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PI0003805 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003805
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description50S ribosomal protein L2, chloroplastic
Genome locationtig00003626:1040827..1041252
RNA-Seq ExpressionPI0003805
SyntenyPI0003805
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR022669 - Ribosomal protein L2, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040685.1 Ribosomal protein L2 [Cucumis melo var. makuwa]2.9e-1980.88Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP
        MPLGT I NIEITLGKGGQLARAA AVAKLIAK  E+GHI+ITFWGGPFDIQKLLS SRTSG     P
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP

KAG8363837.1 hypothetical protein BUALT_Bualt19G0063800 [Buddleja alternifolia]1.7e-1980.88Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE--VGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP
        MPLGTAI NIEITLGKGGQL RAAG VAKLIAKE  +GHI+ITFWGGPFDIQKLLS SRTSG     P
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE--VGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP

OMP13859.1 Ribosomal protein L2 [Corchorus olitorius]1.0e-1683.61Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE--VGHIQITFWGGPFDIQKLLSKSRTS
        MPLGTAI NIEITLG+GGQLARAAGAVAKLIAKE     ++ITFWGGPFDIQKLLS SRTS
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE--VGHIQITFWGGPFDIQKLLSKSRTS

PWA49080.1 ribosomal protein L2, chloroplast [Artemisia annua]2.1e-1474.19Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSG
        M LGTAI NIEITLGKGGQLARAAG  ++   K  E+GHI+ITFWGGPFDIQKLLS SR  G
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSG

VDD24782.1 unnamed protein product [Brassica rapa]4.9e-1980.88Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP
        MPLGTAI NIEITLGKGGQLARAAGAVAKLI K  E+GHI+ITFW GPFDIQKLLS SRTSG     P
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP

TrEMBL top hitse value%identityAlignment
A0A1R3L3J3 Ribosomal protein L24.9e-1783.61Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE--VGHIQITFWGGPFDIQKLLSKSRTS
        MPLGTAI NIEITLG+GGQLARAAGAVAKLIAKE     ++ITFWGGPFDIQKLLS SRTS
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE--VGHIQITFWGGPFDIQKLLSKSRTS

A0A2U1LJA3 Ribosomal protein L2, chloroplast1.0e-1474.19Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSG
        M LGTAI NIEITLGKGGQLARAAG  ++   K  E+GHI+ITFWGGPFDIQKLLS SR  G
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSG

A0A3P6DW73 Ribosomal_L2_C domain-containing protein2.4e-1980.88Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP
        MPLGTAI NIEITLGKGGQLARAAGAVAKLI K  E+GHI+ITFW GPFDIQKLLS SRTSG     P
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP

A0A5A7TGW6 Ribosomal protein L21.4e-1980.88Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP
        MPLGT I NIEITLGKGGQLARAA AVAKLIAK  E+GHI+ITFWGGPFDIQKLLS SRTSG     P
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAK--EVGHIQITFWGGPFDIQKLLSKSRTSGGSQSPP

A0A6J5WZ92 Ribosomal_L2_C domain-containing protein2.8e-1270.59Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKEVGHIQITFWGGP--FDIQKLLSKSRTSGGSQSPP
        MPLGTAI NIEITLGKGGQLARAAGAVAKLIAKE     +    G   FDIQKLLS SRTSG     P
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKEVGHIQITFWGGP--FDIQKLLSKSRTSGGSQSPP

SwissProt top hitse value%identityAlignment
A0A377 50S ribosomal protein L2-A, chloroplastic9.6e-1097.06Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE
        MPLGTAI NIEITLGKGGQLARAAGAVAKLIAKE
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE

A6MMG4 50S ribosomal protein L2-A, chloroplastic9.6e-1097.06Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE
        MPLGTAI NIEITLGKGGQLARAAGAVAKLIAKE
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE

P18663 50S ribosomal protein L2-A, chloroplastic9.6e-1097.06Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE
        MPLGTAI NIEITLGKGGQLARAAGAVAKLIAKE
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE

Q0G9F5 50S ribosomal protein L2-A, chloroplastic9.6e-1097.06Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE
        MPLGTAI NIEITLGKGGQLARAAGAVAKLIAKE
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE

Q8S8V3 50S ribosomal protein L2-A, chloroplastic9.6e-1097.06Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE
        MPLGTAI NIEITLGKGGQLARAAGAVAKLIAKE
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE

Arabidopsis top hitse value%identityAlignment
ATCG00830.1 ribosomal protein L21.5e-1094.12Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE
        MPLGTAI NIEITLG+GGQLARAAGAVAKLIAKE
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE

ATCG01310.1 ribosomal protein L21.5e-1094.12Show/hide
Query:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE
        MPLGTAI NIEITLG+GGQLARAAGAVAKLIAKE
Subjt:  MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCTTAGGCACGGCCATAGATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCTGGTGCTGTAGCGAAACTGATTGCAAAAGAGGTCGGCCA
CATTCAAATTACCTTCTGGGGAGGTCCCTTTGATATCCAAAAATTGCTCAGCAAGAGTCGGACAAGTGGGGGCAGTCAGAGTCCTCCTCCGTCGAAGAAAGCCCTTAGTC
CGGAGGAGATAGTAAGATTTTACATAGTCAAGTCAATCATCAAAACCTTCGGACCACTAAAAGAGAAGAAAGCCTATCAAAAGGAGCCTACTAAACCTACTAAAAGAATC
TCCTCCTCCGCGAGTCCTTCTACGGAAGCGAAGCGACGGGTTCTAAGCCGCTCCGCTGATTATAGGATATCAGAAGCTAACCCACGGACTAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCTTAGGCACGGCCATAGATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCTGGTGCTGTAGCGAAACTGATTGCAAAAGAGGTCGGCCA
CATTCAAATTACCTTCTGGGGAGGTCCCTTTGATATCCAAAAATTGCTCAGCAAGAGTCGGACAAGTGGGGGCAGTCAGAGTCCTCCTCCGTCGAAGAAAGCCCTTAGTC
CGGAGGAGATAGTAAGATTTTACATAGTCAAGTCAATCATCAAAACCTTCGGACCACTAAAAGAGAAGAAAGCCTATCAAAAGGAGCCTACTAAACCTACTAAAAGAATC
TCCTCCTCCGCGAGTCCTTCTACGGAAGCGAAGCGACGGGTTCTAAGCCGCTCCGCTGATTATAGGATATCAGAAGCTAACCCACGGACTAAGTAG
Protein sequenceShow/hide protein sequence
MPLGTAIDNIEITLGKGGQLARAAGAVAKLIAKEVGHIQITFWGGPFDIQKLLSKSRTSGGSQSPPPSKKALSPEEIVRFYIVKSIIKTFGPLKEKKAYQKEPTKPTKRI
SSSASPSTEAKRRVLSRSADYRISEANPRTK