; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003884 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003884
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr09:16483727..16484440
RNA-Seq ExpressionPI0003884
SyntenyPI0003884
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059849.1 uncharacterized protein E6C27_scaffold108G001320 [Cucumis melo var. makuwa]6.7e-2941.98Show/hide
Query:  DTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALPRMFNALL
        + L  EL+GG ++ WS    I AA +SVKY ILHKI + NW P+ HAS+    L   +  I     VD G F  N L RH+ SF +KL IALPR F+ LL
Subjt:  DTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALPRMFNALL

Query:  LSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGD-----LLLPPALRNQILHVLSTSSRSFNSHIQNLTDQRSSI
        L     IL S +   P P  L LSYRLFQGSHV DI H++ PT      P    T D D       +   L ++IL+ L+  SRS  + I  ++++R  I
Subjt:  LSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGD-----LLLPPALRNQILHVLSTSSRSFNSHIQNLTDQRSSI

Query:  DSVIHSLWIILH
        DS+I  L    H
Subjt:  DSVIHSLWIILH

KAA0066488.1 uncharacterized protein E6C27_scaffold25G00260 [Cucumis melo var. makuwa]5.5e-3141.59Show/hide
Query:  MDLSATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLI
        ++ + + PS D L  EL+GGT++ W     I AA +SVKY ILHKI + NW P+ HAS+    L N +  I     VD G F  N L RH++SF +KL I
Subjt:  MDLSATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLI

Query:  ALPRMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPT--PTDLPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNL
        ALPR F+ LLL     IL + +   P P  L LSYRLFQG+HV DI H++  T  P      N     DG   +   L ++IL+ L+  SRS  + I  +
Subjt:  ALPRMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPT--PTDLPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNL

Query:  TDQRSSIDSVIHSL
        +++R  IDS+I  L
Subjt:  TDQRSSIDSVIHSL

TYJ98311.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]1.1e-2836.97Show/hide
Query:  DLSATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIA
        D + ++P+P+ L  ELTGGT+  W     +  A ++VKY ILH+I + NW  +MHAST    L + +  +GTG  V+ G F  N L RH+D+FAI +LI 
Subjt:  DLSATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIA

Query:  LPRMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNLTDQ
         PR+ +  +L+Q   IL S ++ G +P V+ LS RLFQG+H  D+                   P     L  +L N++L  L   SR+    I  LTD+
Subjt:  LPRMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNLTDQ

Query:  RSSIDSVIHSL
         + +D+VI  L
Subjt:  RSSIDSVIHSL

XP_008466770.1 PREDICTED: uncharacterized protein LOC103504101 [Cucumis melo]6.7e-2941.98Show/hide
Query:  DTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALPRMFNALL
        + L  EL+GG ++ WS    I AA +SVKY ILHKI + NW P+ HAS+    L   +  I     VD G F  N L RH+ SF +KL IALPR F+ LL
Subjt:  DTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALPRMFNALL

Query:  LSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGD-----LLLPPALRNQILHVLSTSSRSFNSHIQNLTDQRSSI
        L     IL S +   P P  L LSYRLFQGSHV DI H++ PT      P    T D D       +   L ++IL+ L+  SRS  + I  ++++R  I
Subjt:  LSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGD-----LLLPPALRNQILHVLSTSSRSFNSHIQNLTDQRSSI

Query:  DSVIHSLWIILH
        DS+I  L    H
Subjt:  DSVIHSLWIILH

XP_016903164.1 PREDICTED: uncharacterized protein LOC107992057 [Cucumis melo]4.6e-3039.52Show/hide
Query:  SATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALP
        S T PS + L + L+GG ++ W  +  I    +SVKY ILHKI + NW P+ HA +  + L   +  I     VD  TF  N L RH++SF +K+ IALP
Subjt:  SATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALP

Query:  RMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTD-LPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNLTDQR
        R F+ LLL     +L+     GP+P  L LSYRLFQGSHV DIVH++ P+    + + ND         +   L ++I++ L+T SR+ ++ I  L+++R
Subjt:  RMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTD-LPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNLTDQR

Query:  SSIDSVIHSL
          +DS+IH L
Subjt:  SSIDSVIHSL

TrEMBL top hitse value%identityAlignment
A0A1S3CS20 uncharacterized protein LOC1035041013.2e-2941.98Show/hide
Query:  DTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALPRMFNALL
        + L  EL+GG ++ WS    I AA +SVKY ILHKI + NW P+ HAS+    L   +  I     VD G F  N L RH+ SF +KL IALPR F+ LL
Subjt:  DTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALPRMFNALL

Query:  LSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGD-----LLLPPALRNQILHVLSTSSRSFNSHIQNLTDQRSSI
        L     IL S +   P P  L LSYRLFQGSHV DI H++ PT      P    T D D       +   L ++IL+ L+  SRS  + I  ++++R  I
Subjt:  LSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGD-----LLLPPALRNQILHVLSTSSRSFNSHIQNLTDQRSSI

Query:  DSVIHSLWIILH
        DS+I  L    H
Subjt:  DSVIHSLWIILH

A0A1S4E4L2 uncharacterized protein LOC1079920572.2e-3039.52Show/hide
Query:  SATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALP
        S T PS + L + L+GG ++ W  +  I    +SVKY ILHKI + NW P+ HA +  + L   +  I     VD  TF  N L RH++SF +K+ IALP
Subjt:  SATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALP

Query:  RMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTD-LPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNLTDQR
        R F+ LLL     +L+     GP+P  L LSYRLFQGSHV DIVH++ P+    + + ND         +   L ++I++ L+T SR+ ++ I  L+++R
Subjt:  RMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTD-LPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNLTDQR

Query:  SSIDSVIHSL
          +DS+IH L
Subjt:  SSIDSVIHSL

A0A5A7VFI0 Uncharacterized protein2.7e-3141.59Show/hide
Query:  MDLSATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLI
        ++ + + PS D L  EL+GGT++ W     I AA +SVKY ILHKI + NW P+ HAS+    L N +  I     VD G F  N L RH++SF +KL I
Subjt:  MDLSATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLI

Query:  ALPRMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPT--PTDLPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNL
        ALPR F+ LLL     IL + +   P P  L LSYRLFQG+HV DI H++  T  P      N     DG   +   L ++IL+ L+  SRS  + I  +
Subjt:  ALPRMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPT--PTDLPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNL

Query:  TDQRSSIDSVIHSL
        +++R  IDS+I  L
Subjt:  TDQRSSIDSVIHSL

A0A5D3BI15 Flocculation protein FLO11-like5.5e-2936.97Show/hide
Query:  DLSATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIA
        D + ++P+P+ L  ELTGGT+  W     +  A ++VKY ILH+I + NW  +MHAST    L + +  +GTG  V+ G F  N L RH+D+FAI +LI 
Subjt:  DLSATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIA

Query:  LPRMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNLTDQ
         PR+ +  +L+Q   IL S ++ G +P V+ LS RLFQG+H  D+                   P     L  +L N++L  L   SR+    I  LTD+
Subjt:  LPRMFNALLLSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNLTDQ

Query:  RSSIDSVIHSL
         + +D+VI  L
Subjt:  RSSIDSVIHSL

A0A5D3DMD7 Uncharacterized protein3.2e-2941.98Show/hide
Query:  DTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALPRMFNALL
        + L  EL+GG ++ WS    I AA +SVKY ILHKI + NW P+ HAS+    L   +  I     VD G F  N L RH+ SF +KL IALPR F+ LL
Subjt:  DTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALPRMFNALL

Query:  LSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGD-----LLLPPALRNQILHVLSTSSRSFNSHIQNLTDQRSSI
        L     IL S +   P P  L LSYRLFQGSHV DI H++ PT      P    T D D       +   L ++IL+ L+  SRS  + I  ++++R  I
Subjt:  LSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGD-----LLLPPALRNQILHVLSTSSRSFNSHIQNLTDQRSSI

Query:  DSVIHSLWIILH
        DS+I  L    H
Subjt:  DSVIHSLWIILH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGTCAGCTACCCATCCTTCTCCTGATACTCTTGTTTATGAGTTGACCGGTGGGACTATAACCTTTTGGTCTACTCTCGCTTATATATTTGCTGCCAAAATAAG
CGTCAAATATGTCATCTTGCATAAAATTCGAATGCACAATTGGTGTCCCACAATGCATGCTTCTACTTTCTGTCTACCCTTGGCCAATCTCATCAACTCAATTGGCACTG
GCAGTCCCGTTGATTTTGGAACCTTTGCAGTCAATCTCCTAAGGCGTCACATTGACTCCTTTGCAATAAAGCTTCTTATCGCTTTACCTCGAATGTTCAATGCGCTTCTC
CTATCTCAATGCCCCTTTATTCTCCAATCAGGTGAGGTTCATGGTCCTTCTCCTAATGTTCTTCATCTAAGTTACAGATTGTTTCAGGGAAGCCATGTTTTTGACATTGT
GCACAACATTCGTCCTACTCCTACTGATCTACCTCATCCAAATGATCTTCGTACCCCTGATGGTGATTTATTGCTCCCTCCAGCCTTGAGGAACCAAATTCTTCATGTTC
TTTCAACATCCTCTAGAAGTTTCAACAGTCACATTCAGAATTTAACTGATCAAAGAAGCTCCATTGACTCAGTTATTCACTCCTTATGGATCATTTTACATCAAGATGAA
GGCTCCTCTGATCCTGTTCCTGGTTCCTCTACTGTTGATTATGCGTTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGTCAGCTACCCATCCTTCTCCTGATACTCTTGTTTATGAGTTGACCGGTGGGACTATAACCTTTTGGTCTACTCTCGCTTATATATTTGCTGCCAAAATAAG
CGTCAAATATGTCATCTTGCATAAAATTCGAATGCACAATTGGTGTCCCACAATGCATGCTTCTACTTTCTGTCTACCCTTGGCCAATCTCATCAACTCAATTGGCACTG
GCAGTCCCGTTGATTTTGGAACCTTTGCAGTCAATCTCCTAAGGCGTCACATTGACTCCTTTGCAATAAAGCTTCTTATCGCTTTACCTCGAATGTTCAATGCGCTTCTC
CTATCTCAATGCCCCTTTATTCTCCAATCAGGTGAGGTTCATGGTCCTTCTCCTAATGTTCTTCATCTAAGTTACAGATTGTTTCAGGGAAGCCATGTTTTTGACATTGT
GCACAACATTCGTCCTACTCCTACTGATCTACCTCATCCAAATGATCTTCGTACCCCTGATGGTGATTTATTGCTCCCTCCAGCCTTGAGGAACCAAATTCTTCATGTTC
TTTCAACATCCTCTAGAAGTTTCAACAGTCACATTCAGAATTTAACTGATCAAAGAAGCTCCATTGACTCAGTTATTCACTCCTTATGGATCATTTTACATCAAGATGAA
GGCTCCTCTGATCCTGTTCCTGGTTCCTCTACTGTTGATTATGCGTTTTTCTAG
Protein sequenceShow/hide protein sequence
MDLSATHPSPDTLVYELTGGTITFWSTLAYIFAAKISVKYVILHKIRMHNWCPTMHASTFCLPLANLINSIGTGSPVDFGTFAVNLLRRHIDSFAIKLLIALPRMFNALL
LSQCPFILQSGEVHGPSPNVLHLSYRLFQGSHVFDIVHNIRPTPTDLPHPNDLRTPDGDLLLPPALRNQILHVLSTSSRSFNSHIQNLTDQRSSIDSVIHSLWIILHQDE
GSSDPVPGSSTVDYAFF