; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004012 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004012
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr08:8326569..8336328
RNA-Seq ExpressionPI0004012
SyntenyPI0004012
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150466.2 nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]8.6e-10482.19Show/hide
Query:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPL
        MSSEIE RN PDCDNQQITN +TNNSQP   HGCVHG  +TTA M KEEK NWAWPK LVDS PE KTST+E+HITLS   GV  TL YK RD S VLP 
Subjt:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPL

Query:  MNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR
        MNNEHYHASTSQSELL+LSMTA TSYAYHDP+ GGL+SPFG QTMHNSDYS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQR
Subjt:  MNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR

Query:  KPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS
        KPYLHESRHLHAMRRERGCGGRFLSK KKAEAS+ +DDDDGEGSNIS
Subjt:  KPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS

XP_008460780.1 PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]1.1e-10383.94Show/hide
Query:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGC-VHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLP
        MSSEIE  N PDCDNQQITN  TNNSQP     C +HGG +TTA+MSKEEK NWAWPKGLVDS P P+TS +EM ITLS   GVESTL YK RDES VLP
Subjt:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGC-VHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLP

Query:  LMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQ
        LMNNEHYHASTSQ ELLTLSMT  TSY YHDP+ GGL SPF  QTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQ
Subjt:  LMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQ

Query:  RKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSM-DDDDGEGSNIS
        RKPYLHESRHLHAMRRERGCGGRFLSKKKK EASTS+ DDDDGEGSNIS
Subjt:  RKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSM-DDDDGEGSNIS

XP_022151660.1 nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]4.8e-8670.98Show/hide
Query:  MSSEIEYRNLPDCDNQQI----TNCATNNSQPWWWHGCVHGG--TTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLL-YKRRD
        MSS  EYRN P CDN Q      N  T+NSQ WWWHG  HGG  TTTT  MSKE++ NWAWPKGLV SGP PKTS ++M  T+SPP+G ES     K RD
Subjt:  MSSEIEYRNLPDCDNQQI----TNCATNNSQPWWWHGCVHGG--TTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLL-YKRRD

Query:  ESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGL-MSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE
         S +LPLMNNEH  ASTS SEL+TL MTA TSY YHD   GG+ M PFG QT+ NS+YS++A  RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVE
Subjt:  ESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGL-MSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE

Query:  NRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS
        NRI+RSQ+KPYLHESRHLHAMRRERGCGGRF+SKKKK E+S SMDDD+  GSNIS
Subjt:  NRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS

XP_022151661.1 nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia]4.8e-8670.98Show/hide
Query:  MSSEIEYRNLPDCDNQQI----TNCATNNSQPWWWHGCVHGG--TTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLL-YKRRD
        MSS  EYRN P CDN Q      N  T+NSQ WWWHG  HGG  TTTT  MSKE++ NWAWPKGLV SGP PKTS ++M  T+SPP+G ES     K RD
Subjt:  MSSEIEYRNLPDCDNQQI----TNCATNNSQPWWWHGCVHGG--TTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLL-YKRRD

Query:  ESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGL-MSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE
         S +LPLMNNEH  ASTS SEL+TL MTA TSY YHD   GG+ M PFG QT+ NS+YS++A  RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVE
Subjt:  ESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGL-MSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE

Query:  NRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS
        NRI+RSQ+KPYLHESRHLHAMRRERGCGGRF+SKKKK E+S SMDDD+  GSNIS
Subjt:  NRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS

XP_031739714.1 nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]8.6e-10482.19Show/hide
Query:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPL
        MSSEIE RN PDCDNQQITN +TNNSQP   HGCVHG  +TTA M KEEK NWAWPK LVDS PE KTST+E+HITLS   GV  TL YK RD S VLP 
Subjt:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPL

Query:  MNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR
        MNNEHYHASTSQSELL+LSMTA TSYAYHDP+ GGL+SPFG QTMHNSDYS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQR
Subjt:  MNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR

Query:  KPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS
        KPYLHESRHLHAMRRERGCGGRFLSK KKAEAS+ +DDDDGEGSNIS
Subjt:  KPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS

TrEMBL top hitse value%identityAlignment
A0A0A0KWA0 Nuclear transcription factor Y subunit4.2e-10482.19Show/hide
Query:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPL
        MSSEIE RN PDCDNQQITN +TNNSQP   HGCVHG  +TTA M KEEK NWAWPK LVDS PE KTST+E+HITLS   GV  TL YK RD S VLP 
Subjt:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPL

Query:  MNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR
        MNNEHYHASTSQSELL+LSMTA TSYAYHDP+ GGL+SPFG QTMHNSDYS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQR
Subjt:  MNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR

Query:  KPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS
        KPYLHESRHLHAMRRERGCGGRFLSK KKAEAS+ +DDDDGEGSNIS
Subjt:  KPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS

A0A1S3CEE5 Nuclear transcription factor Y subunit5.5e-10483.94Show/hide
Query:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGC-VHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLP
        MSSEIE  N PDCDNQQITN  TNNSQP     C +HGG +TTA+MSKEEK NWAWPKGLVDS P P+TS +EM ITLS   GVESTL YK RDES VLP
Subjt:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGC-VHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLP

Query:  LMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQ
        LMNNEHYHASTSQ ELLTLSMT  TSY YHDP+ GGL SPF  QTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQ
Subjt:  LMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQ

Query:  RKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSM-DDDDGEGSNIS
        RKPYLHESRHLHAMRRERGCGGRFLSKKKK EASTS+ DDDDGEGSNIS
Subjt:  RKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSM-DDDDGEGSNIS

A0A6J1DBT5 Nuclear transcription factor Y subunit2.3e-8670.98Show/hide
Query:  MSSEIEYRNLPDCDNQQI----TNCATNNSQPWWWHGCVHGG--TTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLL-YKRRD
        MSS  EYRN P CDN Q      N  T+NSQ WWWHG  HGG  TTTT  MSKE++ NWAWPKGLV SGP PKTS ++M  T+SPP+G ES     K RD
Subjt:  MSSEIEYRNLPDCDNQQI----TNCATNNSQPWWWHGCVHGG--TTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLL-YKRRD

Query:  ESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGL-MSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE
         S +LPLMNNEH  ASTS SEL+TL MTA TSY YHD   GG+ M PFG QT+ NS+YS++A  RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVE
Subjt:  ESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGL-MSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE

Query:  NRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS
        NRI+RSQ+KPYLHESRHLHAMRRERGCGGRF+SKKKK E+S SMDDD+  GSNIS
Subjt:  NRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS

A0A6J1DFC4 Nuclear transcription factor Y subunit2.3e-8670.98Show/hide
Query:  MSSEIEYRNLPDCDNQQI----TNCATNNSQPWWWHGCVHGG--TTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLL-YKRRD
        MSS  EYRN P CDN Q      N  T+NSQ WWWHG  HGG  TTTT  MSKE++ NWAWPKGLV SGP PKTS ++M  T+SPP+G ES     K RD
Subjt:  MSSEIEYRNLPDCDNQQI----TNCATNNSQPWWWHGCVHGG--TTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLL-YKRRD

Query:  ESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGL-MSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE
         S +LPLMNNEH  ASTS SEL+TL MTA TSY YHD   GG+ M PFG QT+ NS+YS++A  RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVE
Subjt:  ESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGL-MSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE

Query:  NRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS
        NRI+RSQ+KPYLHESRHLHAMRRERGCGGRF+SKKKK E+S SMDDD+  GSNIS
Subjt:  NRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS

A0A6J1EKQ7 Nuclear transcription factor Y subunit2.0e-6659.92Show/hide
Query:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPL
        MSS+ +YR  PD            N QP WW      G  TT  +SKE+K NW WP GLVD+GP+P  ST+E+  T++PP   ES +  + +D S VLPL
Subjt:  MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPL

Query:  MNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR
        MNNEHYHAST +        T  TSY Y+D   G LM PFG QT+HNS+Y+     RM LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV N+ISRSQ+
Subjt:  MNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQR

Query:  KPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS
        KPYLHESRHLHAMRRERGC GRF+SKKK  E   SM  DDG+GSN+S
Subjt:  KPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-72.5e-2144.44Show/hide
Query:  KRRDESAVLPLMNNEHYHA---STSQSELLTLSMTAGTSYAYHDPACGGLMS-PFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQS
        ++RD     P+ +  +Y +   S   S+  T +  A   Y Y DP    + + P    T  +     + Q  + LP    EEPV+VNAKQYHGILRRRQS
Subjt:  KRRDESAVLPLMNNEHYHA---STSQSELLTLSMTAGTSYAYHDPACGGLMS-PFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQS

Query:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS
        RA+ E +N++ +S RKPYLHESRHLHA+RR RGCGGRFL+ KK+ E     D    E SN+S
Subjt:  RAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEGSNIS

Q8VY64 Nuclear transcription factor Y subunit A-41.1e-1942.01Show/hide
Query:  KRRDESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMS-------PF-GVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILR
        K R +S   P + +     S   + + +  M  G  Y Y DP    + +       P+ GVQ         M Q  + L     EEPV+VNAKQYHGILR
Subjt:  KRRDESAVLPLMNNEHYHASTSQSELLTLSMTAGTSYAYHDPACGGLMS-------PF-GVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILR

Query:  RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKK-----KAEASTSMDDDDGEGSN
        RRQSRAK E  NR  ++ +KPY+HESRHLHA+RR RGCGGRFL+ KK     K E   + D++  E S+
Subjt:  RRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKKK-----KAEASTSMDDDDGEGSN

Q93ZH2 Nuclear transcription factor Y subunit A-31.4e-1949.57Show/hide
Query:  AGTSYAYHDPACGGLMSPFGVQTMH--NSDYSRMAQARMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERG
        A  S+ Y DP  GGL++   +      N     M   R+ LP  + E +PV+VNAKQYH I+RRRQ RAK E +N++ R+ RKPYLHESRH+HA++R RG
Subjt:  AGTSYAYHDPACGGLMSPFGVQTMH--NSDYSRMAQARMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERG

Query:  CGGRFLSKKKKAEAS
         GGRFL+ KK  + S
Subjt:  CGGRFLSKKKKAEAS

Q945M9 Nuclear transcription factor Y subunit A-93.5e-2334.58Show/hide
Query:  NLPDCDNQQITNCATNNSQPWW--WHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPLMNNEHY
        N  D +     + + N+  PW      C    +    D S +         G         T  +E  +T SP    +S   Y  +++ ++        +
Subjt:  NLPDCDNQQITNCATNNSQPWW--WHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPLMNNEHY

Query:  HASTS---QSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPY
        H  T      +L+  ++   +S  Y DP   G+M  +G   +    Y  M  +RM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPY
Subjt:  HASTS---QSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPY

Query:  LHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEG
        LHESRH HAMRR RG GGRF +KK   EAS    ++   G
Subjt:  LHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEG

Q9LXV5 Nuclear transcription factor Y subunit A-16.4e-2558.26Show/hide
Query:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP  GGLM  +G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKAEASTSMDDDDGE
         + EA       D E
Subjt:  KKAEASTSMDDDDGE

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A92.5e-2434.58Show/hide
Query:  NLPDCDNQQITNCATNNSQPWW--WHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPLMNNEHY
        N  D +     + + N+  PW      C    +    D S +         G         T  +E  +T SP    +S   Y  +++ ++        +
Subjt:  NLPDCDNQQITNCATNNSQPWW--WHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPLMNNEHY

Query:  HASTS---QSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPY
        H  T      +L+  ++   +S  Y DP   G+M  +G   +    Y  M  +RM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E ++ +S RKPY
Subjt:  HASTS---QSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPY

Query:  LHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEG
        LHESRH HAMRR RG GGRF +KK   EAS    ++   G
Subjt:  LHESRHLHAMRRERGCGGRFLSKKKKAEASTSMDDDDGEG

AT5G12840.1 nuclear factor Y, subunit A14.5e-2658.26Show/hide
Query:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP  GGLM  +G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKAEASTSMDDDDGE
         + EA       D E
Subjt:  KKAEASTSMDDDDGE

AT5G12840.2 nuclear factor Y, subunit A14.5e-2658.26Show/hide
Query:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP  GGLM  +G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKAEASTSMDDDDGE
         + EA       D E
Subjt:  KKAEASTSMDDDDGE

AT5G12840.3 nuclear factor Y, subunit A14.5e-2658.26Show/hide
Query:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP  GGLM  +G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKAEASTSMDDDDGE
         + EA       D E
Subjt:  KKAEASTSMDDDDGE

AT5G12840.4 nuclear factor Y, subunit A14.5e-2658.26Show/hide
Query:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK
        Y DP  GGLM  +G Q +    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++ R  RKPYLHESRH HAMRR R  GGRF +KK
Subjt:  YHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCGGRFLSKK

Query:  KKAEASTSMDDDDGE
         + EA       D E
Subjt:  KKAEASTSMDDDDGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCTGAAATAGAATACAGAAACCTTCCAGATTGTGACAATCAGCAAATCACAAACTGCGCCACCAATAATTCTCAACCTTGGTGGTGGCACGGCTGCGTTCACGG
CGGCACTACCACCACTGCCGACATGTCAAAAGAAGAAAAAGGAAATTGGGCTTGGCCTAAGGGGTTGGTTGATAGTGGGCCTGAGCCCAAAACAAGCACTAGGGAAATGC
ATATAACTTTGTCTCCTCCTCGAGGTGTAGAATCAACACTACTATATAAGAGGAGAGATGAATCCGCTGTTCTTCCATTGATGAATAATGAACACTATCATGCCTCTACT
TCTCAATCAGAGCTTCTTACTCTTTCAATGACAGCGGGTACGTCGTATGCATACCACGACCCGGCCTGTGGAGGACTGATGTCTCCATTTGGAGTTCAAACAATGCATAA
TTCAGACTATAGTAGAATGGCACAAGCTAGAATGGCTTTGCCTTTAGCGATGGCGGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGAC
AATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAAAGAAAGCCATATCTTCACGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGA
GGGCGTTTCTTGAGCAAGAAGAAGAAGGCAGAAGCTTCGACTTCGATGGATGACGATGATGGGGAAGGCAGCAACATTAGTTAG
mRNA sequenceShow/hide mRNA sequence
CTTTGTGTTTGCCCATTTGCCACCTGTTACCTTTTTCTCTCCCAAGAAAATTTTCTTTCATTGGAAATCTAGAATTTTCTCCCATCCCAAACACTCATCTCTCTCTCTCC
TCTTAACTCTGAGTTCTCTCCCTCTATATAATTTCTTTGAGAGCTTGTGTTTGGTAATTAGATACCTGTTGGGGCTTTAGAAATTTCATTTTCTTTTTTATAATCCCAAA
TTTTCTTGGACTCCAAACACTGTTCTGTGTTGGGAAATTATTTTCACTTTCTTTTGGGATTGTTGCATTTTCTCACACCCCAAACACTGATCTTATCTTCTCTCTACTAA
AATAGTGCAAATTATGAGCTCTGAAATAGAATACAGAAACCTTCCAGATTGTGACAATCAGCAAATCACAAACTGCGCCACCAATAATTCTCAACCTTGGTGGTGGCACG
GCTGCGTTCACGGCGGCACTACCACCACTGCCGACATGTCAAAAGAAGAAAAAGGAAATTGGGCTTGGCCTAAGGGGTTGGTTGATAGTGGGCCTGAGCCCAAAACAAGC
ACTAGGGAAATGCATATAACTTTGTCTCCTCCTCGAGGTGTAGAATCAACACTACTATATAAGAGGAGAGATGAATCCGCTGTTCTTCCATTGATGAATAATGAACACTA
TCATGCCTCTACTTCTCAATCAGAGCTTCTTACTCTTTCAATGACAGCGGGTACGTCGTATGCATACCACGACCCGGCCTGTGGAGGACTGATGTCTCCATTTGGAGTTC
AAACAATGCATAATTCAGACTATAGTAGAATGGCACAAGCTAGAATGGCTTTGCCTTTAGCGATGGCGGAAGAACCCGTTTATGTGAATGCCAAGCAGTACCATGGAATT
CTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGAAAATAGAATATCCAGATCACAAAGAAAGCCATATCTTCACGAATCGAGACACCTGCACGCCATGAGAAGGGA
AAGGGGATGCGGAGGGCGTTTCTTGAGCAAGAAGAAGAAGGCAGAAGCTTCGACTTCGATGGATGACGATGATGGGGAAGGCAGCAACATTAGTTAGGCTCTGAATCAAT
GTGCAATGGCAGGAACTGTTATCAAGGGTCCCAACTACATTTATCTGCATATATATGAATGGTTAATTAGGTGTTCTGGCTTTGGGAATAACTTGTCCTCCCGTTTCTTC
CGCTACTTGGAAGATGAAAACTAAAGCAGTAGGACTAAAAAATATATATTTTGTTTTTAATCTTTTCAGTTTGAGTTTTTCTTTTCTTTTTTGTTTGAGTGACGGATATA
TGTATAATATGTTGGACTTCTTTTTATGAAATCAGATCCATCAACTCGTGGGTGTAAAGACTCGACTTTTCAAGAACTCTAACACGGAAATGTTGCTACATGCATGATAA
TTTAAATTTA
Protein sequenceShow/hide protein sequence
MSSEIEYRNLPDCDNQQITNCATNNSQPWWWHGCVHGGTTTTADMSKEEKGNWAWPKGLVDSGPEPKTSTREMHITLSPPRGVESTLLYKRRDESAVLPLMNNEHYHAST
SQSELLTLSMTAGTSYAYHDPACGGLMSPFGVQTMHNSDYSRMAQARMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRISRSQRKPYLHESRHLHAMRRERGCG
GRFLSKKKKAEASTSMDDDDGEGSNIS