CuGenDBv2

Gene ID	PI0003790
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Beta-galactosidase
Genome location	chr04:17650746..17651282
RNA-Seq Expression	PI0003790
Synteny	PI0003790
Gene Ontology terms	GO:0000723 - telomere maintenance (biological process) GO:0006116 - NADH oxidation (biological process) GO:0006303 - double-strand break repair via nonhomologous end joining (biological process) GO:0006310 - DNA recombination (biological process) GO:0015074 - DNA integration (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0043564 - Ku70:Ku80 complex (cellular component) GO:0003678 - DNA helicase activity (molecular function) GO:0003684 - damaged DNA binding (molecular function) GO:0003954 - NADH dehydrogenase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0042162 - telomeric DNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034386.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.1e-68

76.54

Show/hide

Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

TYJ97256.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.1e-68

76.54

Show/hide

Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.1e-68

76.54

Show/hide

Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.1e-68

76.54

Show/hide

Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

TYK16957.1 ATP-dependent DNA helicase 2 subunit KU70 [Cucumis melo var. makuwa]

1.1e-68

76.54

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Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM64 Beta-galactosidase

5.4e-69

76.54

Show/hide

Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

A0A5A7UGB2 Beta-galactosidase

5.4e-69

76.54

Show/hide

Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

A0A5A7V0Y9 Beta-galactosidase

5.4e-69

76.54

Show/hide

Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

A0A5D3BJK7 Beta-galactosidase

5.4e-69

76.54

Show/hide

Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

A0A5D3C4T4 Beta-galactosidase

5.4e-69

76.54

Show/hide

Query:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN
        M LEGR++FGFLTGEI RP PGD  E  WKGEDSL+RS LINSMEP I KPLLY  +AKD+WDTT+TLYS RQNASRLYTLRKQVH CKQGT+DVTTYFN
Subjt:  MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFN

Query:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL
        KLSL+WQE+DLCRE VW +  DS QY+++EE DR+YDFLAGLN KFD VCGRILGQRP+P L
Subjt:  KLSLIWQEIDLCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

1.3e-14

27.78

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Query:  KFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFNKLSLIWQ
        KFGF+ G +P+P P  P    W+  ++++   L+NSM   + + ++Y  +A  +W+  R ++    +  ++Y LR+++   +QG   V  YF KLS +W 
Subjt:  KFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFNKLSLIWQ

Query:  EIDLCRELV-----WSSSRDSIQYSRVEEIDRIYDFLAG--LNSKFDIVCGRILGQRPIPPL
        E+     +        +   + +     E ++ Y+FL G  LN  F+ V  +I+ Q+P P L
Subjt:  EIDLCRELV-----WSSSRDSIQYSRVEEIDRIYDFLAG--LNSKFDIVCGRILGQRPIPPL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTCCTCGAAGGGCGGCATAAGTTTGGTTTTCTGACAGGGGAAATACCTCGTCCTTCACCTGGAGACCCACAGGAATGTTACTGGAAGGGGGAGGATTCTCTTCTTCG
ATCCACACTGATCAATAGCATGGAGCCAAATATCGAAAAACCTTTATTATACACTGCAAGTGCTAAGGATATTTGGGACACAACCCGGACATTATATTCCAACCGTCAAA
ATGCCTCTCGCCTATACACATTACGGAAACAGGTTCATGAGTGCAAGCAAGGGACCATGGATGTTACAACCTATTTTAACAAGCTCTCTCTTATCTGGCAGGAGATAGAT
CTTTGCAGAGAACTTGTCTGGAGCAGTTCTCGTGATAGTATCCAGTACTCAAGGGTCGAAGAGATTGACAGGATTTATGACTTTCTGGCTGGCCTTAATTCTAAGTTTGA
TATAGTCTGTGGGCGTATACTAGGTCAAAGACCGATTCCTCCCTTATGGAGGTTTGTTCTGAAGTTCGACTTGAGGAGGATCGTACAAGTGCTATGA

mRNA sequence

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Protein sequence

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MVLEGRHKFGFLTGEIPRPSPGDPQECYWKGEDSLLRSTLINSMEPNIEKPLLYTASAKDIWDTTRTLYSNRQNASRLYTLRKQVHECKQGTMDVTTYFNKLSLIWQEID
LCRELVWSSSRDSIQYSRVEEIDRIYDFLAGLNSKFDIVCGRILGQRPIPPLWRFVLKFDLRRIVQVL

PI0003790 (gene) of Melon (PI 482460) v1 genome