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PI0003586 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003586
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr06:25464716..25464907
RNA-Seq ExpressionPI0003586
SyntenyPI0003586
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]7.8e-1772.58Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQ
        MA+SSRA KH WTK+EEA LVECLVELVS  GWRSDNGTFR GY + LQ+MMAE++ + NIQ
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQ

KAA0052259.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-1663.49Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQA
        M+TS+RAP+H+WTK+EE TLVECL+ELVS+ GW+SDNGTFRPGY + L +MMAE++  + ++A
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQA

KAA0066605.1 retrotransposon protein [Cucumis melo var. makuwa]3.2e-1874.19Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQ
        MA+SSRAPKH WTK+EEA LVECLVELVS  GWRS+NGTFRPGY + LQ+MMAE++ + NIQ
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQ

KAA0066807.1 retrotransposon protein [Cucumis melo var. makuwa]5.0e-1667.24Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSE
        M+TS+RAP+H+WTK+EE TLVECL++LVS+ GW+SDNGTFRPGY + L +MMAE++ E
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSE

TYK24214.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-1774.14Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSE
        MA+SSRAP HLWTK+E+AT VECLVELV+ DGWRSDNGTFRP YHS L +MMA++M +
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSE

TrEMBL top hitse value%identityAlignment
A0A5A7UFK7 Retrotransposon protein8.4e-1763.49Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQA
        M+TS+RAP+H+WTK+EE TLVECL+ELVS+ GW+SDNGTFRPGY + L +MMAE++  + ++A
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQA

A0A5A7VI45 Retrotransposon protein2.4e-1667.24Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSE
        M+TS+RAP+H+WTK+EE TLVECL++LVS+ GW+SDNGTFRPGY + L +MMAE++ E
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSE

A0A5D3BZU3 Retrotransposon protein3.8e-1772.58Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQ
        MA+SSRA KH WTK+EEA LVECLVELVS  GWRSDNGTFR GY + LQ+MMAE++ + NIQ
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQ

A0A5D3CQS4 Retrotransposon protein1.5e-1874.19Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQ
        MA+SSRAPKH WTK+EEA LVECLVELVS  GWRS+NGTFRPGY + LQ+MMAE++ + NIQ
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQ

A0A5D3DKT3 Retrotransposon protein9.9e-1874.14Show/hide
Query:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSE
        MA+SSRAP HLWTK+E+AT VECLVELV+ DGWRSDNGTFRP YHS L +MMA++M +
Subjt:  MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTCTTCAAGGGCCCCAAAACACCTATGGACGAAAAAGGAGGAGGCCACCCTTGTTGAATGCCTGGTAGAGTTGGTATCCGTTGATGGCTGGAGGTCAGACAA
CGGGACGTTTAGGCCCGGTTACCATAGTCATCTGCAGAAAATGATGGCTGAGAGGATGTCAGAACATAACATACAGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTCTTCAAGGGCCCCAAAACACCTATGGACGAAAAAGGAGGAGGCCACCCTTGTTGAATGCCTGGTAGAGTTGGTATCCGTTGATGGCTGGAGGTCAGACAA
CGGGACGTTTAGGCCCGGTTACCATAGTCATCTGCAGAAAATGATGGCTGAGAGGATGTCAGAACATAACATACAGGCTTAA
Protein sequenceShow/hide protein sequence
MATSSRAPKHLWTKKEEATLVECLVELVSVDGWRSDNGTFRPGYHSHLQKMMAERMSEHNIQA