Subjt:  TSKNVEQ-LIKPLNLLPVVSKTVIDKFAAVGILQDYLD

B9MRK7 Putative pre-16S rRNA nuclease3.5e-1436.36Show/hide
Query:  RLLGLDVGDKYVGLAVSDPDNKIASP-LSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKI-FIDDLC-KTGKLEGVKYTFWDE
        R+L LD+G+  VG+A+SDP    A P +++  R K     + E+  ++   +++   ++GYP ++L  +PD    K+  ID++  K G    V+   WDE
Subjt:  RLLGLDVGDKYVGLAVSDPDNKIASP-LSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKI-FIDDLC-KTGKLEGVKYTFWDE

Query:  CFTSKNVEQLI-KPLNLLPVVSKTVIDKFAAVGILQDYLDYFN
         F++K VE++I + LN      K +IDK AAV ILQ YLD++N
Subjt:  CFTSKNVEQLI-KPLNLLPVVSKTVIDKFAAVGILQDYLDYFN

Q0AZP9 Putative pre-16S rRNA nuclease9.1e-1537.96Show/hide
Query:  RLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFN-RLRKNPDAVQVKIFIDDLCKTGKLEGVKYTFWDECF
        R++GLD+G+K +G+A SDP    A   S+L RK  + DL     QEL  EF +   ++G P N      P A++ + F   L +  K   +   FWDE  
Subjt:  RLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFN-RLRKNPDAVQVKIFIDDLCKTGKLEGVKYTFWDECF

Query:  TSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLD
        +SK+ E+++   +L     K +IDK AAV ILQ YLD
Subjt:  TSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLD

Arabidopsis top hitse value%identityAlignment
AT3G52905.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.9e-5361.73Show/hide
Query:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI
        MKYVKPL L  + LK      GR LGLDVGDKYVGLA+SDP N +ASPLSVL RKK+ +DLMA DFQ L+  FS++G +VGYPF +L    D V V +FI
Subjt:  MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFI

Query:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNR
        ++L KT KL+ VKYT+WDE  +SK VE ++KPLNL PV  KT++DK AAV ILQ+YLDY NR
Subjt:  DDLCKTGKLEGVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTATGTGAAGCCGTTGATGCTTTTTCGTGATTTGTTGAAGAGAGATGCACTTGAACATGGCCGTTTGCTTGGTTTAGATGTTGGTGATAAGTATGTTGGGTTAGC
CGTGTCTGACCCAGATAATAAAATCGCTTCCCCTCTTAGTGTTTTGTTTAGGAAGAAGACCCAAATGGATTTGATGGCTGAGGATTTTCAGGAATTGATCTCTGAATTCT
CCCTGGCGGGGTTCATTGTTGGGTACCCTTTCAATAGACTACGGAAAAACCCGGATGCTGTGCAAGTGAAGATCTTCATTGATGACCTTTGCAAAACTGGAAAACTTGAA
GGCGTAAAATATACTTTTTGGGATGAGTGCTTTACATCAAAGAATGTGGAACAACTGATAAAGCCATTGAACCTGCTCCCCGTTGTGTCAAAGACAGTAATTGACAAATT
TGCTGCTGTTGGAATACTTCAGGATTACTTGGATTATTTTAACAGAAGACCGGAATTGGGCGAGACGTAG
mRNA sequenceShow/hide mRNA sequence
CGAAATTGTGGTTTCTTCGTGCAATTAATCGCATCGAGAGCTCGGAAGGATTCGGGCTTCATCGAGTCTTGAGTCACATTCGATTGCGAATGAGTTTGAATGGGCAGCAC
CGATTGTACGTTTTGATCCTCAAAGGCGCGAAGCTGAAAATGGTTTGTATGAATTAAATAGCAATACAAGATGAAGTATGTGAAGCCGTTGATGCTTTTTCGTGATTTGT
TGAAGAGAGATGCACTTGAACATGGCCGTTTGCTTGGTTTAGATGTTGGTGATAAGTATGTTGGGTTAGCCGTGTCTGACCCAGATAATAAAATCGCTTCCCCTCTTAGT
GTTTTGTTTAGGAAGAAGACCCAAATGGATTTGATGGCTGAGGATTTTCAGGAATTGATCTCTGAATTCTCCCTGGCGGGGTTCATTGTTGGGTACCCTTTCAATAGACT
ACGGAAAAACCCGGATGCTGTGCAAGTGAAGATCTTCATTGATGACCTTTGCAAAACTGGAAAACTTGAAGGCGTAAAATATACTTTTTGGGATGAGTGCTTTACATCAA
AGAATGTGGAACAACTGATAAAGCCATTGAACCTGCTCCCCGTTGTGTCAAAGACAGTAATTGACAAATTTGCTGCTGTTGGAATACTTCAGGATTACTTGGATTATTTT
AACAGAAGACCGGAATTGGGCGAGACGTAGAGTATGGTGGACTATATGGGATCAGACATTTGATTCTCCCTTCTTAGTAGGGGATGGAACAATTTATTTTGAAGCTCTCA
GTTCTGAAGTGGCGATGGATATGCATTGATGAATTGATATTATTGTCAATTTTATCTTAAAAGGGTGAATTATCTGCTCACAATCTACTAATCAGCTAATGGGGTCCCTC
TTTATGTAGACTTTTTCTTGTGGGAATTCTATCAAGTGCTTGTTTCCATGTTTGTTTATTTCTAAATTATTACTAATGACAACAATTGTTCCATATAGTTTGTCTATATT
AAAAATCACCCTCTTTTATTTTAAAAATGGCTTCAATTGTTTTA
Protein sequenceShow/hide protein sequence
MKYVKPLMLFRDLLKRDALEHGRLLGLDVGDKYVGLAVSDPDNKIASPLSVLFRKKTQMDLMAEDFQELISEFSLAGFIVGYPFNRLRKNPDAVQVKIFIDDLCKTGKLE
GVKYTFWDECFTSKNVEQLIKPLNLLPVVSKTVIDKFAAVGILQDYLDYFNRRPELGET