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PI0003933 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003933
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionthionin-like protein 2
Genome locationchr01:27502063..27503185
RNA-Seq ExpressionPI0003933
SyntenyPI0003933
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461039.1 PREDICTED: thionin-like protein 2 [Cucumis melo]6.5e-5789.08Show/hide
Query:  MENILAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNP
        MENILAKKW L++WLLLTSLSTANSTSFQECYATCFVICAI PGVAFSDCPLRCLQ CI+PSFPIDD  VVHRQ+QQNHFFC+LGCAASSCTKFST QNP
Subjt:  MENILAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNP

Query:  GEKKVGRCVDSCSQTCSMD
        GE+KV RCVDSCSQTCSMD
Subjt:  GEKKVGRCVDSCSQTCSMD

XP_011659556.1 thionin-like protein 2 [Cucumis sativus]1.0e-5789.08Show/hide
Query:  MENILAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNP
        MEN+LAKKW L++WLLLTSLSTANSTSFQECYATCFVICAI PGVAFSDCPLRCLQ CI+PSFPIDDA VVHRQ+QQNHFFC+LGCAASSCTKFST QNP
Subjt:  MENILAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNP

Query:  GEKKVGRCVDSCSQTCSMD
        GE+KVGRCVDSCSQTCSM+
Subjt:  GEKKVGRCVDSCSQTCSMD

XP_022953260.1 thionin-like protein 2 [Cucurbita moschata]7.5e-4580Show/hide
Query:  KWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHV---VHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKK
        K GL++WL+L+SL+TANSTSFQECYATCFVICAI PGVAFSDCPLRCLQ CIIPSFPI +A     VHRQ Q+N FFC+LGCAASSCTKFST+QNP EKK
Subjt:  KWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHV---VHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKK

Query:  VGRCVDSCSQTCSMD
        VG CVDSCS+TCSMD
Subjt:  VGRCVDSCSQTCSMD

XP_022992447.1 thionin-like protein 2 [Cucurbita maxima]4.8e-4478.95Show/hide
Query:  KWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHV--VHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKV
        K GL++WL+L+SL+TANSTSFQECYATCF+ICAI PGVAFSDCPLRCLQ CIIPSFPI +A    VHRQ Q+N FFC+LGCAASSCTKFST +NP EKKV
Subjt:  KWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHV--VHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKV

Query:  GRCVDSCSQTCSMD
        G CVDSCS+TCSMD
Subjt:  GRCVDSCSQTCSMD

XP_038899383.1 thionin-like protein 2 [Benincasa hispida]7.2e-4882.61Show/hide
Query:  LAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKK
        +AKKW L++WLLL+SLSTANSTSFQECYATCFVICAI PGVAFSDCPLRCLQ CIIPSFPID+ + VHRQ +QN FFC+LGCA SSCTKFST QNP EK+
Subjt:  LAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKK

Query:  VGRCVDSCSQTCSMD
        VG CVDSCSQTCSMD
Subjt:  VGRCVDSCSQTCSMD

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein4.9e-5889.08Show/hide
Query:  MENILAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNP
        MEN+LAKKW L++WLLLTSLSTANSTSFQECYATCFVICAI PGVAFSDCPLRCLQ CI+PSFPIDDA VVHRQ+QQNHFFC+LGCAASSCTKFST QNP
Subjt:  MENILAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNP

Query:  GEKKVGRCVDSCSQTCSMD
        GE+KVGRCVDSCSQTCSM+
Subjt:  GEKKVGRCVDSCSQTCSMD

A0A1S3CDU4 thionin-like protein 23.2e-5789.08Show/hide
Query:  MENILAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNP
        MENILAKKW L++WLLLTSLSTANSTSFQECYATCFVICAI PGVAFSDCPLRCLQ CI+PSFPIDD  VVHRQ+QQNHFFC+LGCAASSCTKFST QNP
Subjt:  MENILAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNP

Query:  GEKKVGRCVDSCSQTCSMD
        GE+KV RCVDSCSQTCSMD
Subjt:  GEKKVGRCVDSCSQTCSMD

A0A6J1CW29 thionin-like protein 21.7e-3968.33Show/hide
Query:  KWGL---VSWLLLTS--LSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHR---QRQQNHFFCQLGCAASSCTKFSTNQN
        KWGL   + WL++ S  ++TA STSFQECYATCFVICAI PG +FS+CPL+CLQ CIIPSFPIDDA        +R  NHFFC+LGCAA+ CT F+TN N
Subjt:  KWGL---VSWLLLTS--LSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHR---QRQQNHFFCQLGCAASSCTKFSTNQN

Query:  PGEKKVGRCVDSCSQTCSMD
        P EKKVGRCVDSCS+TCSMD
Subjt:  PGEKKVGRCVDSCSQTCSMD

A0A6J1GMH5 thionin-like protein 23.6e-4580Show/hide
Query:  KWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHV---VHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKK
        K GL++WL+L+SL+TANSTSFQECYATCFVICAI PGVAFSDCPLRCLQ CIIPSFPI +A     VHRQ Q+N FFC+LGCAASSCTKFST+QNP EKK
Subjt:  KWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHV---VHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKK

Query:  VGRCVDSCSQTCSMD
        VG CVDSCS+TCSMD
Subjt:  VGRCVDSCSQTCSMD

A0A6J1JZ84 thionin-like protein 22.3e-4478.95Show/hide
Query:  KWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHV--VHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKV
        K GL++WL+L+SL+TANSTSFQECYATCF+ICAI PGVAFSDCPLRCLQ CIIPSFPI +A    VHRQ Q+N FFC+LGCAASSCTKFST +NP EKKV
Subjt:  KWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHV--VHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKV

Query:  GRCVDSCSQTCSMD
        G CVDSCS+TCSMD
Subjt:  GRCVDSCSQTCSMD

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 22.1e-1034.31Show/hide
Query:  LTSLSTANSTSFQECYATCFVIC-AIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKVGRCVDSCSQT
        L + + A    F+ECY  C V C A      +  CP  C + C+    P     V      ++ +FC+LGCA   C   S+ QNP  ++V  CVDSCS  
Subjt:  LTSLSTANSTSFQECYATCFVIC-AIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKVGRCVDSCSQT

Query:  CS
        C+
Subjt:  CS

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.1.5e-1134.31Show/hide
Query:  LTSLSTANSTSFQECYATCFVIC-AIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKVGRCVDSCSQT
        L + + A    F+ECY  C V C A      +  CP  C + C+    P     V      ++ +FC+LGCA   C   S+ QNP  ++V  CVDSCS  
Subjt:  LTSLSTANSTSFQECYATCFVIC-AIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKVGRCVDSCSQT

Query:  CS
        C+
Subjt:  CS

AT1G12672.1 unknown protein2.5e-0650Show/hide
Query:  NHFFCQLGCAASSCTKFSTNQNPGEKKVGRCVDSCSQTCS
        N ++C+LGC+   C   S+ QNP   KV  CVDSCS  CS
Subjt:  NHFFCQLGCAASSCTKFSTNQNPGEKKVGRCVDSCSQTCS

AT1G12672.2 unknown protein2.7e-0840Show/hide
Query:  CLQTCI-IPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKVGRCVDSCSQTCS
        C++TC+  PS  +D  + ++     N ++C+LGC+   C   S+ QNP   KV  CVDSCS  CS
Subjt:  CLQTCI-IPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKVGRCVDSCSQTCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATTTTGGCAAAGAAATGGGGTTTAGTGTCTTGGCTGTTGCTGACATCGCTCTCCACGGCCAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTTGT
CATATGCGCCATCATGCCCGGCGTCGCCTTCTCCGACTGCCCGTTGAGATGCCTGCAAACTTGCATCATCCCATCTTTTCCTATTGACGATGCCCATGTCGTCCATCGGC
AACGACAACAAAATCATTTCTTCTGCCAGCTTGGCTGTGCAGCTTCCTCATGTACCAAGTTTAGCACAAACCAAAATCCAGGTGAAAAAAAAGTGGGGAGGTGTGTGGAT
TCTTGCTCTCAAACATGTTCCATGGATTGA
mRNA sequenceShow/hide mRNA sequence
AAAGGCTTTAATTTCAATCCTCATCAATGGAGAACATTTTGGCAAAGAAATGGGGTTTAGTGTCTTGGCTGTTGCTGACATCGCTCTCCACGGCCAATTCCACCTCTTTT
CAAGAATGCTACGCCACCTGCTTTGTCATATGCGCCATCATGCCCGGCGTCGCCTTCTCCGACTGCCCGTTGAGATGCCTGCAAACTTGCATCATCCCATCTTTTCCTAT
TGACGATGCCCATGTCGTCCATCGGCAACGACAACAAAATCATTTCTTCTGCCAGCTTGGCTGTGCAGCTTCCTCATGTACCAAGTTTAGCACAAACCAAAATCCAGGTG
AAAAAAAAGTGGGGAGGTGTGTGGATTCTTGCTCTCAAACATGTTCCATGGATTGATGAATTGCATCTACTAAATGAAACCAATGTACTATTTTTTTTCCTTTTGGAAAA
ATAAGTGCATAGTATAAGTAATATATTGTGTTTTATTGCAAATCAAACTATATTATTGTTGCAATTTCTTTCTATACTAAATTAGAAAGAATATTGGGTTTGAAGTGTGT
TAAGAAGGAAAATCAGGTTAGCTTTATATTTTAATTTCTAAGGTTATATTTTAGGCCCTTTTTACATTTTTTTTTCTTTTGAAAATGGAGGCTATAAACAATCA
Protein sequenceShow/hide protein sequence
MENILAKKWGLVSWLLLTSLSTANSTSFQECYATCFVICAIMPGVAFSDCPLRCLQTCIIPSFPIDDAHVVHRQRQQNHFFCQLGCAASSCTKFSTNQNPGEKKVGRCVD
SCSQTCSMD