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PI0003853 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003853
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr03:20469611..20470228
RNA-Seq ExpressionPI0003853
SyntenyPI0003853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]8.7e-0941.75Show/hide
Query:  DFRELEDATLAP-ESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQNEIQQDHAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQELAVK
        + + LED +L P  S     L++ VDDP  K    T + ASET  PSPPK+   Q D A E +D ++++K+I     KPM DG E++FQ QAN QE  ++
Subjt:  DFRELEDATLAP-ESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQNEIQQDHAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQELAVK

Query:  HEK
         +K
Subjt:  HEK

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]7.1e-1141.67Show/hide
Query:  RELEDATLA-PESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQN------EIQQDHAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL
        +E E+ TL      N   L++ +DDP  K  Q   E+AS+TR PSPPKQ+      + +Q  A  ++DD+D  ++K+INE V++P+  G E+VFQ QANL
Subjt:  RELEDATLA-PESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQN------EIQQDHAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL

Query:  QELAVKHEKQIVDLETKMDN
        QE  ++++K + DLE K D+
Subjt:  QELAVKHEKQIVDLETKMDN

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]2.3e-0953.25Show/hide
Query:  ETRAPSPPKQNEIQQDHAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQELAVKHEKQIVDLETKMDNYHQ
        ET AP P KQ   QQ +AA E+D+ED ++K+I +   KP+MDG ++VFQ Q +LQE   +HEKQI DLE K+DN +Q
Subjt:  ETRAPSPPKQNEIQQDHAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQELAVKHEKQIVDLETKMDNYHQ

TYK19850.1 hypothetical protein E5676_scaffold811G00610 [Cucumis melo var. makuwa]1.1e-0841.75Show/hide
Query:  DFRELEDATLAP-ESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQNEIQQDHAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQELAVK
        + + LED +L P  S     L++ VDDP  K    T + ASET  PSPPK+   Q D A E ++ ++++K+I     KPM DG E++FQ QAN QE  ++
Subjt:  DFRELEDATLAP-ESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQNEIQQDHAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQELAVK

Query:  HEK
         EK
Subjt:  HEK

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]7.1e-1141.67Show/hide
Query:  RELEDATLA-PESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQN------EIQQDHAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL
        +E E+ TL      N   L++ +DDP  K  Q   E+AS+TR PSPPKQ+      + +Q  A  ++DD+D  ++K+INE V++P+  G E+VFQ QANL
Subjt:  RELEDATLA-PESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQN------EIQQDHAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL

Query:  QELAVKHEKQIVDLETKMDN
        QE  ++++K + DLE K D+
Subjt:  QELAVKHEKQIVDLETKMDN

TrEMBL top hitse value%identityAlignment
A0A5A7T7V1 Uncharacterized protein4.2e-0941.75Show/hide
Query:  DFRELEDATLAP-ESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQNEIQQDHAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQELAVK
        + + LED +L P  S     L++ VDDP  K    T + ASET  PSPPK+   Q D A E +D ++++K+I     KPM DG E++FQ QAN QE  ++
Subjt:  DFRELEDATLAP-ESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQNEIQQDHAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQELAVK

Query:  HEK
         +K
Subjt:  HEK

A0A5A7TJU0 Uncharacterized protein3.4e-1141.67Show/hide
Query:  RELEDATLA-PESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQN------EIQQDHAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL
        +E E+ TL      N   L++ +DDP  K  Q   E+AS+TR PSPPKQ+      + +Q  A  ++DD+D  ++K+INE V++P+  G E+VFQ QANL
Subjt:  RELEDATLA-PESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQN------EIQQDHAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL

Query:  QELAVKHEKQIVDLETKMDN
        QE  ++++K + DLE K D+
Subjt:  QELAVKHEKQIVDLETKMDN

A0A5A7U0L9 Uncharacterized protein1.1e-0953.25Show/hide
Query:  ETRAPSPPKQNEIQQDHAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQELAVKHEKQIVDLETKMDNYHQ
        ET AP P KQ   QQ +AA E+D+ED ++K+I +   KP+MDG ++VFQ Q +LQE   +HEKQI DLE K+DN +Q
Subjt:  ETRAPSPPKQNEIQQDHAAEENDDED-FYKYINEAVAKPMMDGLEEVFQTQANLQELAVKHEKQIVDLETKMDNYHQ

A0A5D3D8Q5 Uncharacterized protein5.5e-0941.75Show/hide
Query:  DFRELEDATLAP-ESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQNEIQQDHAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQELAVK
        + + LED +L P  S     L++ VDDP  K    T + ASET  PSPPK+   Q D A E ++ ++++K+I     KPM DG E++FQ QAN QE  ++
Subjt:  DFRELEDATLAP-ESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQNEIQQDHAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQELAVK

Query:  HEK
         EK
Subjt:  HEK

A0A5D3E1H0 Uncharacterized protein3.4e-1141.67Show/hide
Query:  RELEDATLA-PESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQN------EIQQDHAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL
        +E E+ TL      N   L++ +DDP  K  Q   E+AS+TR PSPPKQ+      + +Q  A  ++DD+D  ++K+INE V++P+  G E+VFQ QANL
Subjt:  RELEDATLA-PESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQN------EIQQDHAAEENDDED--FYKYINEAVAKPMMDGLEEVFQTQANL

Query:  QELAVKHEKQIVDLETKMDN
        QE  ++++K + DLE K D+
Subjt:  QELAVKHEKQIVDLETKMDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACCTCTGCAATACGAAATTTAAAGATTTTAGAGAGTTAGAGGATGCGACGTTGGCACCTGAGTCGCAAAACACAATTTTTCTTGATGAGCCAGTTGATGACCC
ATCTCCCAAGGAAAATCAAACAACCCTTGAGGAGGCTAGTGAGACGCGGGCTCCTTCGCCGCCTAAGCAAAATGAAATTCAACAAGACCATGCGGCAGAAGAGAATGACG
ATGAAGATTTCTACAAGTACATCAATGAGGCAGTCGCCAAGCCAATGATGGATGGACTTGAAGAGGTCTTCCAAACCCAAGCCAATCTACAAGAACTTGCGGTGAAACAT
GAGAAGCAGATTGTGGACTTGGAAACAAAAATGGACAACTACCATCAATCGCAACACGACCAGCTCGCATCTGAAGTAGTGAGACTGAAGGAGCAAAACAAGGCGATGGT
GAGTTTGATCAAGAAGGCTTCCTCGCGGTCTGACAGGCAATACAAATCATTGATGAACTACATCCACGCGGCCATCACGAGACCCGTGCCTAAGCTTGCCATTCCGTCTG
AATTCGAAAACCCCATTTCTGATGATGAAGTGGATGTCGCGGTAAGACCTTCCGAGACGAGGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACCTCTGCAATACGAAATTTAAAGATTTTAGAGAGTTAGAGGATGCGACGTTGGCACCTGAGTCGCAAAACACAATTTTTCTTGATGAGCCAGTTGATGACCC
ATCTCCCAAGGAAAATCAAACAACCCTTGAGGAGGCTAGTGAGACGCGGGCTCCTTCGCCGCCTAAGCAAAATGAAATTCAACAAGACCATGCGGCAGAAGAGAATGACG
ATGAAGATTTCTACAAGTACATCAATGAGGCAGTCGCCAAGCCAATGATGGATGGACTTGAAGAGGTCTTCCAAACCCAAGCCAATCTACAAGAACTTGCGGTGAAACAT
GAGAAGCAGATTGTGGACTTGGAAACAAAAATGGACAACTACCATCAATCGCAACACGACCAGCTCGCATCTGAAGTAGTGAGACTGAAGGAGCAAAACAAGGCGATGGT
GAGTTTGATCAAGAAGGCTTCCTCGCGGTCTGACAGGCAATACAAATCATTGATGAACTACATCCACGCGGCCATCACGAGACCCGTGCCTAAGCTTGCCATTCCGTCTG
AATTCGAAAACCCCATTTCTGATGATGAAGTGGATGTCGCGGTAAGACCTTCCGAGACGAGGCTATAA
Protein sequenceShow/hide protein sequence
MQDLCNTKFKDFRELEDATLAPESQNTIFLDEPVDDPSPKENQTTLEEASETRAPSPPKQNEIQQDHAAEENDDEDFYKYINEAVAKPMMDGLEEVFQTQANLQELAVKH
EKQIVDLETKMDNYHQSQHDQLASEVVRLKEQNKAMVSLIKKASSRSDRQYKSLMNYIHAAITRPVPKLAIPSEFENPISDDEVDVAVRPSETRL