; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003584 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003584
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:6297457..6299019
RNA-Seq ExpressionPI0003584
SyntenyPI0003584
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036942.1 uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]1.4e-16763Show/hide
Query:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------
        MAPDRLDLQR+EK+SSESFKEYAQRWRD  AEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDII                              
Subjt:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------

Query:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN
                          +KS FGQR++EQ FPSYI+NVSH+PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQN
Subjt:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN

Query:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM
        RQLA IPMIPIQP                   GHSTENCLALKR VQSLINAGWLSFKK+ EK +V  NPLP+HEN KVNVVD   E+C+ EVHEI MPM
Subjt:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM

Query:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTV
        EALFE LFEAGYV  EYLDPN+RYE               GHV+QQC KFR KVQQLMD+KILTVY+GQGK+E+  SKIC   DEV     SFLPRPLTV
Subjt:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTV

Query:  FYQENRNEST-FYNPKTLTIQ-------------------------------ESVG-TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEM
        FYQE+RNEST F NPK LTIQ                               E  G TRSGRCYKPD+LT PS+G+IL Q RKNEKR   EHCK+QDVEM
Subjt:  FYQENRNEST-FYNPKTLTIQ-------------------------------ESVG-TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEM

Query:  PIIAKDVGYKKPVTDEEANEFLKLVKQ
        PI+AKD+ YKK VTDEEANEFLK+VKQ
Subjt:  PIIAKDVGYKKPVTDEEANEFLKLVKQ

KAA0036950.1 uncharacterized protein E6C27_scaffold86G00300 [Cucumis melo var. makuwa]1.4e-16763.31Show/hide
Query:  DRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII---------------------------------
        +RLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDII                                 
Subjt:  DRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII---------------------------------

Query:  --------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQL
                       +KS FGQR++EQ FPSYI+NVSH+PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQNRQL
Subjt:  --------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQL

Query:  APIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEAL
        A IPMIPIQP                   GHSTENCLALKR VQSLINA WLSFKK+ EK +VN NPLP+HEN KVNVVD   E+CK EVHEI MPMEAL
Subjt:  APIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEAL

Query:  FESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQ
        FE LFEAGYV  EYLDPN+RYE               GHV+QQC KFR KVQQLMD+KILTVY+GQGK+E+ DSKIC   DEV     SFLPRPLTVFYQ
Subjt:  FESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQ

Query:  ENRNEST-FYNPKTLTIQE--------------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPII
        E+ NEST F NPK LTIQ                                 S  TRSGRCYKPD+LT PS+G+IL Q RKNEKR   EHCK+QDVEMPII
Subjt:  ENRNEST-FYNPKTLTIQE--------------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPII

Query:  AKDVGYKKPVTDEEANEFLKLVKQSE
        AKD+ YKK VTDEEANEFLK+VKQSE
Subjt:  AKDVGYKKPVTDEEANEFLKLVKQSE

KAA0060421.1 uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]2.3e-16564.36Show/hide
Query:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------
        MAP+RLDLQRMEK+SSESFKEYAQRW+D  AEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDII                              
Subjt:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------

Query:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN
                          +KS FGQR++EQ FPSYI+NVS++PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQN
Subjt:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN

Query:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM
        RQLAPIPMIPIQP                   GHSTENC ALKR VQSLINAGWLSFKK+ EKP+VN NPLPNHEN KVN VD   E+CK EVHEI MPM
Subjt:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM

Query:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTV
        EALFE LFEAGYV  EYLDPN+RYE               GHV+QQC KFR KVQQLMD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTV
Subjt:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTV

Query:  FYQENRNEST-FYNPKTLTIQ----------ESVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFL
        FYQE+ NEST F NPK LTIQ          ++V  R       D+LT PSDG+IL Q RKNEKR V E+CK+QDVEMPIIAKD+ YKK VTDEEANEFL
Subjt:  FYQENRNEST-FYNPKTLTIQ----------ESVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFL

Query:  KLVKQ
        K+VKQ
Subjt:  KLVKQ

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]3.0e-16565.41Show/hide
Query:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDI---------------IG------NKSSFGQR
        MAPDRLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMTSMFMNTLR PFY+RMI  ATT +  I               IG      +KS FGQR
Subjt:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDI---------------IG------NKSSFGQR

Query:  EHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPIQPLIQN---------
        ++EQ FPSYI+NVS++PYN+YV AHT S T +PVNSNSP+PF Q QGSK NSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPI+P             
Subjt:  EHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPIQPLIQN---------

Query:  ------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEALFESLFEAGYVDKEYLDPNVRYE-
              GHSTENCLALKRKVQSLINAGWLSFKK+ EKP+VN NPL +HEN KVNVVD   E+CK EVHEI MPMEA    LFEAGYV  EYLDPN+RYE 
Subjt:  ------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEALFESLFEAGYVDKEYLDPNVRYE-

Query:  --------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQE----
                      GHV+QQC KFR KVQ+LMD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F NPK LTIQ     
Subjt:  --------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQE----

Query:  ----------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFLKLVK
                                    S  TRSGRCYKPD+LT P DG+IL Q RKNEK  V EHCK+QDVEMPIIAKD+ YKK VTDEEANEFLK+VK
Subjt:  ----------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFLKLVK

Query:  QSE
        QSE
Subjt:  QSE

XP_031739260.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402917 [Cucumis sativus]2.5e-16460.98Show/hide
Query:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------
        MAPDRLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMT MFMNTLR PFYDRMIGNATT+FSDII                              
Subjt:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------

Query:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN
                          +KS+FGQR+H+Q FPSYI+NV+H+PYNNYVP H+ SG  + VNSN  RPF QGQGSK NS+T+RFDPIPMTYTELLPQL+ N
Subjt:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN

Query:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM
        RQLAPIP+ PIQP                   GHSTENCLALKRKVQSLINAGWLSFKKA EKPDVNNNPLPNHENSKVN +DCF  +CK EVHEIRMPM
Subjt:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM

Query:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEVS-----FLPRPLTV
        E LFE LFEAGYV  EYLDPN+RYE               GH IQ+C  FR KVQQ MD+KILTVY+GQGK+E+ D+KIC    EV+     FLPRPLTV
Subjt:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEVS-----FLPRPLTV

Query:  FYQENRNESTFYNPKTLTIQE--------------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMP
        FYQENRN+S+  NPK L ++                                 S  TRSGRCYKPD+LT PS  + LGQ RK+EKR VNEH KEQDVEM 
Subjt:  FYQENRNESTFYNPKTLTIQE--------------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMP

Query:  IIAKDVGYKKPVTDEEANEFLKLVKQSE
        +IAKD+  KKPVTDE ANEFLK+VKQSE
Subjt:  IIAKDVGYKKPVTDEEANEFLKLVKQSE

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein6.9e-16863Show/hide
Query:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------
        MAPDRLDLQR+EK+SSESFKEYAQRWRD  AEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDII                              
Subjt:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------

Query:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN
                          +KS FGQR++EQ FPSYI+NVSH+PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQN
Subjt:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN

Query:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM
        RQLA IPMIPIQP                   GHSTENCLALKR VQSLINAGWLSFKK+ EK +V  NPLP+HEN KVNVVD   E+C+ EVHEI MPM
Subjt:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM

Query:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTV
        EALFE LFEAGYV  EYLDPN+RYE               GHV+QQC KFR KVQQLMD+KILTVY+GQGK+E+  SKIC   DEV     SFLPRPLTV
Subjt:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTV

Query:  FYQENRNEST-FYNPKTLTIQ-------------------------------ESVG-TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEM
        FYQE+RNEST F NPK LTIQ                               E  G TRSGRCYKPD+LT PS+G+IL Q RKNEKR   EHCK+QDVEM
Subjt:  FYQENRNEST-FYNPKTLTIQ-------------------------------ESVG-TRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEM

Query:  PIIAKDVGYKKPVTDEEANEFLKLVKQ
        PI+AKD+ YKK VTDEEANEFLK+VKQ
Subjt:  PIIAKDVGYKKPVTDEEANEFLKLVKQ

A0A5A7T0R1 Uncharacterized protein6.9e-16863.31Show/hide
Query:  DRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII---------------------------------
        +RLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDII                                 
Subjt:  DRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII---------------------------------

Query:  --------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQL
                       +KS FGQR++EQ FPSYI+NVSH+PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQNRQL
Subjt:  --------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQL

Query:  APIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEAL
        A IPMIPIQP                   GHSTENCLALKR VQSLINA WLSFKK+ EK +VN NPLP+HEN KVNVVD   E+CK EVHEI MPMEAL
Subjt:  APIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEAL

Query:  FESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQ
        FE LFEAGYV  EYLDPN+RYE               GHV+QQC KFR KVQQLMD+KILTVY+GQGK+E+ DSKIC   DEV     SFLPRPLTVFYQ
Subjt:  FESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQ

Query:  ENRNEST-FYNPKTLTIQE--------------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPII
        E+ NEST F NPK LTIQ                                 S  TRSGRCYKPD+LT PS+G+IL Q RKNEKR   EHCK+QDVEMPII
Subjt:  ENRNEST-FYNPKTLTIQE--------------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPII

Query:  AKDVGYKKPVTDEEANEFLKLVKQSE
        AKD+ YKK VTDEEANEFLK+VKQSE
Subjt:  AKDVGYKKPVTDEEANEFLKLVKQSE

A0A5A7V3W7 Retrotrans_gag domain-containing protein1.1e-16564.36Show/hide
Query:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------
        MAP+RLDLQRMEK+SSESFKEYAQRW+D  AEVQPPLTDKEMTSMFMNTLR PFY+RMIGNA+T+FSDII                              
Subjt:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDII------------------------------

Query:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN
                          +KS FGQR++EQ FPSYI+NVS++PYN+YVPAHT S T +PVNSNSPRPF QGQGSK NSDTWRFDPIPMTYTELLPQLIQN
Subjt:  -----------------GNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQN

Query:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM
        RQLAPIPMIPIQP                   GHSTENC ALKR VQSLINAGWLSFKK+ EKP+VN NPLPNHEN KVN VD   E+CK EVHEI MPM
Subjt:  RQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPM

Query:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTV
        EALFE LFEAGYV  EYLDPN+RYE               GHV+QQC KFR KVQQLMD+KILTVY+GQ K+E+ DSK+CA  DEV     SFLPRPLTV
Subjt:  EALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTV

Query:  FYQENRNEST-FYNPKTLTIQ----------ESVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFL
        FYQE+ NEST F NPK LTIQ          ++V  R       D+LT PSDG+IL Q RKNEKR V E+CK+QDVEMPIIAKD+ YKK VTDEEANEFL
Subjt:  FYQENRNEST-FYNPKTLTIQ----------ESVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFL

Query:  KLVKQ
        K+VKQ
Subjt:  KLVKQ

A0A5A7VIM6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein3.5e-16466.8Show/hide
Query:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIGNKSSFGQREHEQGFPSYINNVSHVPYNNY
        MAPDRLDLQ+MEK+SSESFKEYAQRWRD AAEVQPPLTDKEMTSMFMNTLR PFY+RMIG           +KS FGQR++EQ FPSYI+NVS++PYN+Y
Subjt:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIGNKSSFGQREHEQGFPSYINNVSHVPYNNY

Query:  VPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQ
        V AHT S T +PVNSNSP+PF + QGSK NSDTWRFDPIPMTY ELL QLIQNRQLA IPMIPI+P                   GHSTENCLALKRKVQ
Subjt:  VPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPIQPLIQN---------------GHSTENCLALKRKVQ

Query:  SLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQC
        SLINAGWLSFKK+ EKP+VN NPL +HEN KVNVVD   E+CK EVHEI MPMEALFE LFEAGYV  EYLDPN+RYE               GHV+QQC
Subjt:  SLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEALFESLFEAGYVDKEYLDPNVRYE---------------GHVIQQC

Query:  YKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQE-------------------------
         KFR KVQQLMD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F N K LTIQ                          
Subjt:  YKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQE-------------------------

Query:  -------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFLKLVKQSE
               S  TRSGRCYKPD+LT P DG+IL Q RKNEK  V EHCK+QDVEMPIIAKD+ YKK VTDEEANEFLK+VKQSE
Subjt:  -------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFLKLVKQSE

A0A5D3DEB3 Retrotrans_gag domain-containing protein1.4e-16565.41Show/hide
Query:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDI---------------IG------NKSSFGQR
        MAPDRLDLQRMEK+SSESFKEYAQRWRD AAEVQPPLTDKEMTSMFMNTLR PFY+RMI  ATT +  I               IG      +KS FGQR
Subjt:  MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDI---------------IG------NKSSFGQR

Query:  EHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPIQPLIQN---------
        ++EQ FPSYI+NVS++PYN+YV AHT S T +PVNSNSP+PF Q QGSK NSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPI+P             
Subjt:  EHEQGFPSYINNVSHVPYNNYVPAHTFSGTSRPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPIQPLIQN---------

Query:  ------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEALFESLFEAGYVDKEYLDPNVRYE-
              GHSTENCLALKRKVQSLINAGWLSFKK+ EKP+VN NPL +HEN KVNVVD   E+CK EVHEI MPMEA    LFEAGYV  EYLDPN+RYE 
Subjt:  ------GHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVVDCFDEECKKEVHEIRMPMEALFESLFEAGYVDKEYLDPNVRYE-

Query:  --------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQE----
                      GHV+QQC KFR KVQ+LMD+KILTVY+GQGK+E+ DSKICA  DEV     SFLPRPLTVFYQE+ NEST F NPK LTIQ     
Subjt:  --------------GHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEV-----SFLPRPLTVFYQENRNEST-FYNPKTLTIQE----

Query:  ----------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFLKLVK
                                    S  TRSGRCYKPD+LT P DG+IL Q RKNEK  V EHCK+QDVEMPIIAKD+ YKK VTDEEANEFLK+VK
Subjt:  ----------------------------SVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFLKLVK

Query:  QSE
        QSE
Subjt:  QSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAGATCGTTTAGACTTGCAACGGATGGAGAAGAGGAGTTCTGAAAGTTTCAAAGAATATGCTCAACGATGGAGAGACAAGGCCGCTGAGGTTCAGCCACCGTT
AACAGACAAAGAAATGACATCTATGTTTATGAATACTTTACGAACTCCATTCTATGATCGGATGATTGGTAATGCAACAACGAGCTTTTCTGACATTATTGGAAACAAAT
CGAGTTTTGGGCAAAGAGAACATGAGCAAGGTTTTCCATCATATATAAACAATGTTTCTCATGTCCCTTACAACAACTATGTACCAGCTCACACCTTCTCTGGAACTTCA
AGGCCTGTTAACTCAAACTCTCCTCGACCATTTGCACAAGGTCAAGGTAGCAAAGCCAATTCAGATACTTGGCGATTTGATCCAATTCCCATGACCTATACAGAGCTTTT
ACCCCAACTAATTCAAAATCGACAGTTAGCTCCTATTCCAATGATCCCTATACAACCTCTTATCCAAAATGGACACTCAACTGAAAATTGTTTGGCTTTGAAAAGGAAGG
TGCAATCTTTGATTAATGCTGGATGGTTAAGCTTTAAGAAAGCTAGTGAGAAGCCAGATGTCAATAATAATCCACTCCCTAATCATGAAAATTCAAAGGTGAATGTTGTG
GATTGCTTTGACGAAGAGTGTAAAAAAGAGGTTCATGAGATAAGGATGCCCATGGAAGCACTTTTTGAAAGTCTTTTTGAAGCAGGATATGTTGATAAGGAATATTTAGA
CCCCAATGTAAGATATGAAGGTCATGTTATTCAACAGTGCTACAAGTTTAGATTCAAAGTACAACAACTTATGGATGCAAAGATACTCACGGTATATAAGGGACAAGGAA
AAGAGGAGGTGAATGACAGTAAAATATGTGCATCAACGGATGAGGTTTCCTTTTTACCAAGGCCTTTAACGGTTTTCTATCAAGAAAATCGTAATGAGTCAACTTTCTAC
AATCCTAAAACACTCACGATCCAAGAATCAGTGGGAACTCGAAGTGGAAGATGTTACAAACCAGATGATTTGACAGAACCTTCAGATGGTGTGATACTGGGGCAAAGGAG
GAAAAATGAAAAAAGAATTGTGAATGAACATTGCAAAGAGCAGGATGTGGAGATGCCCATCATAGCTAAGGATGTAGGATACAAAAAGCCTGTTACCGATGAGGAAGCAA
ACGAATTCTTGAAATTAGTAAAACAAAGTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCAGATCGTTTAGACTTGCAACGGATGGAGAAGAGGAGTTCTGAAAGTTTCAAAGAATATGCTCAACGATGGAGAGACAAGGCCGCTGAGGTTCAGCCACCGTT
AACAGACAAAGAAATGACATCTATGTTTATGAATACTTTACGAACTCCATTCTATGATCGGATGATTGGTAATGCAACAACGAGCTTTTCTGACATTATTGGAAACAAAT
CGAGTTTTGGGCAAAGAGAACATGAGCAAGGTTTTCCATCATATATAAACAATGTTTCTCATGTCCCTTACAACAACTATGTACCAGCTCACACCTTCTCTGGAACTTCA
AGGCCTGTTAACTCAAACTCTCCTCGACCATTTGCACAAGGTCAAGGTAGCAAAGCCAATTCAGATACTTGGCGATTTGATCCAATTCCCATGACCTATACAGAGCTTTT
ACCCCAACTAATTCAAAATCGACAGTTAGCTCCTATTCCAATGATCCCTATACAACCTCTTATCCAAAATGGACACTCAACTGAAAATTGTTTGGCTTTGAAAAGGAAGG
TGCAATCTTTGATTAATGCTGGATGGTTAAGCTTTAAGAAAGCTAGTGAGAAGCCAGATGTCAATAATAATCCACTCCCTAATCATGAAAATTCAAAGGTGAATGTTGTG
GATTGCTTTGACGAAGAGTGTAAAAAAGAGGTTCATGAGATAAGGATGCCCATGGAAGCACTTTTTGAAAGTCTTTTTGAAGCAGGATATGTTGATAAGGAATATTTAGA
CCCCAATGTAAGATATGAAGGTCATGTTATTCAACAGTGCTACAAGTTTAGATTCAAAGTACAACAACTTATGGATGCAAAGATACTCACGGTATATAAGGGACAAGGAA
AAGAGGAGGTGAATGACAGTAAAATATGTGCATCAACGGATGAGGTTTCCTTTTTACCAAGGCCTTTAACGGTTTTCTATCAAGAAAATCGTAATGAGTCAACTTTCTAC
AATCCTAAAACACTCACGATCCAAGAATCAGTGGGAACTCGAAGTGGAAGATGTTACAAACCAGATGATTTGACAGAACCTTCAGATGGTGTGATACTGGGGCAAAGGAG
GAAAAATGAAAAAAGAATTGTGAATGAACATTGCAAAGAGCAGGATGTGGAGATGCCCATCATAGCTAAGGATGTAGGATACAAAAAGCCTGTTACCGATGAGGAAGCAA
ACGAATTCTTGAAATTAGTAAAACAAAGTGAATAA
Protein sequenceShow/hide protein sequence
MAPDRLDLQRMEKRSSESFKEYAQRWRDKAAEVQPPLTDKEMTSMFMNTLRTPFYDRMIGNATTSFSDIIGNKSSFGQREHEQGFPSYINNVSHVPYNNYVPAHTFSGTS
RPVNSNSPRPFAQGQGSKANSDTWRFDPIPMTYTELLPQLIQNRQLAPIPMIPIQPLIQNGHSTENCLALKRKVQSLINAGWLSFKKASEKPDVNNNPLPNHENSKVNVV
DCFDEECKKEVHEIRMPMEALFESLFEAGYVDKEYLDPNVRYEGHVIQQCYKFRFKVQQLMDAKILTVYKGQGKEEVNDSKICASTDEVSFLPRPLTVFYQENRNESTFY
NPKTLTIQESVGTRSGRCYKPDDLTEPSDGVILGQRRKNEKRIVNEHCKEQDVEMPIIAKDVGYKKPVTDEEANEFLKLVKQSE