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PI0004116 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004116
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:23394856..23395355
RNA-Seq ExpressionPI0004116
SyntenyPI0004116
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025968.1 hypothetical protein E6C27_scaffold34G002830 [Cucumis melo var. makuwa]1.3e-1751.79Show/hide
Query:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNM----KVNVNPPSRGDTFPKEPLEKVIPRHAPLK--------
        L+ HL+ L EL +DESLTG H VDS +E +GTS++P+ KP  Q LRPSALLE+IRR  M    K+  +PPS+GD  P+EPL+KV   HAPLK        
Subjt:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNM----KVNVNPPSRGDTFPKEPLEKVIPRHAPLK--------

Query:  --KPMTEHPEPS
          K +T +PE S
Subjt:  --KPMTEHPEPS

KAA0031667.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.9e-1751.79Show/hide
Query:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNM----KVNVNPPSRGDTFPKEPLEKVIPRHAPLK--------
        L+ HL+ L EL +DESL G H VDST+E VGTS++P+ KP  Q LRPSAL E+IRR  M    K   +PPS+GD  PKEPL+KV   HA LK        
Subjt:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNM----KVNVNPPSRGDTFPKEPLEKVIPRHAPLK--------

Query:  --KPMTEHPEPS
          + +T +PEPS
Subjt:  --KPMTEHPEPS

KAA0037262.1 hypothetical protein E6C27_scaffold379G001910 [Cucumis melo var. makuwa]6.6e-1753.85Show/hide
Query:  LSLDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLKKPMTEH
        L L+ HL+ L EL +DESLTG H VDST+E VGTS++PI KP  Q LRPSALLE+IRR  M V      +PPS+GD +PKEP +K+           T  
Subjt:  LSLDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLKKPMTEH

Query:  PEPS
        PEPS
Subjt:  PEPS

KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]6.6e-1751.3Show/hide
Query:  GLSLDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLK-----
        G  L+ HL+ L EL +DESLTG H VDST+E V TS++P+ KP  Q LRPS LLE+IRR  M V      NPPS+GD  P+E L+KV   HAPLK     
Subjt:  GLSLDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLK-----

Query:  -----KPMTEHPEPS
             + +T  PEPS
Subjt:  -----KPMTEHPEPS

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]1.7e-1750.89Show/hide
Query:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLK--------
        L+ H++ L EL SDESLTG H VDS +E +GTS++P+ KP  Q LRP ALL +I R NM V      +PPS+GD +PKEPL+KV   HAPLK        
Subjt:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLK--------

Query:  --KPMTEHPEPS
          + +T  PEPS
Subjt:  --KPMTEHPEPS

TrEMBL top hitse value%identityAlignment
A0A5A7SIG6 PMD domain-containing protein6.5e-1851.79Show/hide
Query:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNM----KVNVNPPSRGDTFPKEPLEKVIPRHAPLK--------
        L+ HL+ L EL +DESLTG H VDS +E +GTS++P+ KP  Q LRPSALLE+IRR  M    K+  +PPS+GD  P+EPL+KV   HAPLK        
Subjt:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNM----KVNVNPPSRGDTFPKEPLEKVIPRHAPLK--------

Query:  --KPMTEHPEPS
          K +T +PE S
Subjt:  --KPMTEHPEPS

A0A5A7V3X5 PMD domain-containing protein8.5e-1850.89Show/hide
Query:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLK--------
        L+ H++ L EL SDESLTG H VDS +E +GTS++P+ KP  Q LRP ALL +I R NM V      +PPS+GD +PKEPL+KV   HAPLK        
Subjt:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLK--------

Query:  --KPMTEHPEPS
          + +T  PEPS
Subjt:  --KPMTEHPEPS

A0A5D3BZM5 Putative mitochondrial protein1.9e-1751.79Show/hide
Query:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNM----KVNVNPPSRGDTFPKEPLEKVIPRHAPLK--------
        L+ HL+ L EL +DESL G H VDST+E VGTS++P+ KP  Q LRPSAL E+IRR  M    K   +PPS+GD  PKEPL+KV   HA LK        
Subjt:  LDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNM----KVNVNPPSRGDTFPKEPLEKVIPRHAPLK--------

Query:  --KPMTEHPEPS
          + +T +PEPS
Subjt:  --KPMTEHPEPS

A0A5D3C6L1 Uncharacterized protein3.2e-1753.85Show/hide
Query:  LSLDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLKKPMTEH
        L L+ HL+ L EL +DESLTG H VDST+E VGTS++PI KP  Q LRPSALLE+IRR  M V      +PPS+GD +PKEP +K+           T  
Subjt:  LSLDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLKKPMTEH

Query:  PEPS
        PEPS
Subjt:  PEPS

A0A5D3D2A0 PMD domain-containing protein3.2e-1751.3Show/hide
Query:  GLSLDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLK-----
        G  L+ HL+ L EL +DESLTG H VDST+E V TS++P+ KP  Q LRPS LLE+IRR  M V      NPPS+GD  P+E L+KV   HAPLK     
Subjt:  GLSLDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVN----VNPPSRGDTFPKEPLEKVIPRHAPLK-----

Query:  -----KPMTEHPEPS
             + +T  PEPS
Subjt:  -----KPMTEHPEPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTGATAGTAGTAGTAGCGATCATCACTGGAGAGGCCTTCAAAGAAAGCAAGGGATTGTCTTTGGACGATCATCTTCAAAGGCTTTCAGAGTTATGTAGTGATGA
ATCCTTGACAGGGTCTCATGGTGTAGATTCGACCCTTGAAGAGGTCGGTACCTCAAGATCACCAATAGTCAAACCACCTAATCAATTCTTACGACCCTCTGCTCTCCTCG
AGAAGATTCGACGTGACAATATGAAAGTGAATGTGAATCCTCCATCTAGAGGAGATACCTTTCCCAAAGAGCCTTTAGAGAAAGTCATACCCAGACATGCCCCTCTCAAG
AAGCCGATGACAGAACACCCTGAGCCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTGATAGTAGTAGTAGCGATCATCACTGGAGAGGCCTTCAAAGAAAGCAAGGGATTGTCTTTGGACGATCATCTTCAAAGGCTTTCAGAGTTATGTAGTGATGA
ATCCTTGACAGGGTCTCATGGTGTAGATTCGACCCTTGAAGAGGTCGGTACCTCAAGATCACCAATAGTCAAACCACCTAATCAATTCTTACGACCCTCTGCTCTCCTCG
AGAAGATTCGACGTGACAATATGAAAGTGAATGTGAATCCTCCATCTAGAGGAGATACCTTTCCCAAAGAGCCTTTAGAGAAAGTCATACCCAGACATGCCCCTCTCAAG
AAGCCGATGACAGAACACCCTGAGCCTTCTTAA
Protein sequenceShow/hide protein sequence
MRVIVVVAIITGEAFKESKGLSLDDHLQRLSELCSDESLTGSHGVDSTLEEVGTSRSPIVKPPNQFLRPSALLEKIRRDNMKVNVNPPSRGDTFPKEPLEKVIPRHAPLK
KPMTEHPEPS