; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003510 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003510
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein SKIP34
Genome locationchr08:20841518..20842463
RNA-Seq ExpressionPI0003510
SyntenyPI0003510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034234.1 Protein SKIP34, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-3689.69Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGN-GDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHR LFRGS+SP QTSVPGN GDASVVDNLR RL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSDRQEYVVRLL+PVSRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGN-GDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

XP_008440533.1 PREDICTED: protein SKIP34 [Cucumis melo]2.6e-4095.83Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHRPLFRGS  PYQTSVP NG ASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

XP_011657944.1 protein SKIP34 [Cucumis sativus]1.2e-4095.83Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHRPLFRGSL PYQTSVP NG  SVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

XP_022950522.1 protein SKIP34 [Cucurbita moschata]3.9e-3689.69Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGN-GDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHR LFRGS+SP QTSVP N GDASVVDNLRGRL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSDRQEYVVRLL+PVSRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGN-GDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

XP_023544310.1 protein SKIP34 [Cucurbita pepo subsp. pepo]5.1e-3687.5Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHR LFRG++SP QTSVP NGDASVVDNLRGRL ETE RLAQVRAREA LSRLLEEMKRLV VMEILENYLKR+Y DRQEYVVRLL+PVSRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

TrEMBL top hitse value%identityAlignment
A0A0A0KIR5 Uncharacterized protein5.7e-4195.83Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHRPLFRGSL PYQTSVP NG  SVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

A0A1S3B1B8 protein SKIP341.3e-4095.83Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHRPLFRGS  PYQTSVP NG ASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

A0A5D3CN14 Protein SKIP341.3e-4095.83Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHRPLFRGS  PYQTSVP NG ASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

A0A6J1GF20 protein SKIP341.9e-3689.69Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGN-GDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHR LFRGS+SP QTSVP N GDASVVDNLRGRL ETE RLAQVRAREA LSRLLEEMKRLVSVMEILENYLKR+YSDRQEYVVRLL+PVSRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGN-GDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

A0A6J1IV54 protein SKIP343.2e-3686.46Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MCNGHHR LFRGS+SP QTSVP NGDASVVDNLRGRL ETE RLAQVRAREA LSR+LEEMKRLVSVMEIL+NYLKR+Y DRQEYVVRLL+P+SRK
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

SwissProt top hitse value%identityAlignment
Q8GWU7 Protein SKIP347.2e-1753.12Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MC GH++ L   S S  +       D SVVD+LR RL ETE RL + RAREAELSR LE MKR VSVMEI+E +L+R++ ++++ + RL SPVS K
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK

Arabidopsis top hitse value%identityAlignment
AT5G65495.1 unknown protein5.1e-1853.12Show/hide
Query:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK
        MC GH++ L   S S  +       D SVVD+LR RL ETE RL + RAREAELSR LE MKR VSVMEI+E +L+R++ ++++ + RL SPVS K
Subjt:  MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAACGGCCACCACCGACCTTTGTTCAGAGGTAGCCTTTCTCCCTACCAAACCTCCGTACCCGGAAACGGCGACGCATCCGTTGTGGACAACCTACGGGGTCGATT
AGAGGAAACCGAGTTGCGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGAGCTCAGCCGACTCTTGGAAGAAATGAAACGATTAGTATCTGTGATGGAGATCCTCGAGAACT
ACCTGAAACGGCAGTACAGCGACCGTCAAGAATATGTGGTTCGTCTCCTCTCCCCTGTATCTCGAAAATAG
mRNA sequenceShow/hide mRNA sequence
ACTCAAGTTTACCACCAAATCAAAATAACGTTCCTAACGGCAGGCTACGACGTCGTTTTAAAAGCGAGCTTGAGGTTGGACCATACCCACCCAACCCAAGATCCGTTTGA
CCATAAGATTCAAGAAGTCAAAATTCATTCTCAGAATTCAGAGCAGCCCCAAGAACCCGATTTGTTTATCCAAATACAGATTCATCTCTCTTTCTGGCGATCGTCGATTA
TCAGTCTCCGCCATGTGTAACGGCCACCACCGACCTTTGTTCAGAGGTAGCCTTTCTCCCTACCAAACCTCCGTACCCGGAAACGGCGACGCATCCGTTGTGGACAACCT
ACGGGGTCGATTAGAGGAAACCGAGTTGCGGCTGGCTCAAGTTAGGGCTCGAGAGGCGGAGCTCAGCCGACTCTTGGAAGAAATGAAACGATTAGTATCTGTGATGGAGA
TCCTCGAGAACTACCTGAAACGGCAGTACAGCGACCGTCAAGAATATGTGGTTCGTCTCCTCTCCCCTGTATCTCGAAAATAGAAATTCCTCTTCGCCGTCGGTGTCTAT
AATTTTAGCAGTACCATCCAAAACTCGTTTTGTTTACTCGCATCTTCGCTCTTCTCATTCTCAATCCTCGTAGATTGTAATCGCCTCCAAATGTATGGATTTATTCGCCC
TAGATTTCACTTGTGAATGGAATCGTGGAATCGATACCGTTAGCTTGTTCAATCGAAAGAGATTTTCAGTTTTTTGAATGAGAGCGAGTTGCAAATCGCTAAGACGATCA
TTTTGTTGTTTCTTGATGGAATATATGGCAGTTTTCTGTAATCTAATTAGTCATATTGTAAGTATTTCTCAGATTATAACATTGGTTTTAAAAGGTTTTTAGATGAAACT
TATGTGAAAGTCATCTAACTTGGGAATGGAATCGTCAAATTGATACCATTAACTCTGTCCAATCAA
Protein sequenceShow/hide protein sequence
MCNGHHRPLFRGSLSPYQTSVPGNGDASVVDNLRGRLEETELRLAQVRAREAELSRLLEEMKRLVSVMEILENYLKRQYSDRQEYVVRLLSPVSRK