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PI0003604 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003604
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr04:19616071..19616698
RNA-Seq ExpressionPI0003604
SyntenyPI0003604
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]2.7e-0653.85Show/hide
Query:  PLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        P +Q G+I+EQVGERV+YDAAS REARLS+F      W   RV      + +I LWE+VQ V PC
Subjt:  PLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.0e-0549.37Show/hide
Query:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        +EVG G    +   P +Q   I+EQVGERV+YDAAS REARLSEF      W   RV      I +I LW++VQ V PC
Subjt:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]2.3e-0545.57Show/hide
Query:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        ++VG G    +   P + +G+I+EQVGERV+YDAAS R+ARLS+F      W   RV      + +I LWE+VQ V PC
Subjt:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]2.7e-0653.85Show/hide
Query:  PLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        P +Q G+I+EQVGERV+YDAAS REARLS+F      W   RV      + +I LWE+VQ V PC
Subjt:  PLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

TYK26659.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]2.3e-0545.57Show/hide
Query:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        ++VG G    +   P + +G+I+EQVGERV+YDAAS R+ARLS+F      W   RV      + +I LWE+VQ V PC
Subjt:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein1.3e-0653.85Show/hide
Query:  PLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        P +Q G+I+EQVGERV+YDAAS REARLS+F      W   RV      + +I LWE+VQ V PC
Subjt:  PLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein4.9e-0649.37Show/hide
Query:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        +EVG G    +   P +Q   I+EQVGERV+YDAAS REARLSEF      W   RV      I +I LW++VQ V PC
Subjt:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

A0A5A7V3Z0 Reverse transcriptase domain-containing protein1.1e-0545.57Show/hide
Query:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        ++VG G    +   P + +G+I+EQVGERV+YDAAS R+ARLS+F      W   RV      + +I LWE+VQ V PC
Subjt:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

A0A5D3BDZ6 Zf-RVT domain-containing protein1.3e-0653.85Show/hide
Query:  PLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        P +Q G+I+EQVGERV+YDAAS REARLS+F      W   RV      + +I LWE+VQ V PC
Subjt:  PLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

A0A5D3DT54 Zf-RVT domain-containing protein1.1e-0545.57Show/hide
Query:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC
        ++VG G    +   P + +G+I+EQVGERV+YDAAS R+ARLS+F      W   RV      + +I LWE+VQ V PC
Subjt:  VEVGMGGGVEM-ARPLVQDGSIIEQVGERVVYDAASSREARLSEF-----HWFGWRVEVAEGVIGVIFLWEKVQGVHPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGGACAGCTCAACAGTAGTGGCCCATAGCGGGATAGTTGAGGTTGGGATGGGAGGCGGTGTAGAGATGGCTCGACCATTGGTGCAGGATGGCTCGATCATCGA
GCAGGTGGGGGAGAGGGTGGTGTATGATGCTGCAAGTAGTAGGGAGGCCAGACTATCGGAGTTTCATTGGTTTGGATGGAGAGTGGAGGTGGCCGAGGGTGTCATTGGAG
TTATATTTTTGTGGGAAAAAGTTCAGGGGGTTCATCCGTGTCCAGTGTCAGGGATCGGTGGTGTGGGTGGTTGGATAAAAGAGGGTTTGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGGACAGCTCAACAGTAGTGGCCCATAGCGGGATAGTTGAGGTTGGGATGGGAGGCGGTGTAGAGATGGCTCGACCATTGGTGCAGGATGGCTCGATCATCGA
GCAGGTGGGGGAGAGGGTGGTGTATGATGCTGCAAGTAGTAGGGAGGCCAGACTATCGGAGTTTCATTGGTTTGGATGGAGAGTGGAGGTGGCCGAGGGTGTCATTGGAG
TTATATTTTTGTGGGAAAAAGTTCAGGGGGTTCATCCGTGTCCAGTGTCAGGGATCGGTGGTGTGGGTGGTTGGATAAAAGAGGGTTTGATGTAA
Protein sequenceShow/hide protein sequence
MGEDSSTVVAHSGIVEVGMGGGVEMARPLVQDGSIIEQVGERVVYDAASSREARLSEFHWFGWRVEVAEGVIGVIFLWEKVQGVHPCPVSGIGGVGGWIKEGLM