| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0059617.1 DNA-directed RNA polymerases II and IV subunit 5A [Cucumis melo var. makuwa] | 2.4e-109 | 97.66 | Show/hide |
Query: SQIARNKMVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSE
+++A NKMVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSE
Subjt: SQIARNKMVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSE
Query: NVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRP
NVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRP
Subjt: NVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRP
Query: SETAGRYVTYRYVV
SETAGRYVTYRYVV
Subjt: SETAGRYVTYRYVV
|
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| XP_004148944.1 DNA-directed RNA polymerases II and IV subunit 5A [Cucumis sativus] | 3.5e-108 | 100 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Query: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| XP_008451219.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Cucumis melo] | 1.7e-107 | 99.52 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Query: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| XP_022143609.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Momordica charantia] | 1.2e-97 | 91.3 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
MVLSEEEITRLFRIRKTV QML+DR YFVGDFEIDM+REQFK KYGENMKREDIVINK++RNDSSDQIYVFFPEE KVG+K +KTYT RMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Query: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFAR C+SE +SK FHLEVFQEAELLVNIKDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| XP_022991826.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita maxima] | 1.2e-97 | 90.82 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
MVLSEEEITRLFRIRKTV QML+DRGYFVGDFEIDM+REQFK KYGE+MKREDIVINK+KRNDSSDQIYVFFPEE KVG+K +KTYT RMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Query: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFAR C+SE +SK FHLEVFQEAELLVN+KDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K8L9 Uncharacterized protein | 1.7e-108 | 100 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Query: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A1S3BS23 DNA-directed RNA polymerases II and IV subunit 5A | 8.4e-108 | 99.52 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Query: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A5D3C9X8 DNA-directed RNA polymerases II and IV subunit 5A | 1.2e-109 | 97.66 | Show/hide |
Query: SQIARNKMVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSE
+++A NKMVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSE
Subjt: SQIARNKMVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSE
Query: NVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRP
NVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRP
Subjt: NVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRP
Query: SETAGRYVTYRYVV
SETAGRYVTYRYVV
Subjt: SETAGRYVTYRYVV
|
|
| A0A6J1CPU1 DNA-directed RNA polymerases II and IV subunit 5A-like | 6.0e-98 | 91.3 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
MVLSEEEITRLFRIRKTV QML+DR YFVGDFEIDM+REQFK KYGENMKREDIVINK++RNDSSDQIYVFFPEE KVG+K +KTYT RMKSENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Query: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFAR C+SE +SK FHLEVFQEAELLVNIKDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| A0A6J1JRV4 DNA-directed RNA polymerases II and IV subunit 5A-like | 6.0e-98 | 90.82 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
MVLSEEEITRLFRIRKTV QML+DRGYFVGDFEIDM+REQFK KYGE+MKREDIVINK+KRNDSSDQIYVFFPEE KVG+K +KTYT RMK+ENVFRAIL
Subjt: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAIL
Query: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VVQQNLTPFAR C+SE +SK FHLEVFQEAELLVN+KDHVLVPEHQLL NEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Subjt: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
VTYRYVV
Subjt: VTYRYVV
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.2e-54 | 53.14 | Show/hide |
Query: EEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGE-----NMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAI
EEE RL++IRKT+ Q+ DRGY V E+D T E+FK ++G+ +R D+ + + +D +DQ++VFFPEE KVGIK +K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGE-----NMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAI
Query: LVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
+VVQQ +TP A+ + + K + LE F + ELL+NI +H LVPEH ++ EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGR
Subjt: LVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 1.4e-88 | 78.64 | Show/hide |
Query: VLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILV
+L+EEE+ RL+RI+KT+ QMLRDRGYF+ D E+ MT++QF +K+G+NMKRED+V K+KRND+SDQ+Y+FFP+EAKVG+K +K YT RMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILV
Query: VQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VQQNLTPFAR C+SE +SK FHLEVFQEAE+LVNIK+HVLVPEHQ+L EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYV
Subjt: VQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 1.5e-53 | 52.66 | Show/hide |
Query: EEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGE-----NMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAI
EEE RL++IRKT+ Q+ DRGY V E+D T E+F+ ++G+ +R D+ + + +D +DQ++VFFPEE KVGIK +K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGE-----NMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAI
Query: LVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
+VVQQ +TP A+ + + K + LE F + ELL+NI +H LVPEH ++ EE LL RY ++E QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGR
Subjt: LVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.2e-54 | 53.14 | Show/hide |
Query: EEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGE-----NMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAI
EEE RL++IRKT+ Q+ DRGY V E+D T E+FK ++G+ +R D+ + + +D +DQ++VFFPEE KVGIK +K Y RM+ EN+ RA+
Subjt: EEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGE-----NMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAI
Query: LVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
+VVQQ +TP A+ + + K + LE F + ELL+NI +H LVPEH ++ EE LL RY ++E+QLPRIQ DPVARY+G+KRGQVVKIIRPSETAGR
Subjt: LVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGR
Query: YVTYRYV
Y+TYR V
Subjt: YVTYRYV
|
|
| Q9N5K2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 2.6e-53 | 53.77 | Show/hide |
Query: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMK-----REDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENV
M E E RL+RIRKTV QM+ DRGY V E+D E FK +YG+ R D+ I + +D +DQ++VFFPE+AK+GIK +K +M+ +N+
Subjt: MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMK-----REDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENV
Query: FRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSE
RAI+VVQ +TP A+ + + K + LE F EAEL+VNI +H LVPEH ++ EEK LL RY +K++QLPRIQ DPVARY+GL+RGQVVKIIRPSE
Subjt: FRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSE
Query: TAGRYVTYRYVV
TAGRY+TYR VV
Subjt: TAGRYVTYRYVV
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 2.6e-32 | 36.74 | Show/hide |
Query: KSQIARNKMVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKS
K + + + S E + + R+T +MLRDRGY V D +I+++ +QF+ YGE+ + + I+ R DSS +I V F V + ++ + S
Subjt: KSQIARNKMVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKS
Query: -ENVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII
EN+ ILV+Q ++T + SF +E+F+ +LLVN+ HVL P+HQ+LN++EK++LL++++++E QLPR+ DP+ RYYGL+ GQV+K+
Subjt: -ENVFRAILVVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKII
Query: RPSETAGRYVTYRYV
E + +VTYR V
Subjt: RPSETAGRYVTYRYV
|
|
| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.0e-89 | 78.64 | Show/hide |
Query: VLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILV
+L+EEE+ RL+RI+KT+ QMLRDRGYF+ D E+ MT++QF +K+G+NMKRED+V K+KRND+SDQ+Y+FFP+EAKVG+K +K YT RMKSENVFRAILV
Subjt: VLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILV
Query: VQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
VQQNLTPFAR C+SE +SK FHLEVFQEAE+LVNIK+HVLVPEHQ+L EEKKTLLERYTVKETQLPRIQVTDP+ARY+GLKRGQVVKIIRPSETAGRYV
Subjt: VQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
|
|
| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 1.1e-27 | 35.64 | Show/hide |
Query: EITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSE-NVFRAILVVQQN
E R + R T F+MLRDRGY V + E+ +T +F+ +GE + E + I R+D +I V F + +K ++ ++ + + ILV+Q
Subjt: EITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSE-NVFRAILVVQQN
Query: LTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRY
+ FA+ + T+ F +E F +LLVNI H+ P+ ++LN EEK+ LL ++ +++ QLP +Q D RYYGLK+ QVVKI E G +VTYR
Subjt: LTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRY
Query: VV
++
Subjt: VV
|
|
| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 4.8e-31 | 36.76 | Show/hide |
Query: LSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVV
LS EE R + R+ QMLRDRGY V D +I+++ F+ YGE + + I+ R+DS+ ++ + F + V + +++ + S+ +++V
Subjt: LSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVV
Query: QQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
QN + SF +E+FQ +LLVNI H L P+HQ+LN+EEK TLL++++++E QLPRI D + RYYGL++GQVVK+ E +V
Subjt: QQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVT
Query: YRYV
+R V
Subjt: YRYV
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 4.5e-45 | 46.86 | Show/hide |
Query: EEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENM---KREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPL-KTYTTRMKSENVFRAIL
++EITR+F++R+TV QMLRDRGY + + ++++ RE+F Q++ + M +E + ++ +K + +D+IYVF+PE KVG+ + K +M+ + V R I+
Subjt: EEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENM---KREDIVINKSKRNDSSDQIYVFFPEEAKVGIKPL-KTYTTRMKSENVFRAIL
Query: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
VV +T AR +SE +K +EVF+EAEL+ NI +H LV ++ +L+++ KK LL YTV++TQLPRI VTDP+ARYYGLKRGQVVKI R T+ Y
Subjt: VVQQNLTPFARACMSEATSKSFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRY
Query: VTYRYVV
TYR+ V
Subjt: VTYRYVV
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