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PI0003690 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003690
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr06:16010382..16010756
RNA-Seq ExpressionPI0003690
SyntenyPI0003690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038406.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.7e-3976.86Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQGS+L KKS EQL+ESSKGGIII+ENPLF+N TPAS+L +KESHLEVVSVM+AD+  EATM  IERKINFLMK +EERDHEIA LKD MKA ETA
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDN
        E  +T AIK  DKGKVVLQ+N
Subjt:  ELIQTYAIKANDKGKVVLQDN

KAA0066644.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.8e-4177.42Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQGS+L KKS EQL+ES KGGIIIK+NPLF+N T AS+LS+KESHLEVVSVM+ADV  EATMA +ERKIN+LMK IEERDHEIA LKD +KA ETA
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDNQTQ
        E  +T A+KANDKGKVVLQ+NQTQ
Subjt:  ELIQTYAIKANDKGKVVLQDNQTQ

TYJ96985.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-4076.61Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQGS+L KKS EQL+ESSKGGIII+ENPLF+N TPAS+L +KESHL+VVSVM+ D+  EATM  IERKINFLMK +EERDHEIA LKD MKA ETA
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDNQTQ
        E  +T AIKA DKGKVVLQ+NQTQ
Subjt:  ELIQTYAIKANDKGKVVLQDNQTQ

TYK04088.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]6.8e-4177.42Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQGS+L KKS EQL+ES KGGIIIK+NPLF+N T AS+LS+KESHLEVVSVM+ADV  EATMA +ERKIN+LMK IEERDHEIA LKD +KA ETA
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDNQTQ
        E  +T A+KANDKGKVVLQ+NQTQ
Subjt:  ELIQTYAIKANDKGKVVLQDNQTQ

TYK16493.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.9e-3974.19Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQG +L KKS EQL+ES KGGIII++NPLFDN TPAS+LS+KESHLEVVSVM+ DV  EATMA +ERKINFLMK +EERDHEIA LKD MKA ET 
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDNQTQ
        EL QT  +KA DKGK V+Q+NQ Q
Subjt:  ELIQTYAIKANDKGKVVLQDNQTQ

TrEMBL top hitse value%identityAlignment
A0A5A7T864 Ty3-gypsy retrotransposon protein8.1e-4076.86Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQGS+L KKS EQL+ESSKGGIII+ENPLF+N TPAS+L +KESHLEVVSVM+AD+  EATM  IERKINFLMK +EERDHEIA LKD MKA ETA
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDN
        E  +T AIK  DKGKVVLQ+N
Subjt:  ELIQTYAIKANDKGKVVLQDN

A0A5A7VH30 Ty3-gypsy retrotransposon protein3.3e-4177.42Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQGS+L KKS EQL+ES KGGIIIK+NPLF+N T AS+LS+KESHLEVVSVM+ADV  EATMA +ERKIN+LMK IEERDHEIA LKD +KA ETA
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDNQTQ
        E  +T A+KANDKGKVVLQ+NQTQ
Subjt:  ELIQTYAIKANDKGKVVLQDNQTQ

A0A5D3BEV5 Ty3-gypsy retrotransposon protein5.6e-4176.61Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQGS+L KKS EQL+ESSKGGIII+ENPLF+N TPAS+L +KESHL+VVSVM+ D+  EATM  IERKINFLMK +EERDHEIA LKD MKA ETA
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDNQTQ
        E  +T AIKA DKGKVVLQ+NQTQ
Subjt:  ELIQTYAIKANDKGKVVLQDNQTQ

A0A5D3BYI9 Ty3-gypsy retrotransposon protein3.3e-4177.42Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQGS+L KKS EQL+ES KGGIIIK+NPLF+N T AS+LS+KESHLEVVSVM+ADV  EATMA +ERKIN+LMK IEERDHEIA LKD +KA ETA
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDNQTQ
        E  +T A+KANDKGKVVLQ+NQTQ
Subjt:  ELIQTYAIKANDKGKVVLQDNQTQ

A0A5D3CX82 Ty3-gypsy retrotransposon protein1.4e-3974.19Show/hide
Query:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA
        MQEQEQG +L KKS EQL+ES KGGIII++NPLFDN TPAS+LS+KESHLEVVSVM+ DV  EATMA +ERKINFLMK +EERDHEIA LKD MKA ET 
Subjt:  MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETA

Query:  ELIQTYAIKANDKGKVVLQDNQTQ
        EL QT  +KA DKGK V+Q+NQ Q
Subjt:  ELIQTYAIKANDKGKVVLQDNQTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAACAAGAACAAGGTTCTATCCTCATGAAGAAAAGTTGGGAACAACTAATGGAATCTTCTAAAGGCGGGATCATCATCAAAGAGAATCCTTTGTTCGACAACTG
TACTCCTGCTTCTGATCTATCAGAGAAAGAATCACACCTTGAAGTAGTGTCTGTCATGATCGCAGATGTAATAGATGAGGCAACCATGGCACGGATAGAGAGGAAAATAA
ATTTCCTAATGAAAGCTATCGAGGAGCGAGATCATGAAATCGCTGACTTGAAAGATCATATGAAGGCTCGTGAAACTGCTGAGTTGATCCAAACTTATGCTATCAAAGCT
AACGATAAAGGAAAAGTTGTGTTGCAGGATAACCAGACGCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAACAAGAACAAGGTTCTATCCTCATGAAGAAAAGTTGGGAACAACTAATGGAATCTTCTAAAGGCGGGATCATCATCAAAGAGAATCCTTTGTTCGACAACTG
TACTCCTGCTTCTGATCTATCAGAGAAAGAATCACACCTTGAAGTAGTGTCTGTCATGATCGCAGATGTAATAGATGAGGCAACCATGGCACGGATAGAGAGGAAAATAA
ATTTCCTAATGAAAGCTATCGAGGAGCGAGATCATGAAATCGCTGACTTGAAAGATCATATGAAGGCTCGTGAAACTGCTGAGTTGATCCAAACTTATGCTATCAAAGCT
AACGATAAAGGAAAAGTTGTGTTGCAGGATAACCAGACGCAATAG
Protein sequenceShow/hide protein sequence
MQEQEQGSILMKKSWEQLMESSKGGIIIKENPLFDNCTPASDLSEKESHLEVVSVMIADVIDEATMARIERKINFLMKAIEERDHEIADLKDHMKARETAELIQTYAIKA
NDKGKVVLQDNQTQ