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PI0003956 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003956
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationchr09:1487716..1488692
RNA-Seq ExpressionPI0003956
SyntenyPI0003956
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042689.1 uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa]1.2e-3186.9Show/hide
Query:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVF-KGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEG
        MA QQCTKPA + HGQHQQKHDQQHDHHCFGGHVSDKIKGVF KGHHHDQA PASG V+HSANDSHCK SGSKKKKEHQ  KEG
Subjt:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVF-KGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEG

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]1.5e-5089.74Show/hide
Query:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVF-KGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSD
        MA QQCTKPA + HGQHQQKHDQQHDHHCFGGHVSDKIKGVF KGHHHDQA PASG V+HSANDSHCK SGSKKKKEHQ  KEGGLLHKIKEAFSDHSSD
Subjt:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVF-KGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSD

Query:  SSDSDNECHKPHHNKKK
        SSDS+NECHKPHHNKKK
Subjt:  SSDSDNECHKPHHNKKK

XP_022146004.1 uncharacterized protein LOC111015315 [Momordica charantia]2.1e-2365.25Show/hide
Query:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVFKGH-HHDQAPPASGVVYHSAN-DSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSS
        MAS QC+KPA  +H Q+ QKHDQ    HCF GHVSDKIKGVFKGH HH QAP A+   +HS N +++  AS S K+KE  KNK+G LLHKIK+AFSDHSS
Subjt:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVFKGH-HHDQAPPASGVVYHSAN-DSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSS

Query:  DSSDSDNECHKPHHNKKK
        DSSDSDNE HK H   KK
Subjt:  DSSDSDNECHKPHHNKKK

XP_022958513.1 glycine-rich cell wall structural protein 1-like [Cucurbita moschata]3.9e-0648Show/hide
Query:  HDHHCFGGHVSDKIKGVFKGHHH--------DQAPPASGVVYH----SANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSDSSDSDNECHKPHH
        HDH   GGH      G   GH H            PA+  V H    S N  HCKA GS +KK H KNKEGG L+KIK+AFSDH SD+SDSD++C +  H
Subjt:  HDHHCFGGHVSDKIKGVFKGHHH--------DQAPPASGVVYH----SANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSDSSDSDNECHKPHH

XP_038875375.1 uncharacterized protein LOC120067846 [Benincasa hispida]4.9e-4180.87Show/hide
Query:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVFKGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSDS
        MAS QC KPA ++    QQKHDQQH HHCFGGHVSDKIKGVFKGHHH QAP AS  V+HSAN SHCK +GSKKKKEH KNKEGGLLHKIK+AFSDHSSDS
Subjt:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVFKGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSDS

Query:  SDSDNECHKPHHNKK
        SDS+NEC KPHHNKK
Subjt:  SDSDNECHKPHHNKK

TrEMBL top hitse value%identityAlignment
A0A1S3AUH3 uncharacterized protein LOC1034828157.3e-5189.74Show/hide
Query:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVF-KGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSD
        MA QQCTKPA + HGQHQQKHDQQHDHHCFGGHVSDKIKGVF KGHHHDQA PASG V+HSANDSHCK SGSKKKKEHQ  KEGGLLHKIKEAFSDHSSD
Subjt:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVF-KGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSD

Query:  SSDSDNECHKPHHNKKK
        SSDS+NECHKPHHNKKK
Subjt:  SSDSDNECHKPHHNKKK

A0A5A7TMV4 Uncharacterized protein5.8e-3286.9Show/hide
Query:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVF-KGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEG
        MA QQCTKPA + HGQHQQKHDQQHDHHCFGGHVSDKIKGVF KGHHHDQA PASG V+HSANDSHCK SGSKKKKEHQ  KEG
Subjt:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVF-KGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEG

A0A6J1CWW2 uncharacterized protein LOC1110153151.0e-2365.25Show/hide
Query:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVFKGH-HHDQAPPASGVVYHSAN-DSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSS
        MAS QC+KPA  +H Q+ QKHDQ    HCF GHVSDKIKGVFKGH HH QAP A+   +HS N +++  AS S K+KE  KNK+G LLHKIK+AFSDHSS
Subjt:  MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVFKGH-HHDQAPPASGVVYHSAN-DSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSS

Query:  DSSDSDNECHKPHHNKKK
        DSSDSDNE HK H   KK
Subjt:  DSSDSDNECHKPHHNKKK

A0A6J1H399 glycine-rich cell wall structural protein 1-like1.9e-0648Show/hide
Query:  HDHHCFGGHVSDKIKGVFKGHHH--------DQAPPASGVVYH----SANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSDSSDSDNECHKPHH
        HDH   GGH      G   GH H            PA+  V H    S N  HCKA GS +KK H KNKEGG L+KIK+AFSDH SD+SDSD++C +  H
Subjt:  HDHHCFGGHVSDKIKGVFKGHHH--------DQAPPASGVVYH----SANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSDSSDSDNECHKPHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCCAACAATGCACCAAGCCAGCTGCTTATGAGCATGGTCAGCACCAGCAGAAGCATGACCAACAACACGATCACCATTGCTTCGGCGGCCATGTCTCCGACAA
AATCAAGGGCGTCTTCAAAGGCCACCATCACGACCAGGCTCCACCGGCATCGGGCGTGGTATACCACTCTGCCAATGACAGCCACTGCAAGGCAAGTGGGTCAAAGAAGA
AGAAGGAACACCAAAAGAATAAGGAAGGAGGTTTGTTGCATAAGATCAAGGAAGCCTTTTCTGACCATAGCAGTGATAGTAGTGACAGTGACAATGAATGTCACAAACCC
CATCACAATAAAAAGAAATGA
mRNA sequenceShow/hide mRNA sequence
CAAGTAGTTCCTTCCAATCATCTTTTAAAAGTCCCAACACAAAAAGCTTCAACTTTTATTGCATCAATGGCATCCCAACAATGCACCAAGCCAGCTGCTTATGAGCATGG
TCAGCACCAGCAGAAGCATGACCAACAACACGATCACCATTGCTTCGGCGGCCATGTCTCCGACAAAATCAAGGGCGTCTTCAAAGGCCACCATCACGACCAGGCTCCAC
CGGCATCGGGCGTGGTATACCACTCTGCCAATGACAGCCACTGCAAGGCAAGTGGGTCAAAGAAGAAGAAGGAACACCAAAAGAATAAGGAAGGAGGTTTGTTGCATAAG
ATCAAGGAAGCCTTTTCTGACCATAGCAGTGATAGTAGTGACAGTGACAATGAATGTCACAAACCCCATCACAATAAAAAGAAATGAATGGAGAGAAGGAAGGTGAATCG
ATTGAAGGAAAAGTGTGGATGCCTCTAAACTAGCTACTGCTACTATGAATTTGGTGAAGCAAAAATAAAGATACGGTGTTGGATAAAGATGATAATTTATGAGACTTTAC
TGTACCTATTTCTTCTTTGAAATAAACTTCTGTATTCCTATCCTTGTTATCGATATAAAAAGTATGTTATAAACTAGATTCTACGGATCGTTGTTAGT
Protein sequenceShow/hide protein sequence
MASQQCTKPAAYEHGQHQQKHDQQHDHHCFGGHVSDKIKGVFKGHHHDQAPPASGVVYHSANDSHCKASGSKKKKEHQKNKEGGLLHKIKEAFSDHSSDSSDSDNECHKP
HHNKKK