; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0003905 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003905
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr10:1384027..1385232
RNA-Seq ExpressionPI0003905
SyntenyPI0003905
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032916.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.8e-9345.52Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF     + D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-
        +L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + + L    Y 
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-

Query:  --DLNDLFLDSQP
          D+ND FLD+QP
Subjt:  --DLNDLFLDSQP

KAA0032923.1 polyprotein [Cucumis melo var. makuwa]5.9e-9446Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K   I D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-
        +L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + + L    Y 
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-

Query:  --DLNDLFLDSQP
          D+ND FLD+QP
Subjt:  --DLNDLFLDSQP

KAA0056777.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]5.0e-9345.28Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K   + D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLL-STAVNASSS--------SKSASSSIQEDEKLASP
        +L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  ++ +  VN S          S ++ +++ + +     
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLL-STAVNASSS--------SKSASSSIQEDEKLASP

Query:  EYDLNDLFLDSQP
          D+ND FLD+QP
Subjt:  EYDLNDLFLDSQP

KAA0063832.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.8e-9345.28Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K   + D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-
        +L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   +      Y 
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-

Query:  --DLNDLFLDSQP
          D+ND FLD+QP
Subjt:  --DLNDLFLDSQP

TYK28077.1 polyprotein [Cucumis melo var. makuwa]1.0e-9345.76Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K   + D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-
        +L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + + L    Y 
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-

Query:  --DLNDLFLDSQP
          D+ND FLD+QP
Subjt:  --DLNDLFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein2.9e-9446Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K   I D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-
        +L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + + L    Y 
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-

Query:  --DLNDLFLDSQP
          D+ND FLD+QP
Subjt:  --DLNDLFLDSQP

A0A5A7SS94 Retrotransposable element Tf21.9e-9345.52Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF     + D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-
        +L+IKWW+K+N+ H  +  +K+WF  N +LQD+  +++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + + L    Y 
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-

Query:  --DLNDLFLDSQP
          D+ND FLD+QP
Subjt:  --DLNDLFLDSQP

A0A5A7UVN1 Retrotransposable element Tf22.4e-9345.28Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K   + D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLL-STAVNASSS--------SKSASSSIQEDEKLASP
        +L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  ++ +  VN S          S ++ +++ + +     
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLL-STAVNASSS--------SKSASSSIQEDEKLASP

Query:  EYDLNDLFLDSQP
          D+ND FLD+QP
Subjt:  EYDLNDLFLDSQP

A0A5A7V6D1 Retrotransposable element Tf21.9e-9345.28Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T  +  ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K   + D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  +Q SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-
        +L+IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N       + +S+   +      Y 
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-

Query:  --DLNDLFLDSQP
          D+ND FLD+QP
Subjt:  --DLNDLFLDSQP

A0A5D3DW87 Polyprotein4.9e-9445.76Show/hide
Query:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII
        MDL F  V+R +  S+   +   ++SS+ PP PS  L+RPSG  T     ASP  S+  S+ P  P++YSQ V P K F PRP I  YF K   + D  I
Subjt:  MDLGFTTVTRSKARSSGIRIESPTESST-PPRPSANLVRPSGGITQMRPPASP-LSNLESSTP--PTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPII

Query:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI
        EPE+   ++ E  S+IFP GFNFLPEDL KTR FYE+ILVD+KS EI HVPDKNDPSKI YSKL+IF+ + P++W Q +F  + FS PF P SY+Y+DY 
Subjt:  EPEYQSLTLDETVSKIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYI

Query:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK
        KAW+ V W  + NHSWF++FC+ AYK++FP WF  WW  FGL+++I P  IQ SY  F ++I  +    + RF LYFQIPWIFCW+F       +K L K
Subjt:  KAWFRVVWYSSRNHSWFISFCQNAYKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVK

Query:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-
        +L IKWW+K+N+ H  +  +K+WF  N +LQD+ ++++  FL  K+ +++ LA A+T  +F  +++  V      N      ++ +S+ + + L    Y 
Subjt:  NLKIKWWDKYNFQHATIKHMKEWFAENGYLQDIDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAV------NASSSSKSASSSIQEDEKLASPEY-

Query:  --DLNDLFLDSQP
          D+ND FLD+QP
Subjt:  --DLNDLFLDSQP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGT
CCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAAC
GGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGCCTCACTCTCGATGAGACAGTTTCA
AAAATCTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACCAGGAAATTTTACGAGTTTATTTTAGTGGACACAAAGTCTGTTGAAATTATTCATGTTCC
TGACAAGAACGACCCTTCAAAGATCGCTTATTCCAAATTAAAAATTTTCAAAGCGATAAATCCAACTCATTGGAACCAAAGGATTTTTACAGAAAAATCCTTCTCAAAAC
CTTTCGTACCCCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCT
TACAAAATAAATTTTCCGCTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAAC
AATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTTAACACAGCTTCTTATCCACAATACAAGATGT
TAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATTAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGAT
CAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCGAAACTTCTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGC
CTCTTCAAGCTCAAAATCAGCATCTTCCTCCATACAGGAAGATGAAAAATTGGCAAGCCCGGAATACGATCTAAATGATCTGTTTCTCGACTCACAGCCCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTGT
CCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTGTCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTCAGGCCGTCGCTCCAGAAAAAC
GGTTCATACCAAGGCCCGAGATCAAAACCTATTTTCAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGCCTCACTCTCGATGAGACAGTTTCA
AAAATCTTCCCTGAGGGCTTTAATTTCCTTCCTGAAGACCTCAGAAAAACCAGGAAATTTTACGAGTTTATTTTAGTGGACACAAAGTCTGTTGAAATTATTCATGTTCC
TGACAAGAACGACCCTTCAAAGATCGCTTATTCCAAATTAAAAATTTTCAAAGCGATAAATCCAACTCATTGGAACCAAAGGATTTTTACAGAAAAATCCTTCTCAAAAC
CTTTCGTACCCCAATCCTACTCTTACCAGGATTACATCAAAGCTTGGTTTAGAGTTGTTTGGTATTCTAGCAGAAACCATTCATGGTTTATTTCTTTCTGCCAGAACGCT
TACAAAATAAATTTTCCGCTATGGTTTATTCAATGGTGGAATAATTTTGGTCTCACAGACGACATATTGCCAACACCCATTCAAGAGTCATATTTTTATTTCACAAGAAC
AATCCAGAAAAATTCATTTCACAATTCAATGAGATTCTGTCTCTACTTTCAAATTCCATGGATATTTTGCTGGAGTTTTAACACAGCTTCTTATCCACAATACAAGATGT
TAGTCAAAAATCTCAAAATTAAATGGTGGGATAAATACAATTTCCAGCATGCCACCATTAAACATATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGATATCGAT
CAGAAAAAGAACGCAGAGTTCCTGAACGATAAATCGAAACTTCTAGCAGCACTGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTACTATCAACGGCAGTAAATGC
CTCTTCAAGCTCAAAATCAGCATCTTCCTCCATACAGGAAGATGAAAAATTGGCAAGCCCGGAATACGATCTAAATGATCTGTTTCTCGACTCACAGCCCATGTGA
Protein sequenceShow/hide protein sequence
MDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPASPLSNLESSTPPTTYSQAVAPEKRFIPRPEIKTYFQKQVAIYDPIIEPEYQSLTLDETVS
KIFPEGFNFLPEDLRKTRKFYEFILVDTKSVEIIHVPDKNDPSKIAYSKLKIFKAINPTHWNQRIFTEKSFSKPFVPQSYSYQDYIKAWFRVVWYSSRNHSWFISFCQNA
YKINFPLWFIQWWNNFGLTDDILPTPIQESYFYFTRTIQKNSFHNSMRFCLYFQIPWIFCWSFNTASYPQYKMLVKNLKIKWWDKYNFQHATIKHMKEWFAENGYLQDID
QKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVNASSSSKSASSSIQEDEKLASPEYDLNDLFLDSQPM