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PI0003505 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003505
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationchr04:17573719..17594732
RNA-Seq ExpressionPI0003505
SyntenyPI0003505
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606311.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]7.0e-1368.75Show/hide
Query:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDST--NNQNHEQNQK
        +AD E AVPKFGEW+DRDA  P+NYT IF KVREERQDQ  R TPT P +S   +NQN EQNQK
Subjt:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDST--NNQNHEQNQK

KAG7036250.1 hypothetical protein SDJN02_03052 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-1367.69Show/hide
Query:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDST--NNQNHEQNQKL
        +AD E AVPKFGEW+DRDA  P+NYT IF KVREERQDQ  R TPT P +S   +NQN EQNQK+
Subjt:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDST--NNQNHEQNQKL

XP_015086553.1 RPM1-interacting protein 4 isoform X1 [Solanum pennellii]4.4e-0750.82Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQK
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q+
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQK

XP_015086554.1 RPM1-interacting protein 4 isoform X2 [Solanum pennellii]4.4e-0750.82Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQK
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q+
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQK

XP_038888923.1 RPM1-interacting protein 4-like [Benincasa hispida]3.0e-1668.49Show/hide
Query:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRG-TPTRPI-DSTNNQNHEQNQKLGQKIRWSR
        +ADNEA VPKFGEWDDRDAKAPENYT IF KVRE RQ+  +R  TP R I +STNNQNHE NQK      W R
Subjt:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRG-TPTRPI-DSTNNQNHEQNQKLGQKIRWSR

TrEMBL top hitse value%identityAlignment
A0A0A0L950 AvrRpt-cleavage domain-containing protein5.0e-4992.38Show/hide
Query:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQKLGQKIRWSRYCLEMDFYDRVAEELENIDEYSGYEGTYH
        +ADNE AVPKFGEWDD DAKAPENYT IFNKVREERQDQ VRGTPTR IDSTN+QNHEQNQKLGQKIRWSRYCLEMDFYDRVA ELENIDEYSGYEGTYH
Subjt:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQKLGQKIRWSRYCLEMDFYDRVAEELENIDEYSGYEGTYH

Query:  KRLSS
        KRLSS
Subjt:  KRLSS

A0A6N2AQE8 AvrRpt-cleavage domain-containing protein2.1e-0750.82Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQK
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q+
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQK

M1CPC9 RIN4c protein3.6e-0751.67Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQ
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQ

M1CPD0 RIN4c protein3.6e-0751.67Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQ
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQ

M1CPD2 RIN4c protein3.6e-0751.67Show/hide
Query:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQ
        +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q
Subjt:  ADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQ

SwissProt top hitse value%identityAlignment
O22633 Protein NOI42.8e-0442.22Show/hide
Query:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTP
        ++D    +PKFGEWD  D  + E +T IFNK R+E++     G+P
Subjt:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTP

Q8GYN5 RPM1-interacting protein 42.1e-0448.08Show/hide
Query:  VPKFGEWDDRDAKAPENYTTIFNKVREERQDQA-VRGTPTRPI-DSTNNQNH
        VPKFG+WD+ +  + + YT IFNKVREER   A V G+   P   S+ N N+
Subjt:  VPKFGEWDDRDAKAPENYTTIFNKVREERQDQA-VRGTPTRPI-DSTNNQNH

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein9.8e-0536.36Show/hide
Query:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQKLGQK
        +AD    +PKFGEWD  D  + E +T IFNK R E++      +P +  +   N+N E  +K  +K
Subjt:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQKLGQK

AT3G25070.1 RPM1 interacting protein 41.5e-0548.08Show/hide
Query:  VPKFGEWDDRDAKAPENYTTIFNKVREERQDQA-VRGTPTRPI-DSTNNQNH
        VPKFG+WD+ +  + + YT IFNKVREER   A V G+   P   S+ N N+
Subjt:  VPKFGEWDDRDAKAPENYTTIFNKVREERQDQA-VRGTPTRPI-DSTNNQNH

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein2.0e-0542.22Show/hide
Query:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTP
        ++D    +PKFGEWD  D  + E +T IFNK R+E++     G+P
Subjt:  LADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTP

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein5.7e-0544.19Show/hide
Query:  DNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTP
        D    +PKFGEWD  D  + E +T IFNK R+E++     G+P
Subjt:  DNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTP

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein5.7e-0544.19Show/hide
Query:  DNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTP
        D    +PKFGEWD  D  + E +T IFNK R+E++     G+P
Subjt:  DNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGATTTCTTGTATTGGCTGATAACGAAGCTGCAGTTCCAAAATTTGGTGAATGGGATGACAGGGATGCAAAAGCACCGGAGAACTACACGACTATTTTCAACAA
GGTGCGGGAAGAGAGACAAGATCAAGCAGTGCGAGGGACGCCGACACGGCCGATTGACAGCACAAACAACCAAAATCATGAACAGAATCAAAAGTTGGGGCAAAAGATCC
GATGGAGTAGGTATTGTTTGGAGATGGATTTTTATGATCGGGTTGCTGAGGAGCTTGAAAATATAGATGAGTACTCAGGCTATGAGGGGACATACCACAAGAGGTTATCA
TCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGGATTTCTTGTATTGGCTGATAACGAAGCTGCAGTTCCAAAATTTGGTGAATGGGATGACAGGGATGCAAAAGCACCGGAGAACTACACGACTATTTTCAACAA
GGTGCGGGAAGAGAGACAAGATCAAGCAGTGCGAGGGACGCCGACACGGCCGATTGACAGCACAAACAACCAAAATCATGAACAGAATCAAAAGTTGGGGCAAAAGATCC
GATGGAGTAGGTATTGTTTGGAGATGGATTTTTATGATCGGGTTGCTGAGGAGCTTGAAAATATAGATGAGTACTCAGGCTATGAGGGGACATACCACAAGAGGTTATCA
TCGTAG
Protein sequenceShow/hide protein sequence
MIGFLVLADNEAAVPKFGEWDDRDAKAPENYTTIFNKVREERQDQAVRGTPTRPIDSTNNQNHEQNQKLGQKIRWSRYCLEMDFYDRVAEELENIDEYSGYEGTYHKRLS
S