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PI0004051 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004051
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:22893426..22894151
RNA-Seq ExpressionPI0004051
SyntenyPI0004051
Gene Ontology termsGO:0048507 - meristem development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.6e-6064.9Show/hide
Query:  MGALIQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHN
        +G LIQQFD DVTQEYIH Y NI RLYIT+    +G  RSNN RLRD ADD QQVLDICNNN+R+M+EIH MY +PIVPP +HRG V+VEEA+LDE YHN
Subjt:  MGALIQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHN

Query:  VEEVPHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEP
        VEE+   TQ Q+QTGY                          GVGPSSSYMDVGPSTSYMHGH H  D GEHNEYLY+EAP +VSD QEYQQEPENQEE 
Subjt:  VEEVPHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEP

Query:  GLPRVQSR
           RVQSR
Subjt:  GLPRVQSR

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.2e-5868.75Show/hide
Query:  MGALIQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHN
        +G  IQQFD DVTQEYIHWYNNI RLYITRPRAAVGHLRSNN RLRD ADDPQQVL+ICNNN+RYM+EIH MYD+ IVPPPVHRG VRVEEA+LDE YHN
Subjt:  MGALIQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHN

Query:  VEEVPHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYL
        VEEVP  TQTQSQTGY                          G+ PSS YMDVGPS  YMHGH  G   GEHN+YL
Subjt:  VEEVPHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.3e-7070.62Show/hide
Query:  IQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEV
        IQQFD+DVTQEYIHWY+NI RLYITRP AAVG  RSNN RLRD ADD QQ LDICNNNERYM+EIH MYD+PIVPPPVHRG VRVEEA+LD+ YHNVEEV
Subjt:  IQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEV

Query:  PHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPR
        P  TQTQSQTGY                          GVGPSSSY+DV PSTSYMHGH  G   GEHNEYLY+EAP DVSD QEYQQEPENQE+    R
Subjt:  PHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPR

Query:  VQSRWRQPARN
        VQSR RQP RN
Subjt:  VQSRWRQPARN

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]6.5e-5972.51Show/hide
Query:  WYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEVPHVTQTQSQTGYGV
        W++ I      R    V  LRSNN RLRD ADDPQQVLDICNNNERYM+EIH +YD+PIVPPP+HRG VRVEEA+LDE YH V+EV  +TQTQSQTGYGV
Subjt:  WYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEVPHVTQTQSQTGYGV

Query:  GPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPRVQSRWRQPARN
        GPSSSYMDV PSTSYMHGH  G +  EHNEYLY+EAP DVSD QEYQQEPENQE+    RVQSR RQPA+N
Subjt:  GPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPRVQSRWRQPARN

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.3e-7170.14Show/hide
Query:  IQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEV
        IQQFD DVTQEYIH YNNI RLYITRP A VGHLRSNN RLRD  +DPQQVLDICNNNERYM++IH +YD+PIVPPPVHR   RVEEA+LDE YHNVEEV
Subjt:  IQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEV

Query:  PHVTQTQSQTGYG--------------------------VGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPR
        P  TQTQSQTGYG                          VGP SSYMDVGPSTSYM+GHG G   GEHNEYLY+EAP DVSD QEYQQEP+NQE+    R
Subjt:  PHVTQTQSQTGYG--------------------------VGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPR

Query:  VQSRWRQPARN
        VQSR RQPARN
Subjt:  VQSRWRQPARN

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.3e-6064.9Show/hide
Query:  MGALIQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHN
        +G LIQQFD DVTQEYIH Y NI RLYIT+    +G  RSNN RLRD ADD QQVLDICNNN+R+M+EIH MY +PIVPP +HRG V+VEEA+LDE YHN
Subjt:  MGALIQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHN

Query:  VEEVPHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEP
        VEE+   TQ Q+QTGY                          GVGPSSSYMDVGPSTSYMHGH H  D GEHNEYLY+EAP +VSD QEYQQEPENQEE 
Subjt:  VEEVPHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEP

Query:  GLPRVQSR
           RVQSR
Subjt:  GLPRVQSR

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-5868.75Show/hide
Query:  MGALIQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHN
        +G  IQQFD DVTQEYIHWYNNI RLYITRPRAAVGHLRSNN RLRD ADDPQQVL+ICNNN+RYM+EIH MYD+ IVPPPVHRG VRVEEA+LDE YHN
Subjt:  MGALIQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHN

Query:  VEEVPHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYL
        VEEVP  TQTQSQTGY                          G+ PSS YMDVGPS  YMHGH  G   GEHN+YL
Subjt:  VEEVPHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.1e-7170.62Show/hide
Query:  IQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEV
        IQQFD+DVTQEYIHWY+NI RLYITRP AAVG  RSNN RLRD ADD QQ LDICNNNERYM+EIH MYD+PIVPPPVHRG VRVEEA+LD+ YHNVEEV
Subjt:  IQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEV

Query:  PHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPR
        P  TQTQSQTGY                          GVGPSSSY+DV PSTSYMHGH  G   GEHNEYLY+EAP DVSD QEYQQEPENQE+    R
Subjt:  PHVTQTQSQTGY--------------------------GVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPR

Query:  VQSRWRQPARN
        VQSR RQP RN
Subjt:  VQSRWRQPARN

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X23.1e-5972.51Show/hide
Query:  WYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEVPHVTQTQSQTGYGV
        W++ I      R    V  LRSNN RLRD ADDPQQVLDICNNNERYM+EIH +YD+PIVPPP+HRG VRVEEA+LDE YH V+EV  +TQTQSQTGYGV
Subjt:  WYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEVPHVTQTQSQTGYGV

Query:  GPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPRVQSRWRQPARN
        GPSSSYMDV PSTSYMHGH  G +  EHNEYLY+EAP DVSD QEYQQEPENQE+    RVQSR RQPA+N
Subjt:  GPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPRVQSRWRQPARN

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.1e-7170.14Show/hide
Query:  IQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEV
        IQQFD DVTQEYIH YNNI RLYITRP A VGHLRSNN RLRD  +DPQQVLDICNNNERYM++IH +YD+PIVPPPVHR   RVEEA+LDE YHNVEEV
Subjt:  IQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEV

Query:  PHVTQTQSQTGYG--------------------------VGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPR
        P  TQTQSQTGYG                          VGP SSYMDVGPSTSYM+GHG G   GEHNEYLY+EAP DVSD QEYQQEP+NQE+    R
Subjt:  PHVTQTQSQTGYG--------------------------VGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPR

Query:  VQSRWRQPARN
        VQSR RQPARN
Subjt:  VQSRWRQPARN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTTGATTCAGCAATTTGATCGGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTATGAGGCTCTACATCACTCGACCGAGAGCAGCTGTGGGTCA
TCTAAGATCAAACAACAGAAGACTTCGTGATTTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGATGAGATACATTATATGTACG
ATGTACCTATTGTACCTCCACCAGTTCACAGAGGACATGTTCGAGTTGAAGAAGCTAAACTCGATGAATTTTACCATAATGTAGAAGAAGTGCCTCATGTGACACAAACA
CAAAGCCAAACTGGTTATGGGGTCGGTCCATCCTCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGACACGGACGCGACTGCGGAGAGCATAA
CGAATATTTGTATTATGAAGCACCTATAGACGTATCAGATCTACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCCAGGGCTACCTAGAGTTCAGAGTCGATGGC
GACAACCAGCTCGAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTTTGATTCAGCAATTTGATCGGGATGTGACTCAAGAATACATCCACTGGTATAATAATATTATGAGGCTCTACATCACTCGACCGAGAGCAGCTGTGGGTCA
TCTAAGATCAAACAACAGAAGACTTCGTGATTTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGATGAGATACATTATATGTACG
ATGTACCTATTGTACCTCCACCAGTTCACAGAGGACATGTTCGAGTTGAAGAAGCTAAACTCGATGAATTTTACCATAATGTAGAAGAAGTGCCTCATGTGACACAAACA
CAAAGCCAAACTGGTTATGGGGTCGGTCCATCCTCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGACACGGACGCGACTGCGGAGAGCATAA
CGAATATTTGTATTATGAAGCACCTATAGACGTATCAGATCTACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCCAGGGCTACCTAGAGTTCAGAGTCGATGGC
GACAACCAGCTCGAAATTGA
Protein sequenceShow/hide protein sequence
MGALIQQFDRDVTQEYIHWYNNIMRLYITRPRAAVGHLRSNNRRLRDFADDPQQVLDICNNNERYMDEIHYMYDVPIVPPPVHRGHVRVEEAKLDEFYHNVEEVPHVTQT
QSQTGYGVGPSSSYMDVGPSTSYMHGHGHGRDCGEHNEYLYYEAPIDVSDLQEYQQEPENQEEPGLPRVQSRWRQPARN