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PI0003898 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003898
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr12:7734776..7736533
RNA-Seq ExpressionPI0003898
SyntenyPI0003898
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039579.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.1e-1141.28Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        MALQQ++ +F+G+W ES +Y DYR ++VY+P  SSFQ+F + IQ                               DKDVSW+ML+LSK P N L +VVDT
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMSGTSRNT
        V +  + NT
Subjt:  VMSGTSRNT

KAA0047392.1 uncharacterized protein E6C27_scaffold754G00490 [Cucumis melo var. makuwa]5.7e-1140.37Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        MALQ+++ +F G+W ES +Y DYR ++VY+P  SSFQ+F + IQ                               DKDVSW+ML++SK P NDL VVV+T
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMSGTSRNT
        V +    NT
Subjt:  VMSGTSRNT

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]2.3e-1241.28Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        MALQ+++ +F+G+W ES +Y DYR ++VY+P  SSFQ+FV+ IQ                               DKDVSW+ML+LSK+P NDL +VVDT
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMSGTSRNT
          +    NT
Subjt:  VMSGTSRNT

TYK14069.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]5.7e-1140.37Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        MALQ+++ +F G+W ES +Y DYR ++VY+P  SSFQ+F + IQ                               DKDVSW+ML++SK P NDL VVV+T
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMSGTSRNT
        V +    NT
Subjt:  VMSGTSRNT

XP_038887125.1 uncharacterized protein LOC120077310 [Benincasa hispida]6.7e-1241.96Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        M LQ+++++F G+W E+SQYHD+RD + YIPS+SSFQQFV+ IQ                               DK + WLML+L   P+ DLCVVVD 
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMS--GTSRNTV
        V S    S+NT+
Subjt:  VMS--GTSRNTV

TrEMBL top hitse value%identityAlignment
A0A5A7TEC9 Protein FAR1-RELATED SEQUENCE 2-like5.5e-1241.28Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        MALQQ++ +F+G+W ES +Y DYR ++VY+P  SSFQ+F + IQ                               DKDVSW+ML+LSK P N L +VVDT
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMSGTSRNT
        V +  + NT
Subjt:  VMSGTSRNT

A0A5A7TVA6 Uncharacterized protein2.7e-1140.37Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        MALQ+++ +F G+W ES +Y DYR ++VY+P  SSFQ+F + IQ                               DKDVSW+ML++SK P NDL VVV+T
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMSGTSRNT
        V +    NT
Subjt:  VMSGTSRNT

A0A5A7VAU3 MuDRA-like transposase3.6e-1139.45Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        MALQ+++ +F+ +W ES +Y DYR ++VY+P  SSFQ+F + IQ                               DKDVSW+ML+LSK P NDL +VVDT
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMSGTSRNT
          +    NT
Subjt:  VMSGTSRNT

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like1.1e-1241.28Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        MALQ+++ +F+G+W ES +Y DYR ++VY+P  SSFQ+FV+ IQ                               DKDVSW+ML+LSK+P NDL +VVDT
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMSGTSRNT
          +    NT
Subjt:  VMSGTSRNT

A0A5D3CUZ6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like2.7e-1140.37Show/hide
Query:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT
        MALQ+++ +F G+W ES +Y DYR ++VY+P  SSFQ+F + IQ                               DKDVSW+ML++SK P NDL VVV+T
Subjt:  MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQ-------------------------------DKDVSWLMLLLSKVPQNDLCVVVDT

Query:  VMSGTSRNT
        V +    NT
Subjt:  VMSGTSRNT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTACAACAAATAAGGGTGATTTTTTATGGTAAATGGACTGAAAGTTCCCAATATCATGATTATCGTGATGTTGAGGTTTACATTCCATCGGATTCTTCATTCCA
ACAATTTGTAGATTCCATTCAAGATAAGGATGTCTCGTGGCTTATGTTGCTTTTATCAAAAGTCCCTCAAAATGATTTATGCGTTGTTGTTGACACTGTGATGTCTGGGA
CTTCGAGAAATACAGTACGAGGAAGGCTCGACGTGGACGGCTCCCAAACGCTGGTAGCAACTCAGACGGGAAGAAGGAACAGTGGATCAGACGAAAAAAAGGAACGACTC
GCAGACGATGGTAGCGACGAGAAAGGAACGGTGGCGCAGAGACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTACAACAAATAAGGGTGATTTTTTATGGTAAATGGACTGAAAGTTCCCAATATCATGATTATCGTGATGTTGAGGTTTACATTCCATCGGATTCTTCATTCCA
ACAATTTGTAGATTCCATTCAAGATAAGGATGTCTCGTGGCTTATGTTGCTTTTATCAAAAGTCCCTCAAAATGATTTATGCGTTGTTGTTGACACTGTGATGTCTGGGA
CTTCGAGAAATACAGTACGAGGAAGGCTCGACGTGGACGGCTCCCAAACGCTGGTAGCAACTCAGACGGGAAGAAGGAACAGTGGATCAGACGAAAAAAAGGAACGACTC
GCAGACGATGGTAGCGACGAGAAAGGAACGGTGGCGCAGAGACGTTGA
Protein sequenceShow/hide protein sequence
MALQQIRVIFYGKWTESSQYHDYRDVEVYIPSDSSFQQFVDSIQDKDVSWLMLLLSKVPQNDLCVVVDTVMSGTSRNTVRGRLDVDGSQTLVATQTGRRNSGSDEKKERL
ADDGSDEKGTVAQRR