CuGenDBv2

Gene ID	PI0003791
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Rif1_N domain-containing protein
Genome location	chr02:19763389..19764866
RNA-Seq Expression	PI0003791
Synteny	PI0003791
Gene Ontology terms	GO:0007049 - cell cycle (biological process) GO:0051052 - regulation of DNA metabolic process (biological process) GO:0000781 - chromosome, telomeric region (cellular component) GO:0005634 - nucleus (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR022031 - Telomere-associated protein Rif1, N-terminal IPR028566 - Telomere-associated protein Rif1

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0050127.1 Rif1_N domain-containing protein [Cucumis melo var. makuwa]

9.6e-69

92.76

Show/hide

Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        MADISNRL++INTLICSGVKANKSLAYSSLL IQQASNTNHTSIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILA++FQSLLLAVT AL+NP G
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG

TYK06384.1 putative Telomere-associated protein RIF1 [Cucumis melo var. makuwa]

1.1e-69

93.42

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Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        MADISNRL++INTLICSGVKANKSLAYSSLL IQQASNTNHTSIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILA++FQSLLLAVTHAL+NP G
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG

XP_008443952.1 PREDICTED: uncharacterized protein LOC103487420 isoform X1 [Cucumis melo]

9.6e-69

92.76

Show/hide

Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        MADISNRL++INTLICSGVKANKSLAYSSLL IQQASNTNHTSIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILA++FQSLLLAVT AL+NP G
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG

XP_008443955.1 PREDICTED: uncharacterized protein LOC103487420 isoform X4 [Cucumis melo]

9.6e-69

92.76

Show/hide

Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        MADISNRL++INTLICSGVKANKSLAYSSLL IQQASNTNHTSIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILA++FQSLLLAVT AL+NP G
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG

XP_008443956.1 PREDICTED: uncharacterized protein LOC103487420 isoform X5 [Cucumis melo]

9.6e-69

92.76

Show/hide

Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        MADISNRL++INTLICSGVKANKSLAYSSLL IQQASNTNHTSIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILA++FQSLLLAVT AL+NP G
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVY1 Rif1_N domain-containing protein

2.3e-76

79.7

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Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        M +ISNRL+EINTLICSG+KA+KSLAYSSLL IQQAS  +H SIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG---------------------FHAFYYPTAIWDSVGYKLFCQVSS
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILAVHFQSLLLAVTHALDNP G                     FH FYYPT IWDS+GY+LF QVSS
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG---------------------FHAFYYPTAIWDSVGYKLFCQVSS

A0A1S3B8S8 uncharacterized protein LOC103487420 isoform X4

4.6e-69

92.76

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Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        MADISNRL++INTLICSGVKANKSLAYSSLL IQQASNTNHTSIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILA++FQSLLLAVT AL+NP G
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG

A0A1S3B981 uncharacterized protein LOC103487420 isoform X5

4.6e-69

92.76

Show/hide

Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        MADISNRL++INTLICSGVKANKSLAYSSLL IQQASNTNHTSIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILA++FQSLLLAVT AL+NP G
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG

A0A5A7U6Y2 Rif1_N domain-containing protein

4.6e-69

92.76

Show/hide

Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        MADISNRL++INTLICSGVKANKSLAYSSLL IQQASNTNHTSIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILA++FQSLLLAVT AL+NP G
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG

A0A5D3C4Y6 Putative Telomere-associated protein RIF1

5.5e-70

93.42

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Query:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK
        MADISNRL++INTLICSGVKANKSLAYSSLL IQQASNTNHTSIDALAEFSRDSIH IVSDTQDEDEEIAAQALKCLGFIIYH SIVAAIPAKEANFIFK
Subjt:  MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFK

Query:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG
        SLAELISRTRLKSVCNLGVWCISIQQLD+DILA++FQSLLLAVTHAL+NP G
Subjt:  SLAELISRTRLKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCGGACATCTCAAATCGTCTCGAAGAAATCAATACCCTAATTTGTTCTGGAGTCAAAGCAAACAAATCACTTGCCTACTCCTCTCTTCTACACATCCAGCAGGCCTC
TAATACAAACCACACTTCAATTGATGCCCTAGCGGAGTTTTCTCGGGATTCGATACACCGTATCGTCTCCGATACACAAGATGAAGACGAAGAAATCGCCGCACAGGCAT
TGAAGTGCTTAGGATTCATAATTTATCACCCATCGATTGTTGCTGCCATTCCGGCTAAAGAAGCCAACTTCATCTTTAAGTCATTGGCAGAACTAATCAGTAGAACGAGA
CTGAAGTCAGTATGTAACTTAGGAGTCTGGTGCATATCTATTCAACAGCTTGATGCAGACATTCTAGCTGTGCACTTCCAATCTTTATTGCTGGCAGTTACTCATGCCCT
CGACAATCCCAATGGTTTTCATGCCTTTTACTACCCTACCGCGATATGGGATAGCGTTGGTTACAAGCTGTTTTGTCAAGTGTCAAGTGTCAAGTCCAGAATTGAAACTT
TCCTCTCCCATTCTCTGTGTGTACTGCAAGTTCGTCTCTACAGTCCTGACATGTGA

mRNA sequence

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Protein sequence

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MADISNRLEEINTLICSGVKANKSLAYSSLLHIQQASNTNHTSIDALAEFSRDSIHRIVSDTQDEDEEIAAQALKCLGFIIYHPSIVAAIPAKEANFIFKSLAELISRTR
LKSVCNLGVWCISIQQLDADILAVHFQSLLLAVTHALDNPNGFHAFYYPTAIWDSVGYKLFCQVSSVKSRIETFLSHSLCVLQVRLYSPDM

PI0003791 (gene) of Melon (PI 482460) v1 genome