; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004129 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004129
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:1959244..1959688
RNA-Seq ExpressionPI0004129
SyntenyPI0004129
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031751.1 hypothetical protein E6C27_scaffold506G00140 [Cucumis melo var. makuwa]4.6e-3167.86Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        MAP  + EVKEH++ SDS++SDRHWKRPLKKAK S D   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTS+TPV + TE
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLEEI
Subjt:  QPLRPPTLLEEI

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]3.9e-3066.96Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        MAP  + EVKE ++ SDS++SDRHWKRPLKKAK S D   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTS+TPV + TE
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLEEI
Subjt:  QPLRPPTLLEEI

KAA0047546.1 hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa]5.1e-3066.96Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        MA   + EVKEH++ SDS++SDRHWKRPLKKAK S D   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTSKTPV +  E
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLEEI
Subjt:  QPLRPPTLLEEI

KAA0048379.1 hypothetical protein E6C27_scaffold264G00980 [Cucumis melo var. makuwa]6.6e-3066.96Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        M P  + EVKEH++ SDS++SDRHWKR LKKAK SSD   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTSKTPV + TE
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLE+I
Subjt:  QPLRPPTLLEEI

TYK06278.1 hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]5.1e-3066.96Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        MA   + EVKEH++ SDS++SDRHWKRPLKKAK S D   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTSKTPV +  E
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLEEI
Subjt:  QPLRPPTLLEEI

TrEMBL top hitse value%identityAlignment
A0A5A7SQC9 PMD domain-containing protein2.2e-3167.86Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        MAP  + EVKEH++ SDS++SDRHWKRPLKKAK S D   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTS+TPV + TE
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLEEI
Subjt:  QPLRPPTLLEEI

A0A5A7TX42 Uncharacterized protein1.9e-3066.96Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        MAP  + EVKE ++ SDS++SDRHWKRPLKKAK S D   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTS+TPV + TE
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLEEI
Subjt:  QPLRPPTLLEEI

A0A5A7TZZ9 PMD domain-containing protein2.5e-3066.96Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        MA   + EVKEH++ SDS++SDRHWKRPLKKAK S D   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTSKTPV +  E
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLEEI
Subjt:  QPLRPPTLLEEI

A0A5A7U4K9 Uncharacterized protein3.2e-3066.96Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        M P  + EVKEH++ SDS++SDRHWKR LKKAK SSD   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTSKTPV + TE
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLE+I
Subjt:  QPLRPPTLLEEI

A0A5D3C543 PMD domain-containing protein2.5e-3066.96Show/hide
Query:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE
        MA   + EVKEH++ SDS++SDRHWKRPLKKAK S D   GRG  A+E+P+VP PLSPL+ +L+GLIE  SD+SLTGPHAVDSA E VGTSKTPV +  E
Subjt:  MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTE

Query:  QPLRPPTLLEEI
        Q LRP  LLEEI
Subjt:  QPLRPPTLLEEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTACCCACGATAGAGAGGTCAAGGAACATAGAGAGCATAGCGATAGCAACAGAAGCGACCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGGCATCAAGCGA
TGATTCATGTGGAAGAGGTTCAATTGCTATGGAAATTCCTAACGTTCCAACACCATTGTCACCTTTGGACGGTTATCTTCAAGGACTTATAGAGATATGTAGTGATGACT
CTCTAACAGGGCCCCATGCCGTGGATTCGGCCCTTGAAGGAGTTGGTACTTCAAAGACACCAGTTGCCAGACTGACTGAACAACCCTTACGTCCTCCTACTCTTCTCGAG
GAGATTGTCGGAGCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTACCCACGATAGAGAGGTCAAGGAACATAGAGAGCATAGCGATAGCAACAGAAGCGACCGTCATTGGAAGAGACCTTTGAAGAAAGCAAAGGCATCAAGCGA
TGATTCATGTGGAAGAGGTTCAATTGCTATGGAAATTCCTAACGTTCCAACACCATTGTCACCTTTGGACGGTTATCTTCAAGGACTTATAGAGATATGTAGTGATGACT
CTCTAACAGGGCCCCATGCCGTGGATTCGGCCCTTGAAGGAGTTGGTACTTCAAAGACACCAGTTGCCAGACTGACTGAACAACCCTTACGTCCTCCTACTCTTCTCGAG
GAGATTGTCGGAGCAAGATGA
Protein sequenceShow/hide protein sequence
MAPTHDREVKEHREHSDSNRSDRHWKRPLKKAKASSDDSCGRGSIAMEIPNVPTPLSPLDGYLQGLIEICSDDSLTGPHAVDSALEGVGTSKTPVARLTEQPLRPPTLLE
EIVGAR