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PI0003912 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003912
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:11540460..11540903
RNA-Seq ExpressionPI0003912
SyntenyPI0003912
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051815.1 hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa]2.7e-2865.98Show/hide
Query:  NNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDIS
        NNQN P  Q  QEQN AY+ HDLDKPI+SYA PNLY+F+P IAY  F EN  FEIK +M+ M QNAGQF  HP EDP++H+R+FY ICASF+ML IS
Subjt:  NNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDIS

KAA0062403.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]1.1e-3263.39Show/hide
Query:  MANNNNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDI
        M N NNQ +P  QAAQ  N  Y+  D D+PIRSYA PNLY+F+P IAYP FSEN RFEIK +M+Q+IQNAGQF  HP +DPH+++R+FYSICASFHM  I
Subjt:  MANNNNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDI

Query:  SLEEFQFALFPL
        S+EE +F  F L
Subjt:  SLEEFQFALFPL

TYK02149.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]2.0e-2358.82Show/hide
Query:  MANNNNQNVPPQQAAQEQ-NAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLD
        MA+N N  VP   A Q Q N   + H+LD PIR+Y   NLY+F+  IAY VF ENA FE+KP+M+QMIQ AGQF  +  EDPHEH++SFYSICASFHM +
Subjt:  MANNNNQNVPPQQAAQEQ-NAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLD

Query:  IS
         S
Subjt:  IS

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.9e-2247.37Show/hide
Query:  QNVPPQQAAQ-EQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDISLEEF
        QN   Q+ A  + N   + HD ++P+R YA PNLYNF+P I  P F  N RFE+KP+M+QM+Q AGQF     EDPH H++SF  IC++F M  +  +  
Subjt:  QNVPPQQAAQ-EQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDISLEEF

Query:  QFALFPLTLRDEAK
        +  LFP +LRDEA+
Subjt:  QFALFPLTLRDEAK

XP_038887458.1 uncharacterized protein LOC120077591 [Benincasa hispida]1.0e-1945.9Show/hide
Query:  MANNNNQNVPPQQAAQE---QNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHM
        MA+NNN   P          Q+  ++  D + PIR+YA PNLY+FSP I+ P+  ENARFEIKP+M+QMIQN  QF     E+PH H+  F  +C++F +
Subjt:  MANNNNQNVPPQQAAQE---QNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHM

Query:  LDISLEEFQFALFPLTLRDEAK
          I+    +  LFP TLRD+AK
Subjt:  LDISLEEFQFALFPLTLRDEAK

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein5.1e-1744.12Show/hide
Query:  QNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDISLEEFQFALFPLTLRDE
        +N   + H+L+ PI  YA P+LY F+  I YP F  NARF++KP M+ MIQ   QF  + DEDP +H++S Y +C+SFH+  +S E+     F  TL+D+
Subjt:  QNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDISLEEFQFALFPLTLRDE

Query:  AK
         K
Subjt:  AK

A0A5A7UDN8 Uncharacterized protein1.3e-2865.98Show/hide
Query:  NNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDIS
        NNQN P  Q  QEQN AY+ HDLDKPI+SYA PNLY+F+P IAY  F EN  FEIK +M+ M QNAGQF  HP EDP++H+R+FY ICASF+ML IS
Subjt:  NNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDIS

A0A5A7V2U7 Putative disease resistance RPP13-like protein 15.1e-3363.39Show/hide
Query:  MANNNNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDI
        M N NNQ +P  QAAQ  N  Y+  D D+PIRSYA PNLY+F+P IAYP FSEN RFEIK +M+Q+IQNAGQF  HP +DPH+++R+FYSICASFHM  I
Subjt:  MANNNNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDI

Query:  SLEEFQFALFPL
        S+EE +F  F L
Subjt:  SLEEFQFALFPL

A0A5D3BVN1 Putative disease resistance RPP13-like protein 19.7e-2458.82Show/hide
Query:  MANNNNQNVPPQQAAQEQ-NAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLD
        MA+N N  VP   A Q Q N   + H+LD PIR+Y   NLY+F+  IAY VF ENA FE+KP+M+QMIQ AGQF  +  EDPHEH++SFYSICASFHM +
Subjt:  MANNNNQNVPPQQAAQEQ-NAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLD

Query:  IS
         S
Subjt:  IS

A0A6J1DVZ9 uncharacterized protein LOC1110249707.0e-1441.38Show/hide
Query:  NNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDISLEE
        N   V    AA   N   +V D ++ IR+YA P ++ F P IA P   E  RFE+K IM QM+Q  GQF  +P EDPH H+R F  +  SF+M ++S E 
Subjt:  NNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDISLEE

Query:  FQFALFPLTLRDEAKN
         +  LFP  L D+ ++
Subjt:  FQFALFPLTLRDEAKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATAACAACAACCAGAATGTTCCTCCCCAACAGGCTGCCCAAGAACAGAATGCCGCCTACATGGTCCACGATTTAGACAAACCAATTAGGTCGTATGCTTTGCC
AAATCTTTATAACTTCAGTCCAAGAATCGCCTATCCTGTGTTCAGCGAGAATGCACGATTCGAGATCAAACCTATTATGATACAGATGATACAGAACGCTGGACAATTTA
GCGTTCACCCTGACGAAGATCCACATGAGCATGTTCGTAGCTTCTATTCTATTTGTGCTTCCTTTCACATGCTTGACATATCGCTTGAAGAGTTCCAATTTGCCCTCTTC
CCGTTAACGCTGAGGGATGAGGCAAAAAATATGGGCAAACTTTCTAGAGGACGTGGAGGTTGGAACATGAGATCAATTGATCGAGAAGTTTATGAAGTTCTTTCCATTCC
ATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATAACAACAACCAGAATGTTCCTCCCCAACAGGCTGCCCAAGAACAGAATGCCGCCTACATGGTCCACGATTTAGACAAACCAATTAGGTCGTATGCTTTGCC
AAATCTTTATAACTTCAGTCCAAGAATCGCCTATCCTGTGTTCAGCGAGAATGCACGATTCGAGATCAAACCTATTATGATACAGATGATACAGAACGCTGGACAATTTA
GCGTTCACCCTGACGAAGATCCACATGAGCATGTTCGTAGCTTCTATTCTATTTGTGCTTCCTTTCACATGCTTGACATATCGCTTGAAGAGTTCCAATTTGCCCTCTTC
CCGTTAACGCTGAGGGATGAGGCAAAAAATATGGGCAAACTTTCTAGAGGACGTGGAGGTTGGAACATGAGATCAATTGATCGAGAAGTTTATGAAGTTCTTTCCATTCC
ATGA
Protein sequenceShow/hide protein sequence
MANNNNQNVPPQQAAQEQNAAYMVHDLDKPIRSYALPNLYNFSPRIAYPVFSENARFEIKPIMIQMIQNAGQFSVHPDEDPHEHVRSFYSICASFHMLDISLEEFQFALF
PLTLRDEAKNMGKLSRGRGGWNMRSIDREVYEVLSIP