; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003897 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003897
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionplastid transcriptionally active 6
Genome locationchr07:19987767..19990631
RNA-Seq ExpressionPI0003897
SyntenyPI0003897
Gene Ontology termsGO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component)
InterPro domainsIPR044710 - PLASTID TRANSCRIPTIONALLY ACTIVE protein 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052214.1 uncharacterized protein E6C27_scaffold207G00250 [Cucumis melo var. makuwa]4.7e-18597.92Show/hide
Query:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPP TINRLRASSISA TSLPHLPSLPYRKSTPSAS LFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

KAG6591867.1 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-17895.27Show/hide
Query:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AA
        MNSTVFLLSSPLPPATI+RLR  SISA +SL HLPSLPYRKSTPSAS LF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L AA
Subjt:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-AA

Query:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
        AAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA
Subjt:  AAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCA

Query:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS
        QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+ DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKIIHS
Subjt:  QSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHS

Query:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  SERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_008444205.1 PREDICTED: uncharacterized protein LOC103487613 [Cucumis melo]1.5e-18698.22Show/hide
Query:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPP TINRLRASSISA TSLPHLPSLPYRKSTPSAS LFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_031740569.1 uncharacterized protein LOC101213327 [Cucumis sativus]2.0e-18396.44Show/hide
Query:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLSSPLPP TINRLR SSIS+  SLPHLPSLPY K+TP AS LFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPD+DVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPID+PRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

XP_038896770.1 uncharacterized protein LOC120085024 [Benincasa hispida]2.3e-18497.33Show/hide
Query:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTV L+SSPL PATINRLRASSISA +SLPHLPSLPYRKSTPS S LF PRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

TrEMBL top hitse value%identityAlignment
A0A1S3BAM8 uncharacterized protein LOC1034876137.0e-18798.22Show/hide
Query:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPP TINRLRASSISA TSLPHLPSLPYRKSTPSAS LFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5A7UA32 Uncharacterized protein2.3e-18597.92Show/hide
Query:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        MNSTVFLLS PLPP TINRLRASSISA TSLPHLPSLPYRKSTPSAS LFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
Subjt:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+RDPEFVLDFEEIYVIDSKTKSITRA+VLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISN F
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A5J5BWI0 Uncharacterized protein9.0e-14275.96Show/hide
Query:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA
        M +T+ L   PL P      +   ++ VTSL   P+L +    P  + +F PR + FRV++DDGD D GGPDDYDMD+EE+EEVDNKKD+D+EYDPLAAA
Subjt:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAA

Query:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ
        AA+A G  G GD++I +V SKSFVS QGWDSE IVDYRINE+EFHKISLL CDFFIRKPPDPDNDVYDFREMYVTPPDTD+YAIP+VLAP+PQKYIRCA+
Subjt:  AAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQ

Query:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS
        SDYGCYNVTEPPIDAPRDPLYKSE E+ KVFLTKH+RNRR+ DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR+RDR+ DLLV+RDNGNSFKIIHSS
Subjt:  SDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSS

Query:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        +R+DPTTVIE+EEW KTRQDMERHLRKLRDFS+SNWF
Subjt:  ERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1F6A7 uncharacterized protein LOC1114425721.3e-17794.41Show/hide
Query:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---
        MNSTVFLLSSPLPPATI+RLR  SISA +SL HLPSL YRKSTPSAS LF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L   
Subjt:  MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL---

Query:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
        AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR
Subjt:  AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIR

Query:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII
        CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+ DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFKII
Subjt:  CAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKII

Query:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  HSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

A0A6J1IGR4 uncharacterized protein LOC1114770762.7e-17894.44Show/hide
Query:  MNSTVFLLSS--PLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-
        MNSTVFLLSS  PLPPATI+RLR  SISA +SLPHLPSLPYRKSTPSAS LF+PRRNPFRVFSDDGDGDSGGPDDYDM D+EMEEVDNKKDFDIEYD L 
Subjt:  MNSTVFLLSS--PLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPL-

Query:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
          AAAAAAAAGS+GVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY
Subjt:  --AAAAAAAAGSDGVGDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKY

Query:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK
        IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRR+ DPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGR RDRRSDLLVVRDNGNSFK
Subjt:  IRCAQSDYGCYNVTEPPIDAPRDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFK

Query:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
        IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF
Subjt:  IIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRDFSISNWF

SwissProt top hitse value%identityAlignment
Q9XI19 PLASTID TRANSCRIPTIONALLY ACTIVE protein 6, chloroplastic1.8e-13474.77Show/hide
Query:  SISAVTSLPHLPSLPYRK-STPSASSLFLP------RRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ + TS P  PS   R  ++     LF P      R     V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISAVTSLPHLPSLPYRK-STPSASSLFLP------RRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAP
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTK
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK

Query:  TRQDMERHLRKLRDFSISNWF
        TR+DME+HLRKLRDFS+SNWF
Subjt:  TRQDMERHLRKLRDFSISNWF

Arabidopsis top hitse value%identityAlignment
AT1G21600.1 plastid transcriptionally active 61.2e-13574.77Show/hide
Query:  SISAVTSLPHLPSLPYRK-STPSASSLFLP------RRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ + TS P  PS   R  ++     LF P      R     V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISAVTSLPHLPSLPYRK-STPSASSLFLP------RRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAP
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTK
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK

Query:  TRQDMERHLRKLRDFSISNWF
        TR+DME+HLRKLRDFS+SNWF
Subjt:  TRQDMERHLRKLRDFSISNWF

AT1G21600.2 plastid transcriptionally active 61.2e-13574.77Show/hide
Query:  SISAVTSLPHLPSLPYRK-STPSASSLFLP------RRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS
        S+ + TS P  PS   R  ++     LF P      R     V  DD D D GG D+YDMDDEE+EEVDNKKD+D+EYDPLAAA AAA G    GD +I+
Subjt:  SISAVTSLPHLPSLPYRK-STPSASSLFLP------RRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGVGDENIS

Query:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP
         VQSKSF+STQGWDS+M+VDYRINE+EFHK+SL+ CDFFIRKPPDPDNDVYDFREMYVTPPDTD+Y+IP+VLAPMPQKYIRCA SDYGCYNVTEPPIDAP
Subjt:  IVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAP

Query:  RDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK
        RDPLYKSE+E+ KVFLTKH+RNRR  DPEFVLD EEIYVIDSKTKSITRA+VLVTVPGGR RDR+ DLLV+RDNG SFKIIH  ERDDPTTVIE+EEWTK
Subjt:  RDPLYKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTK

Query:  TRQDMERHLRKLRDFSISNWF
        TR+DME+HLRKLRDFS+SNWF
Subjt:  TRQDMERHLRKLRDFSISNWF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCCACTGTCTTCCTCCTCTCCTCGCCGTTGCCGCCGGCCACAATCAACCGTCTCCGAGCCTCCTCCATCTCAGCCGTAACCTCTCTTCCCCACCTCCCAAGCCT
GCCCTACCGGAAATCCACTCCCTCTGCGTCTTCTCTCTTCCTCCCTAGAAGAAACCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGCGGTCCCGATGACT
ACGACATGGATGACGAGGAAATGGAGGAAGTCGACAACAAGAAAGATTTCGACATCGAGTACGATCCTCTAGCCGCAGCGGCAGCTGCAGCAGCGGGTTCCGACGGCGTC
GGCGACGAGAATATCTCGATTGTGCAGAGCAAAAGCTTCGTGTCCACACAGGGATGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAATTTCATAAGAT
TAGTTTGTTGCACTGTGATTTCTTCATTAGGAAGCCGCCGGATCCCGACAACGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCAGATACTGATGTTTATGCCA
TCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGTATATTAGATGTGCTCAGAGTGATTATGGATGTTACAATGTCACAGAACCACCTATTGATGCACCTAGAGATCCATTA
TACAAGTCCGAAAAGGAGGTTCTTAAGGTTTTCTTGACGAAACACTTCAGAAACCGAAGGGTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGA
TTCAAAAACCAAGTCGATCACCAGGGCAAAAGTCCTGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGAGACAACGGGAACTCTT
TCAAGATCATCCATTCGAGTGAACGTGATGACCCAACCACGGTGATAGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGAC
TTCAGCATTTCAAATTGGTTTTAA
mRNA sequenceShow/hide mRNA sequence
CTGACAGTAACCATCGACAGACTCAACATAAGAGCGTTCGACCTCTCCGGCGGCCGCTTCACAGAGTTCGCGTCCTCATGAACTCCACTGTCTTCCTCCTCTCCTCGCCG
TTGCCGCCGGCCACAATCAACCGTCTCCGAGCCTCCTCCATCTCAGCCGTAACCTCTCTTCCCCACCTCCCAAGCCTGCCCTACCGGAAATCCACTCCCTCTGCGTCTTC
TCTCTTCCTCCCTAGAAGAAACCCTTTCCGAGTCTTCTCCGACGATGGCGACGGAGATAGCGGCGGTCCCGATGACTACGACATGGATGACGAGGAAATGGAGGAAGTCG
ACAACAAGAAAGATTTCGACATCGAGTACGATCCTCTAGCCGCAGCGGCAGCTGCAGCAGCGGGTTCCGACGGCGTCGGCGACGAGAATATCTCGATTGTGCAGAGCAAA
AGCTTCGTGTCCACACAGGGATGGGATTCGGAGATGATTGTGGATTATAGGATAAATGAGGAGGAATTTCATAAGATTAGTTTGTTGCACTGTGATTTCTTCATTAGGAA
GCCGCCGGATCCCGACAACGATGTTTATGATTTCAGAGAGATGTATGTTACTCCTCCAGATACTGATGTTTATGCCATCCCCAAAGTTCTTGCTCCAATGCCTCAGAAGT
ATATTAGATGTGCTCAGAGTGATTATGGATGTTACAATGTCACAGAACCACCTATTGATGCACCTAGAGATCCATTATACAAGTCCGAAAAGGAGGTTCTTAAGGTTTTC
TTGACGAAACACTTCAGAAACCGAAGGGTGCGTGACCCAGAATTTGTCCTAGACTTTGAGGAAATATATGTAATTGATTCAAAAACCAAGTCGATCACCAGGGCAAAAGT
CCTGGTCACAGTTCCAGGAGGAAGAGATAGGGACAGGAGAAGCGACTTGCTCGTAGTTCGAGACAACGGGAACTCTTTCAAGATCATCCATTCGAGTGAACGTGATGACC
CAACCACGGTGATAGAGAAAGAAGAGTGGACCAAAACTAGACAAGATATGGAGAGACATCTTAGGAAGTTAAGGGACTTCAGCATTTCAAATTGGTTTTAAACAACACCA
TTCAACCTGCAAAAGTCGTCTCAGCATCCTCATCTATTTAGAAGTGAGGACAAGAAATGTGATTTCAAAGTTTTAAACATGACTGGGACGGCCGACTTACCTGTCACGAT
GATTCTCTCGTGCGAGTTCTCGATGTATCTCCTACCTATGCTCTTGTGATCGGTATAGAGTTCCATTATGGCTAGTTTACACTTGCAGTGATTGTTCTTGATTCATTCTG
CTCGCTTTCAATTTTCGTCGTGAGATAAGAGTCCATTAATCTAGGAGAGGTAGCTTTTTGTAGATTTTTAATGCTGAGAGAATTCACAAAAGCTATTGACGTGCAAAGGA
AAAACAAAACAAAACAAAAGTGTAGAACGGCTTCTAGCTAGCTTCCAATGAGAGTATTTTCTATTGTAAGTAGCGAAACTTTTGAGCGCCAAATAGGTCGAGTATTAGGA
GATTTGAACCTCCATTTGAGTAATGTCATAATTATTGATTTA
Protein sequenceShow/hide protein sequence
MNSTVFLLSSPLPPATINRLRASSISAVTSLPHLPSLPYRKSTPSASSLFLPRRNPFRVFSDDGDGDSGGPDDYDMDDEEMEEVDNKKDFDIEYDPLAAAAAAAAGSDGV
GDENISIVQSKSFVSTQGWDSEMIVDYRINEEEFHKISLLHCDFFIRKPPDPDNDVYDFREMYVTPPDTDVYAIPKVLAPMPQKYIRCAQSDYGCYNVTEPPIDAPRDPL
YKSEKEVLKVFLTKHFRNRRVRDPEFVLDFEEIYVIDSKTKSITRAKVLVTVPGGRDRDRRSDLLVVRDNGNSFKIIHSSERDDPTTVIEKEEWTKTRQDMERHLRKLRD
FSISNWF