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PI0003548 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003548
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein LITTLE ZIPPER 3-like
Genome locationchr06:1653629..1655012
RNA-Seq ExpressionPI0003548
SyntenyPI0003548
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049024.1 protein LITTLE ZIPPER 3-like [Cucumis melo var. makuwa]2.6e-3495.18Show/hide
Query:  MRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACGWEIKQNHL
        MRF  EEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSAC WE KQNHL
Subjt:  MRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACGWEIKQNHL

KGN56585.1 hypothetical protein Csa_011002 [Cucumis sativus]5.2e-5193.91Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        MCHSS FILTPSYLACR  RRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS YKPP SS
Subjt:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

Query:  SDLSACGWEIKQNHL
        SDLSAC WE KQNHL
Subjt:  SDLSACGWEIKQNHL

XP_022924351.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]5.7e-3483.81Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        MC SSR  LT S+L  R HRRRP+RVY LLRRMRF KEEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ S
Subjt:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

Query:  SDLSA
        S+LSA
Subjt:  SDLSA

XP_022980450.1 protein LITTLE ZIPPER 1-like [Cucurbita maxima]1.7e-3382.86Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        MC SSR  LT S+L  R HRRRP+RVY LLRRMRF KEEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  
Subjt:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

Query:  SDLSA
        S+LSA
Subjt:  SDLSA

XP_038901104.1 protein LITTLE ZIPPER 1-like [Benincasa hispida]5.3e-4083.48Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        MC SSR ILTPSYLACR HRRRPVRVY LLRRM+FAKEE     V+ EMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLS+LQNFS++KP Q S
Subjt:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

Query:  SDLSACGWEIKQNHL
        SDLS CG EIKQNHL
Subjt:  SDLSACGWEIKQNHL

TrEMBL top hitse value%identityAlignment
A0A0A0L3S0 Uncharacterized protein2.5e-5193.91Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        MCHSS FILTPSYLACR  RRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS YKPP SS
Subjt:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

Query:  SDLSACGWEIKQNHL
        SDLSAC WE KQNHL
Subjt:  SDLSACGWEIKQNHL

A0A5D3D1P7 Protein LITTLE ZIPPER 3-like1.2e-3495.18Show/hide
Query:  MRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACGWEIKQNHL
        MRF  EEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSAC WE KQNHL
Subjt:  MRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACGWEIKQNHL

A0A6J1CZF0 protein LITTLE ZIPPER 2-like1.9e-2772Show/hide
Query:  MCHSSRFIL---TPSYLACRH-HRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKP
        MC SSR +    T S L CRH HRR P+RV+ L+RRMR  KEEA   GV+VEMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q+FS+ KP
Subjt:  MCHSSRFIL---TPSYLACRH-HRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKP

A0A6J1E9A8 protein LITTLE ZIPPER 1-like2.8e-3483.81Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        MC SSR  LT S+L  R HRRRP+RVY LLRRMRF KEEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ S
Subjt:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

Query:  SDLSA
        S+LSA
Subjt:  SDLSA

A0A6J1IWC5 protein LITTLE ZIPPER 1-like8.1e-3482.86Show/hide
Query:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        MC SSR  LT S+L  R HRRRP+RVY LLRRMRF KEEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K PQ  
Subjt:  MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

Query:  SDLSA
        S+LSA
Subjt:  SDLSA

SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 13.9e-0948.35Show/hide
Query:  MCHSS--RFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        MC SS   F  TP+ L      +  VR+  L RR R  +EE        +ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ
Subjt:  MCHSS--RFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

Q56WL5 Protein LITTLE ZIPPER 44.9e-0460.98Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        ME  N KLY++N  II+ENERLRKKA +L++ENQ LL +L+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

Q9LXI8 Protein LITTLE ZIPPER 34.9e-0454.55Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSDYKPPQSSSD
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL Q  S  K   + S+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSDYKPPQSSSD

Q9LZX5 Protein LITTLE ZIPPER 24.3e-0841.24Show/hide
Query:  TPSYLACRHHRRRP------VRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        TP+  +  +H +        +R+ +L RR R  KE+        EME++NLKL++ENQSII ENE L+KKA LLH EN  L + L     Y P  +S
Subjt:  TPSYLACRHHRRRP------VRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding2.8e-1048.35Show/hide
Query:  MCHSS--RFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        MC SS   F  TP+ L      +  VR+  L RR R  +EE        +ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ
Subjt:  MCHSS--RFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

AT3G52770.1 protein binding3.5e-0554.55Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSDYKPPQSSSD
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL Q  S  K   + S+
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSDYKPPQSSSD

AT3G60890.1 protein binding3.1e-0941.24Show/hide
Query:  TPSYLACRHHRRRP------VRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        TP+  +  +H +        +R+ +L RR R  KE+        EME++NLKL++ENQSII ENE L+KKA LLH EN  L + L     Y P  +S
Subjt:  TPSYLACRHHRRRP------VRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS

AT3G60890.2 protein binding8.9e-0938.46Show/hide
Query:  TPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS
        TP+  +  +H +   +  + LR +            + EME++NLKL++ENQSII ENE L+KKA LLH EN  L + L     Y P  +S
Subjt:  TPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCCATTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCCGCCACCATCGACGTCGCCCCGTTCGAGTTTACAGCCTTTTGAGAAGGATGAGATTCGCAAA
GGAAGAAGCGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAGAATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAG
CGTTTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTTCAGAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCGGTTGGGAAATT
AAACAAAATCATCTGTAG
mRNA sequenceShow/hide mRNA sequence
GGTGTCATTGTGATCGATCGTCTTCTAATTCTGCATTGTTCGTCATCTACTTGCTGCCCCCCTTTGCCATCATGAGTCCTACTCTCATCATTGCAATGGAAAAAACCCTC
TTTTTCTCTCTCTTCTTCCTCAATTTCCTCTTCTATTTATACTCTCAATCCCCCATTATCCGCCATTGCTAACCATTTCTCCACCTTCATACCTCCTCAATCATGTGCCA
TTCTTCCCGATTCATCCTCACTCCTTCCTATTTAGCCTGCCGCCACCATCGACGTCGCCCCGTTCGAGTTTACAGCCTTTTGAGAAGGATGAGATTCGCAAAGGAAGAAG
CGAATTCGGCCGGCGTTAAGGTAGAAATGGAGATCAAGAATTTGAAACTGTATATGGAGAATCAAAGCATTATTGAAGAGAACGAGAGATTGAGAAAGAAAGCGTTTCTT
CTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTTCAGAATTTCTCCGACTATAAACCACCGCAGTCTAGCTCCGATTTGAGTGCCTGCGGTTGGGAAATTAAACAAAA
TCATCTGTAGCGAATGAATCAAGTAGATGATTCTTCAATCTTTGATAAATTTTCTTGCTACTGATTTTTTTTTTTTCGATTTTCCTACGATTCCTTGGTTTGTAATCTGT
TATTTTGACAATAAATTAGGTTTTTGATTTTGAGGGGAAGGGAATAAAAGGGTAGAATTTGGTTATTAGGGGATAGATTTTCAGAATATAGTTTATTTGATGAAATATTA
TGAAGCAAAACTCTGTTAGTAGTTTGTACTGTTAAATTCGATCTTATCTAAATTCTCCATTGATGAAACAAATTTCATCCATTAAAGAAGCTTGGTTGGTTTGATCTTGA
AGCTGGAAAATGATTGGGTATTTTATCCTAAAACTTGAATCAAACAGGTGATACAAGGTTTTGGTTTTTTAAATATCATGAACCATTAGAAAAAAAAAATTTAAAAGTAA
ACCGTGAAAAAAATACAAATTTAGAAATTTAATTGATATAATTATAAGTTTATTTGTTAACAAAGAAAAGTTCGACATTTAAATTGAACTTAAATTGAACCCCGATTGTA
CTCGCCCTTCAAATTTATAAATATATGTGCGTGCCTGCGGCTTTCTCCTTGATTAAAGAAAACATTCACAAAGGATGTATTATACTAATGTATTATACCAAGAATTTGAA
AACAAAATACAGTATGTCTATGTGTATGTATGTGTATGTGTATATATATAAAAGTAGGTTGAACAAAGCCCTATTTTGGTTTA
Protein sequenceShow/hide protein sequence
MCHSSRFILTPSYLACRHHRRRPVRVYSLLRRMRFAKEEANSAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSDYKPPQSSSDLSACGWEI
KQNHL