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PI0003496 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003496
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:19369866..19370030
RNA-Seq ExpressionPI0003496
SyntenyPI0003496
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033880.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.5e-1369.81Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRN
        MTN DILD++DE DST+ TT G++IHYIET + W+QWRDELA+ MFSDW+LRN
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRN

KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.5e-1370.37Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ
        MTN DI D +DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MF+DW+LRNQ
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-1368.52Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ
        MTN++I+D++DEGDSTYATTGG+EI+YIE S+ WS+WRD+LA  MFSDW+L+ Q
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-1372.22Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ
        MTN DI D +DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MFSDW+LRNQ
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.2e-1372.22Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ
        MTN DI D +DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MFSDW+LRNQ
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7U033 Retrotransposon protein7.4e-1468.52Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ
        MTN DILD++DE DST+ TT  ++IHYI+TS+ WSQWRDELA+ MFSDW+LRN+
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ

A0A5A7VJX3 Retrotransposon protein5.7e-1472.22Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ
        MTN DI D +DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MFSDW+LRNQ
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ

A0A5D3BL48 Putative nuclease HARBI15.7e-1472.22Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ
        MTN DI D +DE DST+ATT  ++IHYIETS+ WSQWRD+LAE MFSDW+LRNQ
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ

A0A5D3BQ11 Putative nuclease HARBI17.4e-1469.81Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRN
        MTN DILD++DE DST+ TT G++IHYIET + W+QWRDELA+ MFSDW+LRN
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRN

A0A5D3DG22 Retrotransposon protein5.7e-1468.52Show/hide
Query:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ
        MTN++I+D++DEGDSTYATTGG+EI+YIE S+ WS+WRD+LA  MFSDW+L+ Q
Subjt:  MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACGCTGACATACTAGACGAAGTTGATGAGGGTGACTCAACGTACGCCACCACTGGCGGTGAGGAAATTCACTACATAGAGACGTCCAGCGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGAAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACGCTGACATACTAGACGAAGTTGATGAGGGTGACTCAACGTACGCCACCACTGGCGGTGAGGAAATTCACTACATAGAGACGTCCAGCGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAGAATGTTCAGTGATTGGAAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNADILDEVDEGDSTYATTGGEEIHYIETSSAWSQWRDELAERMFSDWKLRNQ