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PI0003741 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003741
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr04:20586233..20586814
RNA-Seq ExpressionPI0003741
SyntenyPI0003741
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]7.7e-1543.33Show/hide
Query:  DDFIQDLCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQTEDQQNDEASENED-DDFYKFINDAIGKPMLDG
        D     +C+P   +E+E ++LE+ +LVP+G   ++VLE+ +DD L KGK I  + A ET      K+T  +Q+D A E++D D+++KFI +  GKPM DG
Subjt:  DDFIQDLCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQTEDQQNDEASENED-DDFYKFINDAIGKPMLDG

Query:  FEDIFQTQADLQERTMRHKK
        FED+FQ QA+ QE  +R +K
Subjt:  FEDIFQTQADLQERTMRHKK

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]1.1e-1338.78Show/hide
Query:  MDDFIQD-LCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQT-----EDQQNDEASENEDDD---FYKFIND
        + D +QD LC+    + +  ++ ENTTL  + L  +++LE+ IDD L K K++  E+A +TR     KQ+     +D +  EA  ++DDD   ++KFIN+
Subjt:  MDDFIQD-LCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQT-----EDQQNDEASENEDDD---FYKFIND

Query:  AIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDNH---HQA
         + +P+  GFED+FQ QA+LQE  ++++K + DLELK D+    HQA
Subjt:  AIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDNH---HQA

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]3.8e-1458.02Show/hide
Query:  GETRALLELKQTEDQQNDEASENEDDD-FYKFINDAIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDN---HHQ
        GET A L LKQ  +QQ + A E++++D ++KFI D  GKP++DGF+D+FQ Q DLQE T RH+KQI DLELK+DN   HHQ
Subjt:  GETRALLELKQTEDQQNDEASENEDDD-FYKFINDAIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDN---HHQ

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]5.9e-1543.7Show/hide
Query:  DFIQDL-CNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQTEDQQNDEASENEDDDFYKFINDAIGKPMLDGF
        D I DL C+P   +E+E ++LE+ +LVP+G   ++VLE+ +DD L KGK I  + A ET      K+T  Q +     +E D+++KFI +  GKPM DGF
Subjt:  DFIQDL-CNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQTEDQQNDEASENEDDDFYKFINDAIGKPMLDGF

Query:  EDIFQTQADLQERTMRHKK
        ED+FQ QA+ QE  +R +K
Subjt:  EDIFQTQADLQERTMRHKK

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]1.1e-1338.78Show/hide
Query:  MDDFIQD-LCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQT-----EDQQNDEASENEDDD---FYKFIND
        + D +QD LC+    + +  ++ ENTTL  + L  +++LE+ IDD L K K++  E+A +TR     KQ+     +D +  EA  ++DDD   ++KFIN+
Subjt:  MDDFIQD-LCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQT-----EDQQNDEASENEDDD---FYKFIND

Query:  AIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDNH---HQA
         + +P+  GFED+FQ QA+LQE  ++++K + DLELK D+    HQA
Subjt:  AIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDNH---HQA

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein3.7e-1543.33Show/hide
Query:  DDFIQDLCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQTEDQQNDEASENED-DDFYKFINDAIGKPMLDG
        D     +C+P   +E+E ++LE+ +LVP+G   ++VLE+ +DD L KGK I  + A ET      K+T  +Q+D A E++D D+++KFI +  GKPM DG
Subjt:  DDFIQDLCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQTEDQQNDEASENED-DDFYKFINDAIGKPMLDG

Query:  FEDIFQTQADLQERTMRHKK
        FED+FQ QA+ QE  +R +K
Subjt:  FEDIFQTQADLQERTMRHKK

A0A5A7TJU0 Uncharacterized protein5.3e-1438.78Show/hide
Query:  MDDFIQD-LCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQT-----EDQQNDEASENEDDD---FYKFIND
        + D +QD LC+    + +  ++ ENTTL  + L  +++LE+ IDD L K K++  E+A +TR     KQ+     +D +  EA  ++DDD   ++KFIN+
Subjt:  MDDFIQD-LCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQT-----EDQQNDEASENEDDD---FYKFIND

Query:  AIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDNH---HQA
         + +P+  GFED+FQ QA+LQE  ++++K + DLELK D+    HQA
Subjt:  AIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDNH---HQA

A0A5A7U0L9 Uncharacterized protein1.8e-1458.02Show/hide
Query:  GETRALLELKQTEDQQNDEASENEDDD-FYKFINDAIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDN---HHQ
        GET A L LKQ  +QQ + A E++++D ++KFI D  GKP++DGF+D+FQ Q DLQE T RH+KQI DLELK+DN   HHQ
Subjt:  GETRALLELKQTEDQQNDEASENEDDD-FYKFINDAIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDN---HHQ

A0A5D3D8Q5 Uncharacterized protein2.8e-1543.7Show/hide
Query:  DFIQDL-CNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQTEDQQNDEASENEDDDFYKFINDAIGKPMLDGF
        D I DL C+P   +E+E ++LE+ +LVP+G   ++VLE+ +DD L KGK I  + A ET      K+T  Q +     +E D+++KFI +  GKPM DGF
Subjt:  DFIQDL-CNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQTEDQQNDEASENEDDDFYKFINDAIGKPMLDGF

Query:  EDIFQTQADLQERTMRHKK
        ED+FQ QA+ QE  +R +K
Subjt:  EDIFQTQADLQERTMRHKK

A0A5D3E1H0 Uncharacterized protein5.3e-1438.78Show/hide
Query:  MDDFIQD-LCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQT-----EDQQNDEASENEDDD---FYKFIND
        + D +QD LC+    + +  ++ ENTTL  + L  +++LE+ IDD L K K++  E+A +TR     KQ+     +D +  EA  ++DDD   ++KFIN+
Subjt:  MDDFIQD-LCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQT-----EDQQNDEASENEDDD---FYKFIND

Query:  AIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDNH---HQA
         + +P+  GFED+FQ QA+LQE  ++++K + DLELK D+    HQA
Subjt:  AIGKPMLDGFEDIFQTQADLQERTMRHKKQILDLELKVDNH---HQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACTTTATCCAAGACCTCTGCAATCCAAAATTTGAAGTTGAAGAAGAGCCAAGGGATCTAGAGAACACGACCCTAGTTCCTATTGGACTGCGAGAAGAAGATGT
CTTGGAGGAGCCAATTGATGACCTACTCTCTAAAGGAAAGAAAATCGCCTTTGAGGAAGCTGGTGAGACGCGAGCTCTCTTGGAACTTAAGCAAACAGAAGATCAGCAAA
ATGACGAGGCGAGCGAGAATGAAGATGATGATTTTTACAAGTTCATCAATGATGCAATTGGAAAACCAATGTTGGATGGATTTGAAGACATCTTCCAAACTCAAGCAGAT
TTGCAAGAACGCACGATGAGACATAAGAAACAGATTCTGGACTTGGAGTTGAAAGTTGATAATCATCATCAAGCACAACATGATGAACTAGCCTTTGAGATTTCAAGTTT
AGAAGCGCAAAACAGAGCGATGGTGAGTTTGATAAAGAAAGCCTCGCAAGGGTCTGACAAACAATACAAATCAATGATGAATTACATCCACTCAGCGATTACAAGTTTCA
TGCCAAAAGCCTGTCATTCTGCCAGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGACTTTATCCAAGACCTCTGCAATCCAAAATTTGAAGTTGAAGAAGAGCCAAGGGATCTAGAGAACACGACCCTAGTTCCTATTGGACTGCGAGAAGAAGATGT
CTTGGAGGAGCCAATTGATGACCTACTCTCTAAAGGAAAGAAAATCGCCTTTGAGGAAGCTGGTGAGACGCGAGCTCTCTTGGAACTTAAGCAAACAGAAGATCAGCAAA
ATGACGAGGCGAGCGAGAATGAAGATGATGATTTTTACAAGTTCATCAATGATGCAATTGGAAAACCAATGTTGGATGGATTTGAAGACATCTTCCAAACTCAAGCAGAT
TTGCAAGAACGCACGATGAGACATAAGAAACAGATTCTGGACTTGGAGTTGAAAGTTGATAATCATCATCAAGCACAACATGATGAACTAGCCTTTGAGATTTCAAGTTT
AGAAGCGCAAAACAGAGCGATGGTGAGTTTGATAAAGAAAGCCTCGCAAGGGTCTGACAAACAATACAAATCAATGATGAATTACATCCACTCAGCGATTACAAGTTTCA
TGCCAAAAGCCTGTCATTCTGCCAGAATTTGA
Protein sequenceShow/hide protein sequence
MDDFIQDLCNPKFEVEEEPRDLENTTLVPIGLREEDVLEEPIDDLLSKGKKIAFEEAGETRALLELKQTEDQQNDEASENEDDDFYKFINDAIGKPMLDGFEDIFQTQAD
LQERTMRHKKQILDLELKVDNHHQAQHDELAFEISSLEAQNRAMVSLIKKASQGSDKQYKSMMNYIHSAITSFMPKACHSARI