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PI0004011 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004011
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr08:23373127..23373336
RNA-Seq ExpressionPI0004011
SyntenyPI0004011
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.0e-1570.15Show/hide
Query:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDVWSVEHVGFLLS
        MDTDVA  NI NIC MKHLQ  QI KSTNKNQR KR+++N+E RVD +NQL+IDDV  VEH+ FLLS
Subjt:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDVWSVEHVGFLLS

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.2e-1470.31Show/hide
Query:  ATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDVWSVEHVGFLLSFK
        A  NITNIC MKHLQ  QI KSTNKNQR KR+++N+EFRV+ DNQLKID+V  VEH+ FLLS K
Subjt:  ATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDVWSVEHVGFLLSFK

KAA0065673.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]8.3e-0465.85Show/hide
Query:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNL
        MD DV   NITNIC MKHLQ  QI KSTNKNQR KR+++++
Subjt:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNL

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.8e-1275Show/hide
Query:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDV
        MD DVA  NITNIC MKHLQ  QI KSTNKNQR KR+++N+EFRVD DNQL+IDDV
Subjt:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDV

TYK08229.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]8.3e-0465.85Show/hide
Query:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNL
        MD DV   NITNIC MKHLQ  QI KSTNKNQR KR+++++
Subjt:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNL

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein2.5e-1470.31Show/hide
Query:  ATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDVWSVEHVGFLLSFK
        A  NITNIC MKHLQ  QI KSTNKNQR KR+++N+EFRV+ DNQLKID+V  VEH+ FLLS K
Subjt:  ATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDVWSVEHVGFLLSFK

A0A5A7VBU8 GATA zinc finger domain-containing protein 10-like isoform X24.0e-0465.85Show/hide
Query:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNL
        MD DV   NITNIC MKHLQ  QI KSTNKNQR KR+++++
Subjt:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNL

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.3e-1275Show/hide
Query:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDV
        MD DVA  NITNIC MKHLQ  QI KSTNKNQR KR+++N+EFRVD DNQL+IDDV
Subjt:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDV

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.9e-1570.15Show/hide
Query:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDVWSVEHVGFLLS
        MDTDVA  NI NIC MKHLQ  QI KSTNKNQR KR+++N+E RVD +NQL+IDDV  VEH+ FLLS
Subjt:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDVWSVEHVGFLLS

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X24.0e-0465.85Show/hide
Query:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNL
        MD DV   NITNIC MKHLQ  QI KSTNKNQR KR+++++
Subjt:  MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACGGACGTGGCCACAAAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAAATCCACAAGAGTACTAACAAGAACCAGAGAATTAAGAGGAG
CCAGGACAACCTAGAGTTCAGAGTCGACGACGACAACCAGCTTAAAATCGACGACGTCTGGAGTGTGGAACACGTTGGTTTTCTTTTATCGTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACGGACGTGGCCACAAAGAACATAACGAATATCTGTACTATGAAGCACCTACAGACGTCCCAAATCCACAAGAGTACTAACAAGAACCAGAGAATTAAGAGGAG
CCAGGACAACCTAGAGTTCAGAGTCGACGACGACAACCAGCTTAAAATCGACGACGTCTGGAGTGTGGAACACGTTGGTTTTCTTTTATCGTTTAAATGA
Protein sequenceShow/hide protein sequence
MDTDVATKNITNICTMKHLQTSQIHKSTNKNQRIKRSQDNLEFRVDDDNQLKIDDVWSVEHVGFLLSFK