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PI0003960 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0003960
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr07:24142303..24142617
RNA-Seq ExpressionPI0003960
SyntenyPI0003960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064603.1 hypothetical protein E6C27_scaffold255G003250 [Cucumis melo var. makuwa]5.4e-2365.98Show/hide
Query:  MQIHSKQVLLRCPQDGSNNAIPYRPPHKRKRSLNKSK-VKFQCSDKFTRNTNERLFYAGTSSFGVSPPPSSVPLPTVVSNTSLFRSTIDGTTQNTDT
        M+IHSKQV  RCPQ+G+ NAI YRPPHK+KRSLNK + V  Q +     NTNERLFYAGTS+F VSPPPSS+PLPT V    LFRST DG+T+N+ T
Subjt:  MQIHSKQVLLRCPQDGSNNAIPYRPPHKRKRSLNKSK-VKFQCSDKFTRNTNERLFYAGTSSFGVSPPPSSVPLPTVVSNTSLFRSTIDGTTQNTDT
KGN55453.1 hypothetical protein Csa_012035 [Cucumis sativus]5.7e-2564.71Show/hide
Query:  MQIHSKQV---LLRCPQDGSNNAIPYRPPHKRKRSLNKSK-VKFQCSDKFTRNTNERLFYAGTSSFGVSPPPSSVPLPTVVSNTSLFRSTIDGTTQNTDT
        M+I+SK     +LRCPQDGS NAIP RPP+K+K+SLNK+K VKFQ +     NT ER+FYAGTS+FG+SPPPSS+PLPT V  T LFRSTIDG+TQN+ T
Subjt:  MQIHSKQV---LLRCPQDGSNNAIPYRPPHKRKRSLNKSK-VKFQCSDKFTRNTNERLFYAGTSSFGVSPPPSSVPLPTVVSNTSLFRSTIDGTTQNTDT

Query:  NV
        ++
Subjt:  NV
TrEMBL top hitse value%identityAlignment
A0A0A0L158 Uncharacterized protein2.8e-2564.71Show/hide
Query:  MQIHSKQV---LLRCPQDGSNNAIPYRPPHKRKRSLNKSK-VKFQCSDKFTRNTNERLFYAGTSSFGVSPPPSSVPLPTVVSNTSLFRSTIDGTTQNTDT
        M+I+SK     +LRCPQDGS NAIP RPP+K+K+SLNK+K VKFQ +     NT ER+FYAGTS+FG+SPPPSS+PLPT V  T LFRSTIDG+TQN+ T
Subjt:  MQIHSKQV---LLRCPQDGSNNAIPYRPPHKRKRSLNKSK-VKFQCSDKFTRNTNERLFYAGTSSFGVSPPPSSVPLPTVVSNTSLFRSTIDGTTQNTDT

Query:  NV
        ++
Subjt:  NV
A0A5D3D8T1 Uncharacterized protein2.6e-2365.98Show/hide
Query:  MQIHSKQVLLRCPQDGSNNAIPYRPPHKRKRSLNKSK-VKFQCSDKFTRNTNERLFYAGTSSFGVSPPPSSVPLPTVVSNTSLFRSTIDGTTQNTDT
        M+IHSKQV  RCPQ+G+ NAI YRPPHK+KRSLNK + V  Q +     NTNERLFYAGTS+F VSPPPSS+PLPT V    LFRST DG+T+N+ T
Subjt:  MQIHSKQVLLRCPQDGSNNAIPYRPPHKRKRSLNKSK-VKFQCSDKFTRNTNERLFYAGTSSFGVSPPPSSVPLPTVVSNTSLFRSTIDGTTQNTDT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTCACTCAAAGCAAGTTCTTCTTCGCTGTCCTCAAGATGGTTCTAACAACGCCATACCTTACAGACCTCCACACAAACGAAAACGAAGTCTAAACAAGTCCAA
GGTTAAGTTTCAATGCAGTGACAAGTTCACTCGTAATACAAACGAGCGATTATTCTACGCCGGAACCTCATCCTTCGGTGTCTCACCACCACCAAGTTCTGTACCTCTAC
CGACTGTTGTATCAAACACTAGTCTGTTCAGATCAACTATAGATGGAACTACTCAGAACACAGACACAAATGTAGAACCTTGTCCTTTGGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTCACTCAAAGCAAGTTCTTCTTCGCTGTCCTCAAGATGGTTCTAACAACGCCATACCTTACAGACCTCCACACAAACGAAAACGAAGTCTAAACAAGTCCAA
GGTTAAGTTTCAATGCAGTGACAAGTTCACTCGTAATACAAACGAGCGATTATTCTACGCCGGAACCTCATCCTTCGGTGTCTCACCACCACCAAGTTCTGTACCTCTAC
CGACTGTTGTATCAAACACTAGTCTGTTCAGATCAACTATAGATGGAACTACTCAGAACACAGACACAAATGTAGAACCTTGTCCTTTGGCGTGA
Protein sequenceShow/hide protein sequence
MQIHSKQVLLRCPQDGSNNAIPYRPPHKRKRSLNKSKVKFQCSDKFTRNTNERLFYAGTSSFGVSPPPSSVPLPTVVSNTSLFRSTIDGTTQNTDTNVEPCPLA