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PI0003520 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003520
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:14357127..14357357
RNA-Seq ExpressionPI0003520
SyntenyPI0003520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038192.1 hypothetical protein E6C27_scaffold270G00250 [Cucumis melo var. makuwa]6.7e-1558.46Show/hide
Query:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNF
        M   QVNAA  S  +  Q+D++GC+  G PH  DACPLN E VA+V++DP+S+TYNP WRNHPNF
Subjt:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNF

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]4.5e-1955.26Show/hide
Query:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG
        M ++QVN    SVH    + +M CVGC G +NTD CP NT+ + + +NDP+S+TYN GWRNH NF WGG+GQ NQG
Subjt:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]5.0e-1857.89Show/hide
Query:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG
        M + +VN A   VH   Q+ ++GCVGCGGPHNTD CP NTETVA+V+NDP+ +TYN GWRNH NF WG   +  +G
Subjt:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG

TYK04238.1 hypothetical protein E5676_scaffold758G00120 [Cucumis melo var. makuwa]7.9e-1670.91Show/hide
Query:  MGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG
        MGCVG G PHNT+ CPLNTE VA+V+NDP+S+TYN GWR HPNF WGG    NQG
Subjt:  MGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG

TYK11061.1 hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa]1.1e-1464.06Show/hide
Query:  QVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWG
        QVNAAG  VHA  Q+ ++GCVGC GPHNT+ACP N E  A V+    S+TYN GWRNHPNF WG
Subjt:  QVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWG

TrEMBL top hitse value%identityAlignment
A0A5A7UTC1 Uncharacterized protein2.2e-1955.26Show/hide
Query:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG
        M ++QVN    SVH    + +M CVGC G +NTD CP NT+ + + +NDP+S+TYN GWRNH NF WGG+GQ NQG
Subjt:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG

A0A5A7VE68 Uncharacterized protein2.4e-1857.89Show/hide
Query:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG
        M + +VN A   VH   Q+ ++GCVGCGGPHNTD CP NTETVA+V+NDP+ +TYN GWRNH NF WG   +  +G
Subjt:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG

A0A5D3BYZ5 Uncharacterized protein3.8e-1670.91Show/hide
Query:  MGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG
        MGCVG G PHNT+ CPLNTE VA+V+NDP+S+TYN GWR HPNF WGG    NQG
Subjt:  MGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG

A0A5D3CGY4 Uncharacterized protein5.5e-1564.06Show/hide
Query:  QVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWG
        QVNAAG  VHA  Q+ ++GCVGC GPHNT+ACP N E  A V+    S+TYN GWRNHPNF WG
Subjt:  QVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWG

A0A5D3CSC7 Uncharacterized protein3.3e-1558.46Show/hide
Query:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNF
        M   QVNAA  S  +  Q+D++GC+  G PH  DACPLN E VA+V++DP+S+TYNP WRNHPNF
Subjt:  MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATCGCAAGTCAATGCCGCAGGAGGGTCTGTGCACGCGGCAAACCAAATTGATGATATGGGATGTGTGGGATGCGGCGGTCCTCATAATACTGACGCATGTCC
ACTTAACACCGAAACAGTCGCGTTCGTAAGGAATGACCCCTTCTCCAGTACTTACAACCCTGGTTGGAGGAACCATCCTAATTTTGGATGGGGAGGATCGGGTCAACAAA
ATCAAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATCGCAAGTCAATGCCGCAGGAGGGTCTGTGCACGCGGCAAACCAAATTGATGATATGGGATGTGTGGGATGCGGCGGTCCTCATAATACTGACGCATGTCC
ACTTAACACCGAAACAGTCGCGTTCGTAAGGAATGACCCCTTCTCCAGTACTTACAACCCTGGTTGGAGGAACCATCCTAATTTTGGATGGGGAGGATCGGGTCAACAAA
ATCAAGGGTGA
Protein sequenceShow/hide protein sequence
MAISQVNAAGGSVHAANQIDDMGCVGCGGPHNTDACPLNTETVAFVRNDPFSSTYNPGWRNHPNFGWGGSGQQNQG