CuGenDBv2

Gene ID	PI0003621
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	chr08:970248..970709
RNA-Seq Expression	PI0003621
Synteny	PI0003621
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0034357 - photosynthetic membrane (cellular component) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR006243 - Photosystem I PsaA IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

AHM91214.1 photosystem I P700 apoprotein A1, partial [Lagenaria siceraria]

2.0e-54

75.16

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

YP_009447450.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita maxima]

2.0e-54

75.16

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

YP_009447535.1 photosystem I P700 chlorophyll a apoprotein A1 [Cucurbita moschata]

2.0e-54

75.16

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

YP_009751738.1 photosystem I P700 apoprotein A1 [Herpetospermum pedunculosum]

2.0e-54

75.16

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

YP_009752327.1 photosystem I P700 apoprotein A1 [Bryonia marmorata]

2.0e-54

75.16

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

TrEMBL top hits

e value

%identity

Alignment

A0A0S2IFS3 Photosystem I P700 chlorophyll a apoprotein A1

9.4e-55

75.16

Show/hide

Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

A0A1P8LDX9 Photosystem I P700 chlorophyll a apoprotein A1

9.4e-55

75.16

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

A0A2Z2CGB0 Photosystem I P700 chlorophyll a apoprotein A1

9.4e-55

75.16

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

A0A6H0EPU9 Photosystem I P700 chlorophyll a apoprotein A1

9.4e-55

75.16

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

X2F5B1 Photosystem I P700 chlorophyll a apoprotein A1

9.4e-55

75.16

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

SwissProt top hits

e value

%identity

Alignment

P58310 Photosystem I P700 chlorophyll a apoprotein A1

2.2e-56

73.2

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQP+FAQWIQNTHALAP ITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Q09FW1 Photosystem I P700 chlorophyll a apoprotein A1

3.1e-55

71.9

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLLV-------------CIFI----------
        MLGSLTI++AHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   ++             CIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLLV-------------CIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPS TAPGATT TSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Q0G9W2 Photosystem I P700 chlorophyll a apoprotein A1

2.4e-55

72.55

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLLV-------------CIFI----------
        MLGSLTII+AHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   ++             CIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLLV-------------CIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAPS TAPGATT TSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Q2QD89 Photosystem I P700 chlorophyll a apoprotein A1

9.7e-57

74.51

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAP ITAPGATTGTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Q6EW48 Photosystem I P700 chlorophyll a apoprotein A1

1.4e-55

71.9

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTI++AHHMY+MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQP+FAQWIQNTHALAPS TAPGAT GTSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

4.1e-18

33.55

Show/hide

Query:  LGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLC----------------YLLVCIFITIPLVQHP
        LG +T ++A HMY++P Y ++A D+ TQ +L+THH +I GF++ GA AH AIF +RDY+P    +++                   L   F T+ L  H 
Subjt:  LGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLC----------------YLLVCIFITIPLVQHP

Query:  QDMFS----DTTIQLQPVFAQWIQNTH--------ALAPSITAPGATTGTSL
          M +    +  I ++P+FAQWIQ+ H         L  S + P    G S+
Subjt:  QDMFS----DTTIQLQPVFAQWIQNTH--------ALAPSITAPGATTGTSL

ATCG00350.1 Photosystem I, PsaA/PsaB protein

2.1e-54

69.93

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Query:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------
        MLGSLTII+AHHMY+MPPYPYLATDY TQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPT RYNDL   +             VCIF+          
Subjt:  MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLL-------------VCIFI----------

Query:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG
          T+  +  PQDMFSDT IQLQPVFAQWIQNTHALAP +TAPG T  TSLTWG
Subjt:  --TIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHALAPSITAPGATTGTSLTWG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTAGGCTCTTTAACCATTATTCTAGCTCACCATATGTATGCGATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACACAACTTTCATTGTTCACACATCACAT
GTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCATGCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATTTATGTTATCTTTTGGTTT
GTATATTCATAACGATACCATTAGTGCAGCATCCCCAAGATATGTTTTCAGATACCACTATACAATTACAACCCGTCTTTGCTCAATGGATACAAAATACCCATGCTTTA
GCACCTAGTATAACGGCCCCCGGTGCAACAACAGGCACCAGTTTGACTTGGGGGGTAGTGATTTAG

mRNA sequence

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Protein sequence

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MLGSLTIILAHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLCYLLVCIFITIPLVQHPQDMFSDTTIQLQPVFAQWIQNTHAL
APSITAPGATTGTSLTWGVVI

PI0003621 (gene) of Melon (PI 482460) v1 genome