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PI0003823 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003823
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTetratricopeptide-like helical
Genome locationchr07:3671660..3671899
RNA-Seq ExpressionPI0003823
SyntenyPI0003823
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637184.1 hypothetical protein CSA_023573, partial [Cucumis sativus]3.0e-1883.33Show/hide
Query:  ALAMAGIDSNEWAMDAEEWETNTHQMENN--IPPHLLVDEDEEDITSTAKELCVSGHRKD
        ALAMAGIDSNEWAMDAEEW+TNTHQMEN+  IPPHLL DEDEE+I   AKELC+SGHRKD
Subjt:  ALAMAGIDSNEWAMDAEEWETNTHQMENN--IPPHLLVDEDEEDITSTAKELCVSGHRKD

KAE8649147.1 hypothetical protein Csa_014525, partial [Cucumis sativus]1.5e-2083.33Show/hide
Query:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENN--IPPHLLVDEDEEDITSTAKELCVSGHRKD
        M VSLEALAMAGIDSNEWAMDAEEW+TNTHQMEN+  IPPHLL DEDEE+I   AKELC+SGHRKD
Subjt:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENN--IPPHLLVDEDEEDITSTAKELCVSGHRKD

KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]4.7e-1172.22Show/hide
Query:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEED--ITST
        M+VSLEALAMAGI SNEWAMDAEEWE N  ++EN++PPHLL DED++D  +TST
Subjt:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEED--ITST

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-1157.32Show/hide
Query:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEED--ITSTAKELC--VSG-----HRKDA---DWWCF
        M+VSLEALAMAGI SNEWAMDAEEWE N  ++EN++PPHLL DED++D  +TST       V+G     HR+D    D  CF
Subjt:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEED--ITSTAKELC--VSG-----HRKDA---DWWCF

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]2.7e-1172.22Show/hide
Query:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEEDITSTAK
        M+VSLEALAMAGIDSNEWAMDAEEWE N  +ME +IPPHLL DED+E+   + K
Subjt:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEEDITSTAK

TrEMBL top hitse value%identityAlignment
A0A0A0KU90 Uncharacterized protein7.0e-2183.33Show/hide
Query:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENN--IPPHLLVDEDEEDITSTAKELCVSGHRKD
        M VSLEALAMAGIDSNEWAMDAEEW+TNTHQMEN+  IPPHLL DEDEE+I   AKELC+SGHRKD
Subjt:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENN--IPPHLLVDEDEEDITSTAKELCVSGHRKD

A0A0A0KWE7 Uncharacterized protein2.8e-0961.9Show/hide
Query:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDE------DEEDITSTAKELC
        M+VSLEALAMAGIDSNEWAMDAEEWE N   +   +PPHLL DE      DE   TST    C
Subjt:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDE------DEEDITSTAKELC

A0A5A7TS68 Tetratricopeptide-like helical3.6e-0962.3Show/hide
Query:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVD-EDEED---ITSTAKELC
        M+VSLEALAMAGIDSNEW MDA+EWE N   +   +PPHLL D ED+ED   +TST    C
Subjt:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVD-EDEED---ITSTAKELC

A0A5D3CZU0 Tetratricopeptide-like helical3.6e-0962.3Show/hide
Query:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVD-EDEED---ITSTAKELC
        M+VSLEALAMAGIDSNEW MDA+EWE N   +   +PPHLL D ED+ED   +TST    C
Subjt:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVD-EDEED---ITSTAKELC

A0A6J1FX98 uncharacterized protein LOC1114478801.3e-1172.22Show/hide
Query:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEEDITSTAK
        M+VSLEALAMAGIDSNEWAMDAEEWE N  +ME +IPPHLL DED+E+   + K
Subjt:  MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEEDITSTAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G22320.1 unknown protein9.1e-0547.73Show/hide
Query:  LEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEED
        +EALAMAG+D  EW +  EEWE      E+ +P HLL D+ +E+
Subjt:  LEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGTTTCTTTAGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGAGTGGGCTATGGATGCTGAAGAATGGGAAACAAATACTCATCAAATGGAGAACAACATTCC
ACCACATTTATTAGTCGACGAAGACGAAGAAGATATAACAAGTACAGCCAAGGAATTATGCGTTTCCGGTCACCGAAAAGATGCGGACTGGTGGTGTTTTGTGCTTTCCG
GCGATCATATGCCATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGGTTTCTTTAGAAGCTTTGGCAATGGCGGGGATTGATTCCAATGAGTGGGCTATGGATGCTGAAGAATGGGAAACAAATACTCATCAAATGGAGAACAACATTCC
ACCACATTTATTAGTCGACGAAGACGAAGAAGATATAACAAGTACAGCCAAGGAATTATGCGTTTCCGGTCACCGAAAAGATGCGGACTGGTGGTGTTTTGTGCTTTCCG
GCGATCATATGCCATTTTAA
Protein sequenceShow/hide protein sequence
MTVSLEALAMAGIDSNEWAMDAEEWETNTHQMENNIPPHLLVDEDEEDITSTAKELCVSGHRKDADWWCFVLSGDHMPF