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PI0003806 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003806
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr03:9650594..9651886
RNA-Seq ExpressionPI0003806
SyntenyPI0003806
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0010073 - meristem maintenance (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-3049.1Show/hide
Query:  YLEEHTVMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA----------------
        Y+ +    RSNN RLRDVADD QQVLDICNNN+R+MEEIH MY +PIV   +HRGRV+VEEAELD+VYHNVEE+ P TQ QN                  
Subjt:  YLEEHTVMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA----------------

Query:  -------------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE
                                              EHNEYLY++APT+VSD QEYQQEPENQ+E
Subjt:  -------------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.6e-3153.42Show/hide
Query:  VMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA----------------------
        V RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIV  PVHRG VRVEEAELDKVYHNVEEV   TQTQ+                        
Subjt:  VMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA----------------------

Query:  -------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE
                                        EHNEYLY++AP DVSD QEYQQEPENQ++
Subjt:  -------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]6.0e-3153.46Show/hide
Query:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA------------------------
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIV  PVHRG VRVEEAELDKVYHNVEEV   TQTQ+                          
Subjt:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA------------------------

Query:  -----------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE
                                      EHNEYLY++AP DVSD QEYQQEPENQ++
Subjt:  -----------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.5e-3763.24Show/hide
Query:  TVMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAAA--------------------
        T++RSNN RLRDVADDPQQVLDICNNNERYMEEIH +YD+PIV  P+HRGRVRVEEAELD+VYH V+EVHP+TQTQ+                       
Subjt:  TVMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAAA--------------------

Query:  -------EHNEYLYYKAPTDVSDPQEYQQEPENQKE
               EHNEYLY++AP DVSD QEYQQEPENQ++
Subjt:  -------EHNEYLYYKAPTDVSDPQEYQQEPENQKE

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.0e-3151.25Show/hide
Query:  MRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA-----------------------
        +RSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PIV  PVHR R RVEEAELD+VYHNVEEV P TQTQ+                         
Subjt:  MRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA-----------------------

Query:  ------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE
                                       EHNEYLY++APTDVSD QEYQQEP+NQ++
Subjt:  ------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-3049.1Show/hide
Query:  YLEEHTVMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA----------------
        Y+ +    RSNN RLRDVADD QQVLDICNNN+R+MEEIH MY +PIV   +HRGRV+VEEAELD+VYHNVEE+ P TQ QN                  
Subjt:  YLEEHTVMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA----------------

Query:  -------------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE
                                              EHNEYLY++APT+VSD QEYQQEPENQ+E
Subjt:  -------------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.2e-3153.42Show/hide
Query:  VMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA----------------------
        V RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIV  PVHRG VRVEEAELDKVYHNVEEV   TQTQ+                        
Subjt:  VMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA----------------------

Query:  -------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE
                                        EHNEYLY++AP DVSD QEYQQEPENQ++
Subjt:  -------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X22.9e-3153.46Show/hide
Query:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA------------------------
        RSNN RLRDVADD QQ LDICNNNERYMEEIH MYD+PIV  PVHRG VRVEEAELDKVYHNVEEV   TQTQ+                          
Subjt:  RSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA------------------------

Query:  -----------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE
                                      EHNEYLY++AP DVSD QEYQQEPENQ++
Subjt:  -----------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X27.1e-3863.24Show/hide
Query:  TVMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAAA--------------------
        T++RSNN RLRDVADDPQQVLDICNNNERYMEEIH +YD+PIV  P+HRGRVRVEEAELD+VYH V+EVHP+TQTQ+                       
Subjt:  TVMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAAA--------------------

Query:  -------EHNEYLYYKAPTDVSDPQEYQQEPENQKE
               EHNEYLY++AP DVSD QEYQQEPENQ++
Subjt:  -------EHNEYLYYKAPTDVSDPQEYQQEPENQKE

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.9e-3151.25Show/hide
Query:  MRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA-----------------------
        +RSNN RLRDV +DPQQVLDICNNNERYME+IH +YD+PIV  PVHR R RVEEAELD+VYHNVEEV P TQTQ+                         
Subjt:  MRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAA-----------------------

Query:  ------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE
                                       EHNEYLY++APTDVSD QEYQQEP+NQ++
Subjt:  ------------------------------AEHNEYLYYKAPTDVSDPQEYQQEPENQKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCGATCATTTACTACTTGGAGGAGCACACGGTCATGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAA
TAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTAGCTTCACCAGTTCACAGAGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATAAAGTTT
ACCATAATGTAGAAGAAGTACATCCAGTGACACAAACACAAAATGCGGCTGCAGAACATAACGAATATCTGTACTATAAAGCACCTACAGACGTATCAGACCCACAAGAG
TACCAACAAGAACCAGAGAATCAAAAAGAGCCAGACAACCTAGAGTTCAGAGTCGACGACGACAACCAGCTCGACATCGACGACGTTTGGATTGTGGAACACATTGATTT
TCTTTTATCTTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCGATCATTTACTACTTGGAGGAGCACACGGTCATGAGATCGAACAACAGAAGACTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAA
TAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTAGCTTCACCAGTTCACAGAGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATAAAGTTT
ACCATAATGTAGAAGAAGTACATCCAGTGACACAAACACAAAATGCGGCTGCAGAACATAACGAATATCTGTACTATAAAGCACCTACAGACGTATCAGACCCACAAGAG
TACCAACAAGAACCAGAGAATCAAAAAGAGCCAGACAACCTAGAGTTCAGAGTCGACGACGACAACCAGCTCGACATCGACGACGTTTGGATTGTGGAACACATTGATTT
TCTTTTATCTTTTAAATGA
Protein sequenceShow/hide protein sequence
MKAIIYYLEEHTVMRSNNRRLRDVADDPQQVLDICNNNERYMEEIHYMYDVPIVASPVHRGRVRVEEAELDKVYHNVEEVHPVTQTQNAAAEHNEYLYYKAPTDVSDPQE
YQQEPENQKEPDNLEFRVDDDNQLDIDDVWIVEHIDFLLSFK