; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004079 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004079
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr06:14687343..14688163
RNA-Seq ExpressionPI0004079
SyntenyPI0004079
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-10073.28Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++ YITQPGAA+ HLRSNN RLR+V DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSD G GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        YE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARN+RRPGCGTH
Subjt:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.9e-10173.66Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYINWYKNI++ YITQPGA + HLRSNN RLR+V DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDS VGQSSD G GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        YE PAAVPEQ +E                QQQENQE ++QQRV  RRRQPARN+RRPGCGTH
Subjt:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-10073.28Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++ YITQPGAA+ HLRSNN RLR+V DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSD G GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        YE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARN+RRPGCGTH
Subjt:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.6e-9670.83Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++ YITQPGAA+ HLRSNN+RLR++ DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPV--RQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+   QTQS    VSP+MMMP FG  YYDSGVGQSSD G GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPV--RQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        LYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+N++RPGCGTH
Subjt:  LYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]8.6e-9670.83Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++ YITQPGAA+ HLRSNN+RLR++ DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPV--RQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+   QTQS    VSP+MMMP FG  YYDSGVGQSSD G GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPV--RQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        LYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+N++RPGCGTH
Subjt:  LYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X14.2e-9670.83Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++ YITQPGAA+ HLRSNN+RLR++ DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPV--RQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+   QTQS    VSP+MMMP FG  YYDSGVGQSSD G GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPV--RQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        LYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+N++RPGCGTH
Subjt:  LYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein7.3e-10173.28Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++ YITQPGAA+ HLRSNN RLR+V DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSD G GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        YE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARN+RRPGCGTH
Subjt:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.3e-10173.66Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYINWYKNI++ YITQPGA + HLRSNN RLR+V DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDS VGQSSD G GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        YE PAAVPEQ +E                QQQENQE ++QQRV  RRRQPARN+RRPGCGTH
Subjt:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein7.3e-10173.28Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++ YITQPGAA+ HLRSNN RLR+V DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYDSGVGQSSD G GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        YE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARN+RRPGCGTH
Subjt:  YEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.2e-9670.83Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++ YITQPGAA+ HLRSNN+RLR++ DDPQQVL+ICN+NE+YMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPV--RQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+   QTQS    VSP+MMMP FG  YYDSGVGQSSD G GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPV--RQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH
        LYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+N++RPGCGTH
Subjt:  LYYEPPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNQRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAAAAATATTACCAGGTT
CTATATCACTCAACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGTAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACG
AGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAA
CAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGT
CGGTCAATCGTCAGACTTGGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTATGATTTAGGGACCGATCCATCGTCTTCAT
ACATGCATGGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCACCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAG
GGACTAGAGCAACAAAGAGTGCATGGTCGACGACGGCAACCAGCAAGAAATCAGCGACGTCCAGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAAAAATATTACCAGGTT
CTATATCACTCAACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGTAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACG
AGCGGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAA
CAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTCAGGAGT
CGGTCAATCGTCAGACTTGGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTATGATTTAGGGACCGATCCATCGTCTTCAT
ACATGCATGGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACCACCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAG
GGACTAGAGCAACAAAGAGTGCATGGTCGACGACGGCAACCAGCAAGAAATCAGCGACGTCCAGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRFYITQPGAAVGHLRSNNSRLRDVVDDPQQVLDICNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVE
QQVQEVPPVRQTQSGTGDVSPMMMMPAFGTGYYDSGVGQSSDLGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPEQPDEQQQENQE
GLEQQRVHGRRRQPARNQRRPGCGTH