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PI0003760 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003760
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr05:12980205..12981249
RNA-Seq ExpressionPI0003760
SyntenyPI0003760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057976.1 uncharacterized protein E6C27_scaffold274G002800 [Cucumis melo var. makuwa]3.8e-0567.44Show/hide
Query:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQKGSSSKKH
        LK+DI EQ+DLQPI+TLPA I MA KA++KL+KRQK S +KK+
Subjt:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQKGSSSKKH

KAA0064244.1 uncharacterized protein E6C27_scaffold548G001980 [Cucumis melo var. makuwa]1.4e-0467.44Show/hide
Query:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQK-GSSSKK
        LK+DI EQ+DLQP++TLPA I M +KAE+KL+KRQK GS+S+K
Subjt:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQK-GSSSKK

TYK13853.1 uncharacterized protein E5676_scaffold832G00370 [Cucumis melo var. makuwa]3.8e-0567.44Show/hide
Query:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQKGSSSKKH
        LK+DI EQ+DLQPI+TL A ISMA+KAE+KL+KRQK + +KK+
Subjt:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQKGSSSKKH

TrEMBL top hitse value%identityAlignment
A0A5A7UUZ0 Retrotrans_gag domain-containing protein1.8e-0567.44Show/hide
Query:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQKGSSSKKH
        LK+DI EQ+DLQPI+TLPA I MA KA++KL+KRQK S +KK+
Subjt:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQKGSSSKKH

A0A5D3CPR5 Uncharacterized protein1.8e-0567.44Show/hide
Query:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQKGSSSKKH
        LK+DI EQ+DLQPI+TL A ISMA+KAE+KL+KRQK + +KK+
Subjt:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQKGSSSKKH

A0A5D3D505 Uncharacterized protein7.0e-0567.44Show/hide
Query:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQK-GSSSKK
        LK+DI EQ+DLQP++TLPA I M +KAE+KL+KRQK GS+S+K
Subjt:  LKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQK-GSSSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGAAAAAACACCACCAACTCAAACAAAGGGAATAACGTAAAGATTCAACCCGAAGACCCGAAAATCCTCTCACCTCGAACTTCAACTGTCCGATTGTTGGTCGT
CGAAGAAACTGTGGAGGATATCAACACTCGAGTAGTGAATCTACAACTCACCGTAGAACGCAGATTGAAGGATGACATTCAAGAGCAAATGGATCTTCAACCTATTAGCA
CACTTCCAGCAACCATCTCAATGGCTTACAAAGCTGAAATCAAGTTGGATAAGAGACAAAAAGGAAGTAGCTCCAAGAAGCATACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGAAAAAACACCACCAACTCAAACAAAGGGAATAACGTAAAGATTCAACCCGAAGACCCGAAAATCCTCTCACCTCGAACTTCAACTGTCCGATTGTTGGTCGT
CGAAGAAACTGTGGAGGATATCAACACTCGAGTAGTGAATCTACAACTCACCGTAGAACGCAGATTGAAGGATGACATTCAAGAGCAAATGGATCTTCAACCTATTAGCA
CACTTCCAGCAACCATCTCAATGGCTTACAAAGCTGAAATCAAGTTGGATAAGAGACAAAAAGGAAGTAGCTCCAAGAAGCATACATGA
Protein sequenceShow/hide protein sequence
MAGKNTTNSNKGNNVKIQPEDPKILSPRTSTVRLLVVEETVEDINTRVVNLQLTVERRLKDDIQEQMDLQPISTLPATISMAYKAEIKLDKRQKGSSSKKHT