; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003794 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003794
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAlba domain-containing protein
Genome locationchr05:2188832..2190780
RNA-Seq ExpressionPI0003794
SyntenyPI0003794
Gene Ontology termsGO:0048235 - pollen sperm cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139384.1 uncharacterized protein At2g34160 [Cucumis sativus]8.2e-6197.87Show/hide
Query:  ATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGAT ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ
        LGKSEKFDSLMTAATAVPETVVAV AAAEEEKKAEESKEEQ
Subjt:  LGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ

XP_008456222.1 PREDICTED: uncharacterized protein At2g34160 [Cucumis melo]1.4e-6096.48Show/hide
Query:  MATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGAT ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ
        VLGKSEKFDSLMTAATAVPETVVAV AA EEEKKAEE+KEEQ
Subjt:  VLGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ

XP_022946134.1 uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata]2.2e-5383.54Show/hide
Query:  MATIAVSGAT---------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGR
        MAT+AVSGAT         AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGR
Subjt:  MATIAVSGAT---------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVEAA-------AEEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAAT VPE  VA   A       A EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVEAA-------AEEEKKAEESKEEQ

XP_022999100.1 uncharacterized protein At2g34160 isoform X1 [Cucurbita maxima]2.2e-5381.6Show/hide
Query:  MATIAVSGAT---------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGR
        MAT+AVSGAT         AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGR
Subjt:  MATIAVSGAT---------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVEA------------AAEEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAAT VPE  VA  A            AA EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVEA------------AAEEEKKAEESKEEQ

XP_038877259.1 uncharacterized protein At2g34160-like [Benincasa hispida]1.8e-5592.36Show/hide
Query:  MATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGA AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATAVP---ETVVAVEAAAEEEKKAEESKEE
        VLGKSEKFDSLMTAATAVP   ETV    AAAEEEKKAEE+KE+
Subjt:  VLGKSEKFDSLMTAATAVP---ETVVAVEAAAEEEKKAEESKEE

TrEMBL top hitse value%identityAlignment
A0A0A0LG69 Alba domain-containing protein4.0e-6197.87Show/hide
Query:  ATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGAT ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ
        LGKSEKFDSLMTAATAVPETVVAV AAAEEEKKAEESKEEQ
Subjt:  LGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ

A0A1S3C2U1 uncharacterized protein At2g341606.7e-6196.48Show/hide
Query:  MATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGAT ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ
        VLGKSEKFDSLMTAATAVPETVVAV AA EEEKKAEE+KEEQ
Subjt:  VLGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ

A0A5D3D4G4 Alba DNA/RNA-binding protein6.7e-6196.48Show/hide
Query:  MATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGAT ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ
        VLGKSEKFDSLMTAATAVPETVVAV AA EEEKKAEE+KEEQ
Subjt:  VLGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEEQ

A0A6J1G2Y0 uncharacterized protein At2g34160-like isoform X11.0e-5383.54Show/hide
Query:  MATIAVSGAT---------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGR
        MAT+AVSGAT         AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGR
Subjt:  MATIAVSGAT---------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVEAA-------AEEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAAT VPE  VA   A       A EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVEAA-------AEEEKKAEESKEEQ

A0A6J1KEC8 uncharacterized protein At2g34160 isoform X11.0e-5381.6Show/hide
Query:  MATIAVSGAT---------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGR
        MAT+AVSGAT         AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEK+VLTSTVGMKDENKGR
Subjt:  MATIAVSGAT---------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVEA------------AAEEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAAT VPE  VA  A            AA EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVEA------------AAEEEKKAEESKEEQ

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341602.2e-3769.67Show/hide
Query:  TIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVL
        T  V+    AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EK+++TSTV +KD+ +GR VQKAKIEI L
Subjt:  TIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVL

Query:  GKSEKFDSLMTAATAVPETVVA
         KSEKFD LM AA    E   A
Subjt:  GKSEKFDSLMTAATAVPETVVA

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein1.6e-3864.75Show/hide
Query:  TIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVL
        T  V+    A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG A EK+++TSTV +KD+++GR VQKAKIEI L
Subjt:  TIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVL

Query:  GKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEE
         KSEKFD LM              AAA EEK+A E++E+
Subjt:  GKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESKEE

AT2G34160.1 Alba DNA/RNA-binding protein1.6e-3869.67Show/hide
Query:  TIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVL
        T  V+    AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EK+++TSTV +KD+ +GR VQKAKIEI L
Subjt:  TIAVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVL

Query:  GKSEKFDSLMTAATAVPETVVA
         KSEKFD LM AA    E   A
Subjt:  GKSEKFDSLMTAATAVPETVVA

AT3G04620.1 Alba DNA/RNA-binding protein8.7e-4575.36Show/hide
Query:  AVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVLGK
        A +  TA  ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EILKNNGLATEK+VLTSTVGMKDE KG++VQKAKIEIVLGK
Subjt:  AVSGATAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVLGK

Query:  SEKFDSLMTAAT--AVPETVVAVEAAAEEEKKAEESKE
        S+KFDSL+   T    PE     EA+AE E   E  +E
Subjt:  SEKFDSLMTAAT--AVPETVVAVEAAAEEEKKAEESKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCACCCAATCAAACCCCACCACGTGTCACTTTCCCGCTCTTTCCCTCTATAAAATCCTTCTTCTTAACGACTTCCACCTAGTTTCCGGAAGCCCTTCAATCGC
CTCCCCTTCCATTTTCCCGCTCCTTCCAATTTTCCCGAGAGAATTTCTCAAGAAAGTAAATTCTTCTCTCTGTTTCTTTCATCTGCTTACGAGAAAACATAGAATTTTAC
TCAGTGAGAAAGTGAAAATAGCAATGGCGACGATTGCAGTATCGGGAGCCACAGCCGCCACTGAAACACAAAAGAAGAACAGAATTCAGGTTTCTAATACCAAGAAACCC
CTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAACATAATGAAGTTGAGCTTTCTGCCTTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCT
TAAGAATAATGGGCTGGCTACGGAAAAGAGAGTTTTGACTTCTACAGTCGGCATGAAAGATGAGAATAAAGGACGTTTGGTTCAGAAAGCTAAGATTGAGATTGTTCTGG
GGAAGTCTGAGAAGTTTGATTCTCTGATGACTGCGGCCACGGCAGTACCGGAGACAGTGGTGGCAGTTGAGGCAGCTGCCGAGGAGGAGAAGAAAGCAGAGGAAAGCAAG
GAGGAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
AACAAAACTTCCAAATTAGGAAAAACATTTTTAAATAATACAAGAATGACAAAAAAGTCCAAGTAAAAATTACTTGATAAAGAAAAAGTTGAGGGTAATTTGGGGAATCT
AAAATAGGGGGGGAGAAAGTTCTATTCTAACGGCCTTTACAAATACTATGACTTTTGACCATCTCTTATTCCCGTGATAACGGTCAACAAAACTAACTTCCATGTTCTCC
ACCCAATCAAACCCCACCACGTGTCACTTTCCCGCTCTTTCCCTCTATAAAATCCTTCTTCTTAACGACTTCCACCTAGTTTCCGGAAGCCCTTCAATCGCCTCCCCTTC
CATTTTCCCGCTCCTTCCAATTTTCCCGAGAGAATTTCTCAAGAAAGTAAATTCTTCTCTCTGTTTCTTTCATCTGCTTACGAGAAAACATAGAATTTTACTCAGTGAGA
AAGTGAAAATAGCAATGGCGACGATTGCAGTATCGGGAGCCACAGCCGCCACTGAAACACAAAAGAAGAACAGAATTCAGGTTTCTAATACCAAGAAACCCCTCTTCTTC
TACGTTAATCTTGCTAAGAGGTACATTCAACAACATAATGAAGTTGAGCTTTCTGCCTTGGGAATGGCAATCACTACTGTTGTCACAATTGCGGAGATTCTTAAGAATAA
TGGGCTGGCTACGGAAAAGAGAGTTTTGACTTCTACAGTCGGCATGAAAGATGAGAATAAAGGACGTTTGGTTCAGAAAGCTAAGATTGAGATTGTTCTGGGGAAGTCTG
AGAAGTTTGATTCTCTGATGACTGCGGCCACGGCAGTACCGGAGACAGTGGTGGCAGTTGAGGCAGCTGCCGAGGAGGAGAAGAAAGCAGAGGAAAGCAAGGAGGAGCAG
TAGGGGAAAAGAAAGAAAGGAATGTGATGTTACATTGTTGTAGTTTAAGAATCACATTTGCAATATTATAGGATAGGCTATTTTCATTTGGAATTCCTCTACTAGTTTTT
TTTTTTGCCTCTTTCTGAACAGTCACAGTTATGAATGAGATGCATGCCATCAACCAAAAAGAACAAAAAAAAAAAAAAAAAAAAAAAAAGGAAGAGGAAGAAGAAGAAGG
AAAAAAACCCTTTTTTTTTTCTCTCTATCAACTGTGTTAAGAAGAAGCCTTTTTGTGTTGCATTTTTGGTACTTTCATGTTGATCTAATCAAGTTGAATCCCTTGAAAAT
GATGGTTCTTTTGGAATCTTTTTCCCTTTTGTCTTTATCTTTTG
Protein sequenceShow/hide protein sequence
MFSTQSNPTTCHFPALSLYKILLLNDFHLVSGSPSIASPSIFPLLPIFPREFLKKVNSSLCFFHLLTRKHRILLSEKVKIAMATIAVSGATAATETQKKNRIQVSNTKKP
LFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKRVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPETVVAVEAAAEEEKKAEESK
EEQ