; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004088 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004088
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr08:1020035..1020817
RNA-Seq ExpressionPI0004088
SyntenyPI0004088
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065995.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-10976.74Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF+ILR+NQL+ANRKKC  A S+IQYLGH+IS  GVEAD +K++ M +WPQP+D+T LRGFLGLTGYYRRFVK+YG IAAPLTKLLQKN FKWD+ AT+
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AFE LK AM ++PVL LPDWSLPF++E DAS +GLGAVLSQNGHPIAFFSQKLSPRAQ+KSIYERELMAVVL+VQ+WRHY+LGRRF +ISDQKALKFL E
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLG DFEILYQ GLQNKAADALSR++     ++EL  MST G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

KAE8637370.1 hypothetical protein CSA_004463 [Cucumis sativus]4.7e-10875.58Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF++LR+N LFAN+KKC IA SKIQYLGH+IS++GV+AD EKI+ M +WPQP+DVT LRGFLGL+GYYRRFVK YG IAAPLT+LLQKN F WD+QAT 
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AFE+LK AM ++PVL LP+W LPF++E DAS TGLGAVLSQNGHPIAFFSQKLS RAQ KSIYERELMAVVL+VQ+WRHY+LGR+F +ISDQKALKFLLE
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLGYDFEILYQ GLQNKAADALSR+E      +E+++++T G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

KAE8637561.1 hypothetical protein CSA_017659 [Cucumis sativus]7.9e-10875.58Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF++LR+N LFAN+KKC IA SKIQYLGH+IS++GV+AD EKI+ M +WPQP+DVT LRGFLGL+GYYRRFVK YG IAAPLT+LLQKN F WD+QATV
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AFE+LK AM ++PVL LP+W LPF++E DAS TGLGAVLSQNGHPIAFFSQKLS RAQ KSIYERELM VVL+VQ+WRHY+LGR+F +ISDQKALKFLLE
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLGYDFEILYQ GLQNKAADALSR+E      +E+++++T G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

KAE8637598.1 hypothetical protein CSA_022681 [Cucumis sativus]7.9e-10875.58Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF+ILR+++LFANR KC IA S++QYLGHLIS+RGVEAD +KI+ M  WP+P+D+T LRGFLGLTGYYRRFVK+YG IAAPLTKLLQKN F W+++AT+
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AF+QLK AM ++PVL LPDWS PF +E DAS  GLGAVLSQ+GHPIAFFSQKLSPRAQ KSIYERELMAVVL+VQ+WRHY+LGR+F ++SDQKALKFLLE
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLGYDFEILYQ GLQNK ADALS    RK   VEL+TM+T G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

XP_031745419.1 uncharacterized protein LOC116405630 [Cucumis sativus]7.9e-10875.58Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF+ILR+++LFANR KC IA S++QYLGHLIS+RGVEAD +KI+ M  WP+P+D+T LRGFLGLTGYYRRFVK+YG IAAPLTKLLQKN F W+++AT+
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AF+QLK AM ++PVL LPDWS PF +E DAS  GLGAVLSQ+GHPIAFFSQKLSPRAQ KSIYERELMAVVL+VQ+WRHY+LGR+F ++SDQKALKFLLE
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLGYDFEILYQ GLQNK ADALS    RK   VEL+TM+T G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

TrEMBL top hitse value%identityAlignment
A0A5A7VJU2 Ty3/gypsy retrotransposon protein7.0e-11076.74Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF+ILR+NQL+ANRKKC  A S+IQYLGH+IS  GVEAD +K++ M +WPQP+D+T LRGFLGLTGYYRRFVK+YG IAAPLTKLLQKN FKWD+ AT+
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AFE LK AM ++PVL LPDWSLPF++E DAS +GLGAVLSQNGHPIAFFSQKLSPRAQ+KSIYERELMAVVL+VQ+WRHY+LGRRF +ISDQKALKFL E
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLG DFEILYQ GLQNKAADALSR++     ++EL  MST G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

A0A5D3BBH7 Ty3/gypsy retrotransposon protein1.1e-10775.19Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF+ LR+NQL+ANRKKC  A S+I YLGH+IS  GVEAD +K++ M +WP+P+DVT LRGFLGLTGYYRRFVK YG IAAPLTKLLQKN FKWD+ AT+
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AFE LK AM ++PVL LPDWSLPF++E DAS +GLGAVLSQN HPIAFFSQKLS RAQ KSIYERELMAVVL+VQ+WRHY+LGRRF ++SDQKALKFLLE
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLGYDFEILYQ GLQNKAADALSR++      +EL  +ST G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

A0A5D3CT96 Ty3/gypsy retrotransposon protein1.1e-10775.19Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF+ LR+NQL+ANRKKC  A S+I YLGH+IS  GVEAD +K++ M +WP+P+DVT LRGFLGLTGYYRRFVK YG IAAPLTKLLQKN FKWD+ AT+
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AFE LK AM ++PVL LPDWSLPF++E DAS +GLGAVLSQN HPIAFFSQKLS RAQ KSIYERELMAVVL+VQ+WRHY+LGRRF ++SDQKALKFLLE
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLGYDFEILYQ GLQNKAADALSR++      +EL  +ST G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

A0A5D3DZK6 Ty3/gypsy retrotransposon protein1.1e-10775.19Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF+ LR+NQL+ANRKKC  A S+I YLGH+IS  GVEAD +K++ M +WP+P+DVT LRGFLGLTGYYRRFVK YG IAAPLTKLLQKN FKWD+ AT+
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AFE LK AM ++PVL LPDWSLPF++E DAS +GLGAVLSQN HPIAFFSQKLS RAQ KSIYERELMAVVL+VQ+WRHY+LGRRF ++SDQKALKFLLE
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLGYDFEILYQ GLQNKAADALSR++      +EL  +ST G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

A0A5D3E325 Ty3/gypsy retrotransposon protein1.1e-10775.19Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV
        MVF+ LR+NQL+ANRKKC  A S+I YLGH+IS  GVEAD +K++ M +WP+P+DVT LRGFLGLTGYYRRFVK YG IAAPLTKLLQKN FKWD+ AT+
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE
        AFE LK AM ++PVL LPDWSLPF++E DAS +GLGAVLSQN HPIAFFSQKLS RAQ KSIYERELMAVVL+VQ+WRHY+LGRRF ++SDQKALKFLLE
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLE

Query:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL
        QREVQPQFQKWLTKLLGYDFEILYQ GLQNKAADALSR++      +EL  +ST G++
Subjt:  QREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLL

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.3e-4438.27Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWD---DQ
        +VF  L +  L     KC     +  +LGH+++  G++ + EKI+ ++++P P     ++ FLGLTGYYR+F+ N+  IA P+TK L+KN  K D    +
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWD---DQ

Query:  ATVAFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKF
           AF++LK  +   P+L +PD++  F +  DAS   LGAVLSQ+GHP+++ S+ L+      S  E+EL+A+V A + +RHY+LGR F + SD + L +
Subjt:  ATVAFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKF

Query:  LLEQREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVE
        L   ++   +  +W  KL  +DF+I Y  G +N  ADALSR++
Subjt:  LLEQREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVE

P10394 Retrovirus-related Pol polyprotein from transposon 4121.5e-3734.26Show/hide
Query:  VFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKN-GFKWDDQATV
        VF   RE  L  + +KC+  M ++ +LGH  +++G+  D +K  V++ +P P D  S R F+    YYRRF+KN+   +  +T+L +KN  F+W D+   
Subjt:  VFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKN-GFKWDDQATV

Query:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQ--NGH--PIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALK
        AF  LK  +I+  +L  PD+S  F +  DAS+   GAVL+Q  NGH  P+A+ S+  +     KS  E+EL A+  A+  +R Y+ G+ F V +D + L 
Subjt:  AFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQ--NGH--PIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALK

Query:  FLLEQREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEV
        +L        +  +   +L  Y+F + Y  G  N  ADALSR+  ++  ++
Subjt:  FLLEQREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPRKATEV

P20825 Retrovirus-related Pol polyprotein from transposon 2976.2e-4740.74Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQA--
        +VF+ L +  L     KC     +  +LGH+++  G++ +  K++ +  +P P     +R FLGLTGYYR+F+ NY  IA P+T  L+K   K D Q   
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQA--

Query:  -TVAFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKF
           AFE+LK  +I  P+L LPD+   FV+  DAS   LGAVLSQNGHPI+F S+ L+      S  E+EL+A+V A + +RHY+LGR+F++ SD + L++
Subjt:  -TVAFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKF

Query:  LLEQREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVE
        L   +E   + ++W  +L  Y F+I Y  G +N  ADALSR++
Subjt:  LLEQREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVE

P92523 Uncharacterized mitochondrial protein AtMg008607.6e-3755.38Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLG--HLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQA
        MV  I  ++Q +ANRKKC     +I YLG  H+IS  GV AD  K++ M  WP+P++ T LRGFLGLTGYYRRFVKNYG I  PLT+LL+KN  KW + A
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLG--HLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQA

Query:  TVAFEQLKKAMISVPVLTLPDWSLPFVVEI
         +AF+ LK A+ ++PVL LPD  LPFV  +
Subjt:  TVAFEQLKKAMISVPVLTLPDWSLPFVVEI

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus4.2e-3531.27Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQ------------
        +V + L +  L  N +K     +++++LG++++  G++AD +K++ + E P P  V  L+ FLG+T YYR+F+++Y  +A PLT L +            
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQ------------

Query:  KNGFKWDDQATVAFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQN----GHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGR
        K     D+ A  +F  LK  + S  +L  P ++ PF +  DAS   +GAVLSQ+      PIA+ S+ L+   +  +  E+E++A++ ++   R Y+ G 
Subjt:  KNGFKWDDQATVAFEQLKKAMISVPVLTLPDWSLPFVVEIDASRTGLGAVLSQN----GHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGR

Query:  RFI-VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPR
          I V +D + L F L  R    + ++W  ++  Y+ E++Y+ G  N  ADALSR+ P+
Subjt:  RFI-VISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQSGLQNKAADALSRVEPR

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein5.4e-3855.38Show/hide
Query:  MVFSILRENQLFANRKKCTIAMSKIQYLG--HLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQA
        MV  I  ++Q +ANRKKC     +I YLG  H+IS  GV AD  K++ M  WP+P++ T LRGFLGLTGYYRRFVKNYG I  PLT+LL+KN  KW + A
Subjt:  MVFSILRENQLFANRKKCTIAMSKIQYLG--HLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQA

Query:  TVAFEQLKKAMISVPVLTLPDWSLPFVVEI
         +AF+ LK A+ ++PVL LPD  LPFV  +
Subjt:  TVAFEQLKKAMISVPVLTLPDWSLPFVVEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTCTCAATCTTAAGGGAAAACCAACTTTTTGCCAATAGGAAGAAATGTACGATAGCTATGTCCAAAATACAGTATCTTGGCCACTTGATATCAAACAGGGGAGT
TGAGGCTGATGGAGAGAAAATCCAAGTAATGAAAGAGTGGCCCCAACCTAGAGATGTAACCAGTTTGAGGGGATTTTTGGGCCTCACGGGGTACTACAGAAGGTTTGTTA
AAAATTATGGTGTTATTGCAGCTCCTTTGACTAAGTTGCTTCAGAAGAATGGATTCAAATGGGATGACCAGGCAACTGTAGCTTTTGAACAACTAAAGAAAGCCATGATA
TCAGTTCCTGTATTAACTTTGCCAGACTGGTCATTGCCCTTTGTAGTAGAAATTGATGCTTCTAGAACAGGTTTAGGGGCTGTCCTATCCCAAAATGGCCATCCTATAGC
TTTCTTCAGTCAAAAACTATCTCCCCGAGCACAAACTAAATCTATTTACGAAAGGGAATTGATGGCAGTGGTCCTAGCCGTTCAGAGATGGAGACATTATGTTTTGGGAC
GTCGTTTCATAGTGATATCAGATCAGAAGGCATTAAAGTTCTTGCTGGAACAGAGGGAAGTCCAACCTCAATTTCAGAAGTGGCTCACCAAACTTCTAGGCTACGATTTT
GAAATCTTATACCAATCGGGCTTGCAGAATAAAGCAGCAGATGCCCTCTCAAGAGTGGAACCAAGGAAAGCTACTGAGGTTGAACTGTCTACCATGTCCACCTTGGGGTT
ACTAAGTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTCTCAATCTTAAGGGAAAACCAACTTTTTGCCAATAGGAAGAAATGTACGATAGCTATGTCCAAAATACAGTATCTTGGCCACTTGATATCAAACAGGGGAGT
TGAGGCTGATGGAGAGAAAATCCAAGTAATGAAAGAGTGGCCCCAACCTAGAGATGTAACCAGTTTGAGGGGATTTTTGGGCCTCACGGGGTACTACAGAAGGTTTGTTA
AAAATTATGGTGTTATTGCAGCTCCTTTGACTAAGTTGCTTCAGAAGAATGGATTCAAATGGGATGACCAGGCAACTGTAGCTTTTGAACAACTAAAGAAAGCCATGATA
TCAGTTCCTGTATTAACTTTGCCAGACTGGTCATTGCCCTTTGTAGTAGAAATTGATGCTTCTAGAACAGGTTTAGGGGCTGTCCTATCCCAAAATGGCCATCCTATAGC
TTTCTTCAGTCAAAAACTATCTCCCCGAGCACAAACTAAATCTATTTACGAAAGGGAATTGATGGCAGTGGTCCTAGCCGTTCAGAGATGGAGACATTATGTTTTGGGAC
GTCGTTTCATAGTGATATCAGATCAGAAGGCATTAAAGTTCTTGCTGGAACAGAGGGAAGTCCAACCTCAATTTCAGAAGTGGCTCACCAAACTTCTAGGCTACGATTTT
GAAATCTTATACCAATCGGGCTTGCAGAATAAAGCAGCAGATGCCCTCTCAAGAGTGGAACCAAGGAAAGCTACTGAGGTTGAACTGTCTACCATGTCCACCTTGGGGTT
ACTAAGTACTTAA
Protein sequenceShow/hide protein sequence
MVFSILRENQLFANRKKCTIAMSKIQYLGHLISNRGVEADGEKIQVMKEWPQPRDVTSLRGFLGLTGYYRRFVKNYGVIAAPLTKLLQKNGFKWDDQATVAFEQLKKAMI
SVPVLTLPDWSLPFVVEIDASRTGLGAVLSQNGHPIAFFSQKLSPRAQTKSIYERELMAVVLAVQRWRHYVLGRRFIVISDQKALKFLLEQREVQPQFQKWLTKLLGYDF
EILYQSGLQNKAADALSRVEPRKATEVELSTMSTLGLLST