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PI0004093 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004093
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:18644397..18644564
RNA-Seq ExpressionPI0004093
SyntenyPI0004093
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036810.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]9.5e-1170.91Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        MSP++I+GTQPG  SE +T+S+  KRKRGGQA+EMAEII NA EYANDQLK I E
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
KAA0060365.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-0967.27Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        M PDDI+GT+P R SEDRT SS SKRK+GGQ +E  EII +AMEY N QLK I E
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
KAA0060529.1 retrotransposon protein [Cucumis melo var. makuwa]4.4e-0863.64Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        M  DDI+GT+P R +E RT SS SKRK+GGQA+E  EII N ME++ND+LK IVE
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
KAA0061292.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]1.7e-0765.45Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        MSPDD +GT  GR SE R  S  SKRK+G Q +E  +IICNAMEYANDQLK I E
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
KAA0061395.1 retrotransposon protein [Cucumis melo var. makuwa]6.8e-0960Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        MSP+DI+GT+P R S DR  SS+ KRKRGGQ++E+A++IC+ MEY NDQL   V+
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
TrEMBL top hitse value%identityAlignment
A0A5A7T0C2 RING-H2 finger protein ATL664.6e-1170.91Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        MSP++I+GTQPG  SE +T+S+  KRKRGGQA+EMAEII NA EYANDQLK I E
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
A0A5A7UZF5 RING-H2 finger protein ATL668.1e-0865.45Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        MSPDD +GT  GR SE R  S  SKRK+G Q +E  +IICNAMEYANDQLK I E
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
A0A5A7V3C0 Retrotransposon protein1.1e-0967.27Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        M PDDI+GT+P R SEDRT SS SKRK+GGQ +E  EII +AMEY N QLK I E
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
A0A5A7V469 Retrotransposon protein2.1e-0863.64Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        M  DDI+GT+P R +E RT SS SKRK+GGQA+E  EII N ME++ND+LK IVE
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
A0A5D3CX17 Retrotransposon protein3.3e-0960Show/hide
Query:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
        MSP+DI+GT+P R S DR  SS+ KRKRGGQ++E+A++IC+ MEY NDQL   V+
Subjt:  MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCTGACGACATAATAGGCACACAACCCGGTCGGTTGTCTGAGGATAGGACTACTTCAAGCGATTCGAAGAGGAAACGGGGAGGGCAGGCATTAGAGATGGCGGA
AATTATTTGCAATGCCATGGAATATGCGAATGACCAGCTGAAGGTCATTGTAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCTGACGACATAATAGGCACACAACCCGGTCGGTTGTCTGAGGATAGGACTACTTCAAGCGATTCGAAGAGGAAACGGGGAGGGCAGGCATTAGAGATGGCGGA
AATTATTTGCAATGCCATGGAATATGCGAATGACCAGCTGAAGGTCATTGTAGAATGA
Protein sequenceShow/hide protein sequence
MSPDDIIGTQPGRLSEDRTTSSDSKRKRGGQALEMAEIICNAMEYANDQLKVIVE