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PI0003630 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003630
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr01:18597411..18598114
RNA-Seq ExpressionPI0003630
SyntenyPI0003630
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035621.1 retrotransposon protein [Cucumis melo var. makuwa]5.6e-6460Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG
        M+  ++PG NI A+ ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK++FD WSHP AKGLLNK F HYD+L YVFG+D AT GRAE+F D+G
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG

Query:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV
        SN P G+         D + P MYS GL+MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T  E+
Subjt:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV

Query:  VRQLQ
        VR L+
Subjt:  VRQLQ

KAA0048362.1 retrotransposon protein [Cucumis melo var. makuwa]5.6e-6460Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG
        M+  ++PG NI A+ ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK++FD WSHP AKGLLNK F HYD+L YVFG+D AT GRAE+F D+G
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG

Query:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV
        SN P G+         D + P MYS GL+MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T  E+
Subjt:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV

Query:  VRQLQ
        VR L+
Subjt:  VRQLQ

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]7.2e-6459.42Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSW--SHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDD
        M+  ++P  N+ A+ ID RIK +KR F AI EMRGPTCSGFGWNDE KCI+AEK++FD W  SHP AKGLLNK FPHYD+L YVF +DHAT GRAE+F D
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSW--SHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDD

Query:  VGSNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHA
        VGSN P G+  F     +D +   MYS+GL+MSPD++M  R+ R+SE R  SSGSK+KRGG  +++ +I+R+A+EY N+QL  IAEW   QRQDA+ T  
Subjt:  VGSNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHA

Query:  EVVRQLQ
        EVVRQL+
Subjt:  EVVRQLQ

KAA0048377.1 retrotransposon protein [Cucumis melo var. makuwa]9.5e-6460Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG
        M+  ++PG NI A+ ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK++FD WSHP AKGLLNK F HYD+L YVFG+D AT GRAE+F D+G
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG

Query:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV
        SN P G+         D + P MYS GL+MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T  E+
Subjt:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV

Query:  VRQLQ
        VR L+
Subjt:  VRQLQ

KAA0065737.1 retrotransposon protein [Cucumis melo var. makuwa]7.2e-6460Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG
        M+  ++PG NI A+ ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK++FD WSHP AKGLLNK F HYD+L YVFG+D AT GRAE+F D+G
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG

Query:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV
        SN P G+  F      D + P MYS GL+MSPDD+M  R+ R+SE R  SS SKRKR G A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T  ++
Subjt:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV

Query:  VRQLQ
        VRQL+
Subjt:  VRQLQ

TrEMBL top hitse value%identityAlignment
A0A5A7TXU5 Retrotransposon protein2.7e-6460Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG
        M+  ++PG NI A+ ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK++FD WSHP AKGLLNK F HYD+L YVFG+D AT GRAE+F D+G
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG

Query:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV
        SN P G+         D + P MYS GL+MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T  E+
Subjt:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV

Query:  VRQLQ
        VR L+
Subjt:  VRQLQ

A0A5A7TZA5 Retrotransposon protein3.5e-6459.42Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSW--SHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDD
        M+  ++P  N+ A+ ID RIK +KR F AI EMRGPTCSGFGWNDE KCI+AEK++FD W  SHP AKGLLNK FPHYD+L YVF +DHAT GRAE+F D
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSW--SHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDD

Query:  VGSNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHA
        VGSN P G+  F     +D +   MYS+GL+MSPD++M  R+ R+SE R  SSGSK+KRGG  +++ +I+R+A+EY N+QL  IAEW   QRQDA+ T  
Subjt:  VGSNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHA

Query:  EVVRQLQ
        EVVRQL+
Subjt:  EVVRQLQ

A0A5A7UME4 Retrotransposon protein4.6e-6460Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG
        M+  ++PG NI A+ ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK++FD WSHP AKGLLNK F HYD+L YVFG+D AT GRAE+F D+G
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG

Query:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV
        SN P G+         D + P MYS GL+MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T  E+
Subjt:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV

Query:  VRQLQ
        VR L+
Subjt:  VRQLQ

A0A5A7VF53 Retrotransposon protein3.5e-6460Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG
        M+  ++PG NI A+ ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK++FD WSHP AKGLLNK F HYD+L YVFG+D AT GRAE+F D+G
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG

Query:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV
        SN P G+  F      D + P MYS GL+MSPDD+M  R+ R+SE R  SS SKRKR G A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T  ++
Subjt:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV

Query:  VRQLQ
        VRQL+
Subjt:  VRQLQ

A0A5D3DPR5 Retrotransposon protein2.7e-6460Show/hide
Query:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG
        M+  ++PG NI A+ ID RIK MKR F A++EMRGP CSGFGWNDE KCI+AEK++FD WSHP AKGLLNK F HYD+L YVFG+D AT GRAE+F D+G
Subjt:  MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVG

Query:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV
        SN P G+         D + P MYS GL+MSPDD+M  R+ R+SE R  SSGSKRKR G A ++ +I+R+A+EY N+QL  IAEWP  QRQDA+ T  E+
Subjt:  SNVPLGFKIFLHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEV

Query:  VRQLQ
        VR L+
Subjt:  VRQLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTCGAGAGGATGCCGGGACATAACATAACGGCTACGATAATAGATTGTCGAATTAAGACAATGAAAAGAGCATTCCAAGCGATATCTGAAATGAGGGGTCCAAC
GTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGAGTCATCCAACCGCAAAGGGCCTCCTAAACAAACCCTTTC
CCCACTATGACGACCTTTGCTACGTGTTTGGAAGAGATCATGCAACAGAAGGTCGAGCTGAAACCTTCGACGATGTTGGGTCGAACGTGCCTCTAGGCTTCAAAATATTT
CTCCACTACGACGGGAACGATATGGAGATCCCGACGATGTACAGTCAGGGCCTGGACATGTCACCTGACGACATAATGACTCCACGATCGGTTCGTATGTCTGAGGCTAG
GGCTGGTTCGAGCGGGTCGAAGAGGAAACGGGGAGGGCAGGCATTAGAGGCGGCAGAAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTTAAGGTCATTGCAG
AATGGCCCAAAGAACAACGACAAGATGCAAGCGTGACACATGCGGAAGTCGTTAGACAACTACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTCGAGAGGATGCCGGGACATAACATAACGGCTACGATAATAGATTGTCGAATTAAGACAATGAAAAGAGCATTCCAAGCGATATCTGAAATGAGGGGTCCAAC
GTGTAGTGGGTTCGGTTGGAATGATGAGCTGAAATGCATCATTGCCGAGAAAGACTTGTTCGACAGTTGGAGTCATCCAACCGCAAAGGGCCTCCTAAACAAACCCTTTC
CCCACTATGACGACCTTTGCTACGTGTTTGGAAGAGATCATGCAACAGAAGGTCGAGCTGAAACCTTCGACGATGTTGGGTCGAACGTGCCTCTAGGCTTCAAAATATTT
CTCCACTACGACGGGAACGATATGGAGATCCCGACGATGTACAGTCAGGGCCTGGACATGTCACCTGACGACATAATGACTCCACGATCGGTTCGTATGTCTGAGGCTAG
GGCTGGTTCGAGCGGGTCGAAGAGGAAACGGGGAGGGCAGGCATTAGAGGCGGCAGAAATTATTCGCAGTGCCATGGAATATGCTAATGACCAACTTAAGGTCATTGCAG
AATGGCCCAAAGAACAACGACAAGATGCAAGCGTGACACATGCGGAAGTCGTTAGACAACTACAGTAA
Protein sequenceShow/hide protein sequence
MIVERMPGHNITATIIDCRIKTMKRAFQAISEMRGPTCSGFGWNDELKCIIAEKDLFDSWSHPTAKGLLNKPFPHYDDLCYVFGRDHATEGRAETFDDVGSNVPLGFKIF
LHYDGNDMEIPTMYSQGLDMSPDDIMTPRSVRMSEARAGSSGSKRKRGGQALEAAEIIRSAMEYANDQLKVIAEWPKEQRQDASVTHAEVVRQLQ