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PI0003540 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003540
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:10250017..10251615
RNA-Seq ExpressionPI0003540
SyntenyPI0003540
Gene Ontology termsGO:0004518 - nuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON98093.1 Endonuclease/exonuclease/phosphatase [Trema orientale]8.2e-1541.54Show/hide
Query:  AVDFWSFTSIYGNPMREKHIDTQKLLHRLGG---------ELRKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLG
        A++ WS+  +    +R K  ++QK L RL G         E+RK E +++ LL  EE YWK  S  +WL   D+NTK+FHNKAS RKKKN I  IR+  G
Subjt:  AVDFWSFTSIYGNPMREKHIDTQKLLHRLGG---------ELRKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLG

Query:  IWVEGDDEVGAVASNFFRELFRS---SIDQ
         WVEG+D +  +   +F ++F+S   S+D+
Subjt:  IWVEGDDEVGAVASNFFRELFRS---SIDQ

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]7.7e-1346.51Show/hide
Query:  GGELRKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFRELFRSS
        G E+RK E ++  +L +EE+YWK RS  +WLK GDKNTK+FH+KAS R++KN I  + ++ G WV+  + +      FF++LF SS
Subjt:  GGELRKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFRELFRSS

XP_012842431.1 PREDICTED: uncharacterized protein LOC105962665 [Erythranthe guttata]7.7e-1338.89Show/hide
Query:  KDAVDFWSFTSIYGNPMREKHIDTQKLLHRLGGELRKAEL---------ELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNN
        K A+  WS +SI  NP R +    QK LH LG  L+  E+         EL++L  + + YWK RS  +W+K GD+NT +FH KA+ RK+ N++  I+N+
Subjt:  KDAVDFWSFTSIYGNPMREKHIDTQKLLHRLGGELRKAEL---------ELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNN

Query:  LGIWVEGDDEVGAVASNFFRELFRSS
        LG W +   E+  V +N+F  +F+S+
Subjt:  LGIWVEGDDEVGAVASNFFRELFRSS

XP_023911628.1 uncharacterized protein LOC112023240 [Quercus suber]1.1e-1448.08Show/hide
Query:  DTQKLLHRLG----GELRKAEL-----ELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFREL
        +TQK L RL      E  KA+      ++ +LL ++E+YW  RS   WL+ GD+NTK+FH KASQR++KN+I+ IRN+ G WVE  +EVG VAS++F +L
Subjt:  DTQKLLHRLG----GELRKAEL-----ELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFREL

Query:  FRSS
        F++S
Subjt:  FRSS

XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata]9.1e-1450.49Show/hide
Query:  DTQKLLHRLG----GELRKAE-LELKK----LLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFREL
        + QK L RL      E  KAE L L K    LL ++E+YW  RS   WL+ GD+NTK+FH KASQR++KNFI  IRN+ G WVE  +EVG VA+++F  L
Subjt:  DTQKLLHRLG----GELRKAE-LELKK----LLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFREL

Query:  FRS
        F++
Subjt:  FRS

TrEMBL top hitse value%identityAlignment
A0A2N9F5Y8 Reverse transcriptase domain-containing protein2.6e-1440.78Show/hide
Query:  REKHIDTQKLLHRLGGELRKAE---LELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFRELF
        ++K ++  +++   GG L  A+   +E+ +LL +EE  W+ RS   WLK GD+NTK+FH +ASQR+++N I  +R++ GIW E +D+V  V  ++FR LF
Subjt:  REKHIDTQKLLHRLGGELRKAE---LELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFRELF

Query:  RSS
         +S
Subjt:  RSS

A0A2N9IMR2 Reverse transcriptase domain-containing protein4.4e-1445.45Show/hide
Query:  RLGGELRKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFRELFRSS
        R GG  +   +E+ +LL +EE  W+ RS   WLK GD+NTK+FH +ASQR+++N I  +R++ GIW E +D+V  V  ++FR LF +S
Subjt:  RLGGELRKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFRELFRSS

A0A2P5FJZ0 Endonuclease/exonuclease/phosphatase4.0e-1541.54Show/hide
Query:  AVDFWSFTSIYGNPMREKHIDTQKLLHRLGG---------ELRKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLG
        A++ WS+  +    +R K  ++QK L RL G         E+RK E +++ LL  EE YWK  S  +WL   D+NTK+FHNKAS RKKKN I  IR+  G
Subjt:  AVDFWSFTSIYGNPMREKHIDTQKLLHRLGG---------ELRKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLG

Query:  IWVEGDDEVGAVASNFFRELFRS---SIDQ
         WVEG+D +  +   +F ++F+S   S+D+
Subjt:  IWVEGDDEVGAVASNFFRELFRS---SIDQ

A0A2Z6N2E1 Uncharacterized protein8.3e-1352.44Show/hide
Query:  RKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFRELFRSS
        R+ E +  +LL +EEL W+ RS   WLK GDKNTK+FH KASQRKK N I  +++  GIW  G D+V  V  +FF  LF SS
Subjt:  RKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFRELFRSS

A0A444YA93 Reverse transcriptase domain-containing protein8.3e-1338.66Show/hide
Query:  YGNPMREKHIDTQKLLHRLGGELRKAEL----------------ELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWV
        +GN  R+K    ++LL+R+ G ++K+ L                EL+K+L +EE++W  +S ++WL  GD+NTK+FH K   R++KN I  +RNN GIW 
Subjt:  YGNPMREKHIDTQKLLHRLGGELRKAEL----------------ELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWV

Query:  EGDDEVGAVASNFFRELFR
        E  + V ++ SNFF +L+R
Subjt:  EGDDEVGAVASNFFRELFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACAGAGTTGAAGGAACAGGGGAACAGTCTTGGAGTGGGATGTGTAGGAGGTGATGATATCCGATCGAAGGGTGATTTATATGGGTCGAAGCACAACTTGAAGCC
AAAGATGATTCCATCGTTAGGAATGAAGAACTTGGCACTAGAAACTATACCTGAGAAATCGTCGACGCTCGAAAAAGAGAAAGGAAAGATGAAAGAAGGGGAAAGCAACA
CGAATCTTGATGTGGGCCATATTGATGTCACCATTAAAGATGCAGTAGATTTTTGGAGTTTCACTAGTATTTATGGTAACCCGATGAGAGAGAAGCATATTGATACACAG
AAGTTGTTACATAGGCTCGGAGGTGAGCTCCGCAAGGCTGAGTTAGAGCTTAAGAAGCTGTTGAGTGAAGAGGAACTATACTGGAAGAATAGATCTAGTGAAGAATGGCT
TAAATCAGGGGACAAGAATACCAAATGGTTCCACAATAAGGCATCTCAAAGGAAAAAGAAAAACTTTATTGCAGACATTCGAAACAATCTTGGGATATGGGTTGAGGGGG
ATGATGAGGTGGGGGCGGTAGCCTCTAATTTCTTTAGAGAGCTTTTTCGTTCAAGCATTGACCAACATTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGACAGAGTTGAAGGAACAGGGGAACAGTCTTGGAGTGGGATGTGTAGGAGGTGATGATATCCGATCGAAGGGTGATTTATATGGGTCGAAGCACAACTTGAAGCC
AAAGATGATTCCATCGTTAGGAATGAAGAACTTGGCACTAGAAACTATACCTGAGAAATCGTCGACGCTCGAAAAAGAGAAAGGAAAGATGAAAGAAGGGGAAAGCAACA
CGAATCTTGATGTGGGCCATATTGATGTCACCATTAAAGATGCAGTAGATTTTTGGAGTTTCACTAGTATTTATGGTAACCCGATGAGAGAGAAGCATATTGATACACAG
AAGTTGTTACATAGGCTCGGAGGTGAGCTCCGCAAGGCTGAGTTAGAGCTTAAGAAGCTGTTGAGTGAAGAGGAACTATACTGGAAGAATAGATCTAGTGAAGAATGGCT
TAAATCAGGGGACAAGAATACCAAATGGTTCCACAATAAGGCATCTCAAAGGAAAAAGAAAAACTTTATTGCAGACATTCGAAACAATCTTGGGATATGGGTTGAGGGGG
ATGATGAGGTGGGGGCGGTAGCCTCTAATTTCTTTAGAGAGCTTTTTCGTTCAAGCATTGACCAACATTACTGA
Protein sequenceShow/hide protein sequence
MMTELKEQGNSLGVGCVGGDDIRSKGDLYGSKHNLKPKMIPSLGMKNLALETIPEKSSTLEKEKGKMKEGESNTNLDVGHIDVTIKDAVDFWSFTSIYGNPMREKHIDTQ
KLLHRLGGELRKAELELKKLLSEEELYWKNRSSEEWLKSGDKNTKWFHNKASQRKKKNFIADIRNNLGIWVEGDDEVGAVASNFFRELFRSSIDQHY