; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004064 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004064
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr09:14630892..14632592
RNA-Seq ExpressionPI0004064
SyntenyPI0004064
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.0e-1583.33Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH
        MTTLLTSFVQG PLKV K GVCGLVGHPN+KCPE+IE+VN++RKYDPH
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH

KAA0056048.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.4e-1583.33Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH
        MTTLLTSFVQG PLKV K GVCGLVGHPN+KCPE+IE+VNV+R+YDPH
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH

KAA0058150.1 uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa]4.5e-1581.25Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH
        MTTLLTSFVQG PLKV K GVCGLVGHPN+KCPE+IE+VN++R+YDPH
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH

KAA0062012.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.5e-1581.25Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH
        MTTLLTSFVQG PLKV K GVCGLVGHPN+KCPE+IE+VN++R+YDPH
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH

TYK11893.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.1e-1783.67Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPHD
        MTTLLTSFVQG PLKV KYGVCGLVGHPN+KCPE+IE+VN++R+YDPHD
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPHD

TrEMBL top hitse value%identityAlignment
A0A5A7ULU1 Retrotransposon gag protein1.7e-1583.33Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH
        MTTLLTSFVQG PLKV K GVCGLVGHPN+KCPE+IE+VNV+R+YDPH
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH

A0A5A7USL5 Retrotrans_gag domain-containing protein2.2e-1581.25Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH
        MTTLLTSFVQG PLKV K GVCGLVGHPN+KCPE+IE+VN++R+YDPH
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH

A0A5A7V1C6 Retrotransposon gag protein2.2e-1581.25Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH
        MTTLLTSFVQG PLKV K GVCGLVGHPN+KCPE+IE+VN++R+YDPH
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH

A0A5D3CIZ4 Retrotransposon gag protein3.9e-1783.67Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPHD
        MTTLLTSFVQG PLKV KYGVCGLVGHPN+KCPE+IE+VN++R+YDPHD
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPHD

A0A5D3CRR8 Retrotransposon gag protein9.7e-1683.33Show/hide
Query:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH
        MTTLLTSFVQG PLKV K GVCGLVGHPN+KCPE+IE+VN++RKYDPH
Subjt:  MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTCTTCTTACTTCTTTTGTGCAAGGTGGTCCTCTCAAAGTAATCAAGTATGGAGTTTGTGGCTTGGTTGGACATCCAAATGAAAAATGTCCCGAGTTGATCGA
GAATGTGAATGTCATTCGAAAGTATGACCCCCATGATTGCATGCGAGTTGATGATGAACTTGCCGAGCTGATGATTGCGATGCATCTTGCGAGCTTGAGTGTTCTGCTGA
ATGAAGTGTGCGAGCTGGTGAATGAGTATGCGGCGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAACTCTTCTTACTTCTTTTGTGCAAGGTGGTCCTCTCAAAGTAATCAAGTATGGAGTTTGTGGCTTGGTTGGACATCCAAATGAAAAATGTCCCGAGTTGATCGA
GAATGTGAATGTCATTCGAAAGTATGACCCCCATGATTGCATGCGAGTTGATGATGAACTTGCCGAGCTGATGATTGCGATGCATCTTGCGAGCTTGAGTGTTCTGCTGA
ATGAAGTGTGCGAGCTGGTGAATGAGTATGCGGCGAGGTAA
Protein sequenceShow/hide protein sequence
MTTLLTSFVQGGPLKVIKYGVCGLVGHPNEKCPELIENVNVIRKYDPHDCMRVDDELAELMIAMHLASLSVLLNEVCELVNEYAAR