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PI0003575 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003575
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:13746311..13746691
RNA-Seq ExpressionPI0003575
SyntenyPI0003575
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3056Show/hide
Query:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV
        KGLLNKSFPHYD+L YVFG+DRA GG AE+F+DIG N P GYE F +D   D +F  MYSQG++M PD +MG    + +EGR   SGSKRK  GQA +  
Subjt:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV

Query:  KIICNAMEYVNDQLKAIVEWSNVQR
         ++  A+EY N+QL  I EW  +QR
Subjt:  KIICNAMEYVNDQLKAIVEWSNVQR

KAA0048280.1 retrotransposon protein [Cucumis melo var. makuwa]2.5e-3056.8Show/hide
Query:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV
        KGLLNKSF HYD+L YVFG+DRA GG AE+F+DIGSN P GY+ F  DD +D +F  MYS G++M PD++M T   R +E RN  SGSKRK  G A +  
Subjt:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV

Query:  KIICNAMEYVNDQLKAIVEWSNVQR
         I+  AMEY N+QL  I EW  +QR
Subjt:  KIICNAMEYVNDQLKAIVEWSNVQR

KAA0056167.1 retrotransposon protein [Cucumis melo var. makuwa]3.7e-3462.18Show/hide
Query:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV
        KG+LN+SF HYD+LCYVFGRD   GG  ETF ++GSNV  GYEGF  +D NDIE PSMYSQG+DM  D++MGT P ++++GRN  S SKRK  GQ +E V
Subjt:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV

Query:  KIICNAMEYVNDQLKAIVE
        KII N++EY NDQL  IV+
Subjt:  KIICNAMEYVNDQLKAIVE

KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]6.9e-3370Show/hide
Query:  GCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMVKIICNAMEYVNDQLKAIVEWSNVQR
        GC ETF+D+GSN P GYEGF  DD ND+E P MYSQG+DML D++MGT P RSTEGR G SGSKRK GGQA+E ++II N ME+ ND+LKAIVEW NVQR
Subjt:  GCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMVKIICNAMEYVNDQLKAIVEWSNVQR

KAA0061395.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-3259.66Show/hide
Query:  GLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGF-PIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV
        GLLN+SFPHY++LCYVFGRD A GG  ETF D+ SNV   YEG    DD N+IE P+MYSQG+DM P+++MGT P R++  RN  S  KRK GGQ++E+ 
Subjt:  GLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGF-PIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV

Query:  KIICNAMEYVNDQLKAIVE
        K+IC+ MEYVNDQL   V+
Subjt:  KIICNAMEYVNDQLKAIVE

TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein5.4e-3156Show/hide
Query:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV
        KGLLNKSFPHYD+L YVFG+DRA GG AE+F+DIG N P GYE F +D   D +F  MYSQG++M PD +MG    + +EGR   SGSKRK  GQA +  
Subjt:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV

Query:  KIICNAMEYVNDQLKAIVEWSNVQR
         ++  A+EY N+QL  I EW  +QR
Subjt:  KIICNAMEYVNDQLKAIVEWSNVQR

A0A5A7TYQ6 Retrotransposon protein1.2e-3056.8Show/hide
Query:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV
        KGLLNKSF HYD+L YVFG+DRA GG AE+F+DIGSN P GY+ F  DD +D +F  MYS G++M PD++M T   R +E RN  SGSKRK  G A +  
Subjt:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV

Query:  KIICNAMEYVNDQLKAIVEWSNVQR
         I+  AMEY N+QL  I EW  +QR
Subjt:  KIICNAMEYVNDQLKAIVEWSNVQR

A0A5A7UNI7 Retrotransposon protein1.8e-3462.18Show/hide
Query:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV
        KG+LN+SF HYD+LCYVFGRD   GG  ETF ++GSNV  GYEGF  +D NDIE PSMYSQG+DM  D++MGT P ++++GRN  S SKRK  GQ +E V
Subjt:  KGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV

Query:  KIICNAMEYVNDQLKAIVE
        KII N++EY NDQL  IV+
Subjt:  KIICNAMEYVNDQLKAIVE

A0A5A7V469 Retrotransposon protein3.4e-3370Show/hide
Query:  GCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMVKIICNAMEYVNDQLKAIVEWSNVQR
        GC ETF+D+GSN P GYEGF  DD ND+E P MYSQG+DML D++MGT P RSTEGR G SGSKRK GGQA+E ++II N ME+ ND+LKAIVEW NVQR
Subjt:  GCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMVKIICNAMEYVNDQLKAIVEWSNVQR

A0A5D3CX17 Retrotransposon protein1.7e-3259.66Show/hide
Query:  GLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGF-PIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV
        GLLN+SFPHY++LCYVFGRD A GG  ETF D+ SNV   YEG    DD N+IE P+MYSQG+DM P+++MGT P R++  RN  S  KRK GGQ++E+ 
Subjt:  GLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGF-PIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMV

Query:  KIICNAMEYVNDQLKAIVE
        K+IC+ MEYVNDQL   V+
Subjt:  KIICNAMEYVNDQLKAIVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGCCTACTAAACAAATCCTTTCCCCATTACGACGACCTATGCTACGTATTTGGAAGAGATCGTGCAATAGGAGGGTGCGCTGAAACCTTCTCCGATATTGGGTC
GAATGTGCCTAGAGGATACGAGGGATTTCCCATCGACGACAACAACGACATAGAGTTCCCCTCGATGTATAGTCAGGGAGTAGACATGTTGCCTGACAACGTAATGGGCA
CACTACCCTATCGCTCAACTGAGGGTAGGAATGGTTTGAGCGGGTCGAAGAGGAAGCATGGAGGTCAGGCGTTAGAAATGGTGAAAATCATTTGCAATGCGATGGAGTAT
GTGAATGATCAACTGAAGGCCATTGTAGAATGGTCGAATGTACAACGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGCCTACTAAACAAATCCTTTCCCCATTACGACGACCTATGCTACGTATTTGGAAGAGATCGTGCAATAGGAGGGTGCGCTGAAACCTTCTCCGATATTGGGTC
GAATGTGCCTAGAGGATACGAGGGATTTCCCATCGACGACAACAACGACATAGAGTTCCCCTCGATGTATAGTCAGGGAGTAGACATGTTGCCTGACAACGTAATGGGCA
CACTACCCTATCGCTCAACTGAGGGTAGGAATGGTTTGAGCGGGTCGAAGAGGAAGCATGGAGGTCAGGCGTTAGAAATGGTGAAAATCATTTGCAATGCGATGGAGTAT
GTGAATGATCAACTGAAGGCCATTGTAGAATGGTCGAATGTACAACGATAA
Protein sequenceShow/hide protein sequence
MKGLLNKSFPHYDDLCYVFGRDRAIGGCAETFSDIGSNVPRGYEGFPIDDNNDIEFPSMYSQGVDMLPDNVMGTLPYRSTEGRNGLSGSKRKHGGQALEMVKIICNAMEY
VNDQLKAIVEWSNVQR