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PI0003781 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003781
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr06:21608619..21609067
RNA-Seq ExpressionPI0003781
SyntenyPI0003781
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033561.1 uncharacterized protein E6C27_scaffold261G001160 [Cucumis melo var. makuwa]1.3e-3778.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MS + SIPK IVHKARTNLGVNISY+KAWRAKEH+VK L GD VESY+LI  FFDKLV+SNP      +M+DSGHFKFCFM FGASIEGWKYCRPIISVD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        GTF
Subjt:  GTF
KAA0037812.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]4.3e-3878.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MSTNRSIP  IVHKARTNLG+NISYQKAWRAKEH+VK L GD VESY+LI  FFDKLVESNP      +M+DSGHFKFCFM FGASIEGWKYC+PII VD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        G F
Subjt:  GTF
KAA0062291.1 hypothetical protein E6C27_scaffold154G00320 [Cucumis melo var. makuwa]1.3e-3778.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MS+ RSIPK IVHKARTNL VNISYQKAWRAKEH++K L GD VESY+LI  FFDKLVESNP      +++DSGHFKFCFM FGASIEGWKYCRPIISVD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        GTF
Subjt:  GTF
TYJ95626.1 uncharacterized protein E5676_scaffold104G00450 [Cucumis melo var. makuwa]1.3e-3778.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MS + SIPK IVHKARTNLGVNISY+KAWRAKEH+VK L GD VESY+LI  FFDKLV+SNP      +M+DSGHFKFCFM FGASIEGWKYCRPIISVD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        GTF
Subjt:  GTF
TYK02872.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]4.3e-3878.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MSTNRSIP  IVHKARTNLG+NISYQKAWRAKEH+VK L GD VESY+LI  FFDKLVESNP      +M+DSGHFKFCFM FGASIEGWKYC+PII VD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        G F
Subjt:  GTF
TrEMBL top hitse value%identityAlignment
A0A5A7SVW4 Uncharacterized protein6.1e-3878.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MS + SIPK IVHKARTNLGVNISY+KAWRAKEH+VK L GD VESY+LI  FFDKLV+SNP      +M+DSGHFKFCFM FGASIEGWKYCRPIISVD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        GTF
Subjt:  GTF
A0A5A7T2W2 Protein FAR1-RELATED SEQUENCE 42.1e-3878.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MSTNRSIP  IVHKARTNLG+NISYQKAWRAKEH+VK L GD VESY+LI  FFDKLVESNP      +M+DSGHFKFCFM FGASIEGWKYC+PII VD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        G F
Subjt:  GTF
A0A5A7V9D5 SWIM-type domain-containing protein6.1e-3878.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MS+ RSIPK IVHKARTNL VNISYQKAWRAKEH++K L GD VESY+LI  FFDKLVESNP      +++DSGHFKFCFM FGASIEGWKYCRPIISVD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        GTF
Subjt:  GTF
A0A5D3B9S0 Uncharacterized protein6.1e-3878.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MS + SIPK IVHKARTNLGVNISY+KAWRAKEH+VK L GD VESY+LI  FFDKLV+SNP      +M+DSGHFKFCFM FGASIEGWKYCRPIISVD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        GTF
Subjt:  GTF
A0A5D3BVN2 Protein FAR1-RELATED SEQUENCE 42.1e-3878.64Show/hide
Query:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD
        MSTNRSIP  IVHKARTNLG+NISYQKAWRAKEH+VK L GD VESY+LI  FFDKLVESNP      +M+DSGHFKFCFM FGASIEGWKYC+PII VD
Subjt:  MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNP------QMNDSGHFKFCFMFFGASIEGWKYCRPIISVD

Query:  GTF
        G F
Subjt:  GTF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTAATCGTTCCATTCCAAAAGTGATTGTCCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTATCAAAAAGCTTGGAGGGCAAAAGAACACATAGTAAA
GGAATTAAAAGGTGATGCAGTTGAATCGTACTCGTTGATTGCAAGCTTCTTTGACAAATTGGTTGAATCTAACCCACAGATGAATGATAGTGGTCATTTCAAGTTTTGTT
TTATGTTTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGGCCTATCATTTCTGTTGATGGCACGTTTGAAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTAATCGTTCCATTCCAAAAGTGATTGTCCATAAGGCTCGTACAAATCTTGGAGTTAATATAAGTTATCAAAAAGCTTGGAGGGCAAAAGAACACATAGTAAA
GGAATTAAAAGGTGATGCAGTTGAATCGTACTCGTTGATTGCAAGCTTCTTTGACAAATTGGTTGAATCTAACCCACAGATGAATGATAGTGGTCATTTCAAGTTTTGTT
TTATGTTTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGGCCTATCATTTCTGTTGATGGCACGTTTGAAGTGTAA
Protein sequenceShow/hide protein sequence
MSTNRSIPKVIVHKARTNLGVNISYQKAWRAKEHIVKELKGDAVESYSLIASFFDKLVESNPQMNDSGHFKFCFMFFGASIEGWKYCRPIISVDGTFEV