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PI0004009 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004009
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:21696009..21696491
RNA-Seq ExpressionPI0004009
SyntenyPI0004009
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031722.1 uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa]3.7e-3960.51Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLK--AKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVF
        MLYLVEV + +R+LE+R++  F+K + ID VTGR+    I+EL+TRVD L+      RT NYE GDSST SVAHIEE V ELDSSQKT++EM N MSE F
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLK--AKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVF

Query:  HVAFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL
             VVRNEIADV+ R+NLTM  M NQA  GGAI V+R+KI EPKPFCG + +K+L
Subjt:  HVAFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL

KAA0031850.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]9.7e-4060Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV
        MLYLVEV   +RFLE+R++   EK+D+ID V GR+  LSI+ELL RVDTL+    R  ++E GDSST SVAHIEE V ELDSSQKT++EM N MSE F  
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV

Query:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL
           VVRNEIADV+ R++LTM  M NQA  GGAI V+R+KI EPKPFCG + +K+L   +L
Subjt:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL

KAA0051251.1 uncharacterized protein E6C27_scaffold2143G00070 [Cucumis melo var. makuwa]7.4e-4060Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV
        MLYLVEV   +RFLE+R++   EK+D+ID V GR+  L I+ELL RVDTL+    RT ++E GDSST SVAHIEE V ELDSSQKT++EM N MSE F  
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV

Query:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL
           VVRNEIADV+ R++LTM  M NQA  GGAI V+R+KI EPKPFCG + +K+L   +L
Subjt:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL

TYK00114.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]1.7e-3958.71Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV
        MLYL EV +F+ FLE+R++   EK D ID V GR+  L I+ELL RVDTL+    R  NYE GDSS   VAH+EECV ELDSSQKT++EM NDMS+ F  
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV

Query:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL
           VVRNEIADV+ R+NLT+  + NQA  GGAI V+R+KI EPKPFCG + +++L
Subjt:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL

TYK23878.1 uncharacterized protein E5676_scaffold419G00550 [Cucumis melo var. makuwa]3.7e-3964.97Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV
        MLYLVEV +FV FLET  Q   EK+D ID VT RL+ L I+ELLTR+DTL+ K  RT NYE G+SST S+A IEE VGELDSSQKTI+E+ NDM E F  
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV

Query:  AFSVVRNEIADVSMRVNLTMH--TMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL
        A +VVRNEIA+VS RVNLTM   TM NQA   GAI V+RIKI EP PFCG + +K+L
Subjt:  AFSVVRNEIADVSMRVNLTMH--TMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL

TrEMBL top hitse value%identityAlignment
A0A5A7SKW3 Retrotrans_gag domain-containing protein1.8e-3960.51Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLK--AKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVF
        MLYLVEV + +R+LE+R++  F+K + ID VTGR+    I+EL+TRVD L+      RT NYE GDSST SVAHIEE V ELDSSQKT++EM N MSE F
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLK--AKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVF

Query:  HVAFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL
             VVRNEIADV+ R+NLTM  M NQA  GGAI V+R+KI EPKPFCG + +K+L
Subjt:  HVAFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL

A0A5A7SM70 Senescence-specific cysteine protease sag394.7e-4060Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV
        MLYLVEV   +RFLE+R++   EK+D+ID V GR+  LSI+ELL RVDTL+    R  ++E GDSST SVAHIEE V ELDSSQKT++EM N MSE F  
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV

Query:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL
           VVRNEIADV+ R++LTM  M NQA  GGAI V+R+KI EPKPFCG + +K+L   +L
Subjt:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL

A0A5A7UCI7 Uncharacterized protein3.6e-4060Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV
        MLYLVEV   +RFLE+R++   EK+D+ID V GR+  L I+ELL RVDTL+    RT ++E GDSST SVAHIEE V ELDSSQKT++EM N MSE F  
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV

Query:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL
           VVRNEIADV+ R++LTM  M NQA  GGAI V+R+KI EPKPFCG + +K+L   +L
Subjt:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL

A0A5D3BLG1 Senescence-specific cysteine protease sag398.0e-4058.71Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV
        MLYL EV +F+ FLE+R++   EK D ID V GR+  L I+ELL RVDTL+    R  NYE GDSS   VAH+EECV ELDSSQKT++EM NDMS+ F  
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV

Query:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL
           VVRNEIADV+ R+NLT+  + NQA  GGAI V+R+KI EPKPFCG + +++L
Subjt:  AFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL

A0A5D3DK41 Uncharacterized protein1.8e-3964.97Show/hide
Query:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV
        MLYLVEV +FV FLET  Q   EK+D ID VT RL+ L I+ELLTR+DTL+ K  RT NYE G+SST S+A IEE VGELDSSQKTI+E+ NDM E F  
Subjt:  MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHV

Query:  AFSVVRNEIADVSMRVNLTMH--TMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL
        A +VVRNEIA+VS RVNLTM   TM NQA   GAI V+RIKI EP PFCG + +K+L
Subjt:  AFSVVRNEIADVSMRVNLTMH--TMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTACCTAGTGGAAGTTCTTAACTTCGTCCGCTTCTTGGAAACACGTATTCAAATTTTTTTTGAGAAAGTCGACGTTATTGATGTGGTAACTGGACGCCTCAACGA
ATTATCCATAAAAGAACTGTTGACGAGAGTCGACACTTTAAAGGCAAAAGCTGCAAGAACTGAAAACTACGAGTGTGGGGACAGTTCAACGGACTCTGTTGCCCATATAG
AAGAGTGTGTTGGCGAGCTAGATAGCTCCCAAAAGACGATTGTGGAGATGAAAAACGACATGTCAGAAGTTTTTCATGTTGCATTCAGTGTCGTTAGGAATGAGATTGCA
GACGTGAGCATGAGGGTGAACCTCACGATGCACACCATGACAAATCAAGCTTCAGTTGGAGGAGCGATCCAAGTTAACAGAATAAAGATCCTCGAACCCAAGCCCTTCTG
TGGGGGCAAGGGATCCAAAAGCCTTGGAAAATTACATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTACCTAGTGGAAGTTCTTAACTTCGTCCGCTTCTTGGAAACACGTATTCAAATTTTTTTTGAGAAAGTCGACGTTATTGATGTGGTAACTGGACGCCTCAACGA
ATTATCCATAAAAGAACTGTTGACGAGAGTCGACACTTTAAAGGCAAAAGCTGCAAGAACTGAAAACTACGAGTGTGGGGACAGTTCAACGGACTCTGTTGCCCATATAG
AAGAGTGTGTTGGCGAGCTAGATAGCTCCCAAAAGACGATTGTGGAGATGAAAAACGACATGTCAGAAGTTTTTCATGTTGCATTCAGTGTCGTTAGGAATGAGATTGCA
GACGTGAGCATGAGGGTGAACCTCACGATGCACACCATGACAAATCAAGCTTCAGTTGGAGGAGCGATCCAAGTTAACAGAATAAAGATCCTCGAACCCAAGCCCTTCTG
TGGGGGCAAGGGATCCAAAAGCCTTGGAAAATTACATCTTTGA
Protein sequenceShow/hide protein sequence
MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIA
DVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL