; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004146 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004146
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease
Genome locationchr07:2678848..2682597
RNA-Seq ExpressionPI0004146
SyntenyPI0004146
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0032299 - ribonuclease H2 complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001352 - Ribonuclease HII/HIII
IPR004649 - Ribonuclease H2, subunit A
IPR012337 - Ribonuclease H-like superfamily
IPR023160 - Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR024567 - Ribonuclease HII/HIII domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582048.1 Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]2.7e-16095.29Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIESNAKGRCKFFQ RKLEQL++F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

XP_004152096.1 ribonuclease H2 subunit A [Cucumis sativus]1.2e-16397.98Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDSLPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLK+LSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIES+ KGRCKFFQ RKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

XP_008453982.1 PREDICTED: ribonuclease H2 subunit A isoform X1 [Cucumis melo]5.2e-16498.65Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIESNAKGRCKFFQ RKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

XP_022979887.1 ribonuclease H2 subunit A [Cucurbita maxima]7.8e-16094.95Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIESNAKGRCKFFQ RKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

XP_023527419.1 ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]1.2e-16095.62Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIESNAKGRCKFFQ RKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

TrEMBL top hitse value%identityAlignment
A0A0A0KTZ4 Ribonuclease5.6e-16497.98Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQDSLPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLK+LSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIES+ KGRCKFFQ RKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

A0A1S3BXP1 Ribonuclease2.5e-16498.65Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIESNAKGRCKFFQ RKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

A0A5A7TT92 Ribonuclease2.5e-16498.65Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MS QDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIESNAKGRCKFFQ RKLEQLSRF
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

A0A6J1GTR5 Ribonuclease6.5e-16094.95Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIESNAKGRCKFFQ RKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

A0A6J1IPY0 Ribonuclease3.8e-16094.95Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        MSSQD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYLKELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVL MGVLLTEVYVDTVGDPEKYRIKLSEKFPN+KFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
        TTKCWLEDHKHSVFGFP+LVRFSWGTCTSYFKD+VEVSWESDKVDEDGATGGSGKKQLRLSNVGI TSKRKSEEIESNAKGRCKFFQ RKLEQL+ F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

SwissProt top hitse value%identityAlignment
O75792 Ribonuclease H2 subunit A1.5e-6546.26Show/hide
Query:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVT
        +PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  ADSKTL E +RE LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+ 
Subjt:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVT

Query:  KVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHS
          L  GV +T+V+VDTVG PE Y+ +L + FP I+  V  KAD+LYPVVS ASI AKV RD+A+++W   E  +++  ++GSGYP DP TK WL++H   
Subjt:  KVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHS

Query:  VFGFPTLVRFSWGTC-TSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLE
        VFGFP  VRFSW T  T   K+  +V WE         +    ++ LR      ITS   +E  ++  +   ++F  R LE
Subjt:  VFGFPTLVRFSWGTC-TSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLE

Q2TBT5 Ribonuclease H2 subunit A3.4e-6550.4Show/hide
Query:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDS
        P    +PCV+G+DEAGRGPVLGPMVY   YC  S L++L +L  ADSKTL E +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SHD+
Subjt:  PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDS

Query:  AMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWL
        A GLV   L  GV + +V+VDTVG PE Y+ +L ++FP I+  V  KAD+LYPVVS ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK WL
Subjt:  AMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWL

Query:  EDHKHSVFGFPTLVRFSWGTCTSYFKDVVE-VSWESDKVDEDGATGGSGK
          H   VFGFP  VRFSW T  S  +   E V WE     E G   G GK
Subjt:  EDHKHSVFGFPTLVRFSWGTCTSYFKDVVE-VSWESDKVDEDGATGGSGK

Q5U209 Ribonuclease H2 subunit A1.8e-6650.21Show/hide
Query:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLV
        +PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +SHD+A GL+
Subjt:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLV

Query:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH
           +   V +T+V+VDTVG PE Y+ +L ++FP I+  V  KADSL+PVVS ASI+AKV RD+A++ W   E+ + +  ++GSGYP DP TK WL  H  
Subjt:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH

Query:  SVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDED
         VFGFP  VRFSW T  +   K+   V+WE    +ED
Subjt:  SVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDED

Q9CWY8 Ribonuclease H2 subunit A2.0e-6545.96Show/hide
Query:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLV
        +PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+
Subjt:  KPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLV

Query:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH
           L   V +T+V+VDTVG PE Y+ +L + FP I+  V  KADSL+PVVS ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK WL  H  
Subjt:  TKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKH

Query:  SVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLS
         VFGFP  VRFSW T  +   K+  +V WE  + +ED    G             ITS           +   ++FQ R LE  S
Subjt:  SVFGFPTLVRFSWGTCTSYF-KDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLS

Q9SEZ6 Ribonuclease H2 subunit A1.6e-12371.38Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
         TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF Q RK++QL++F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

Arabidopsis top hitse value%identityAlignment
AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-12471.38Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLN
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
         TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF Q RK++QL++F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF

AT2G25100.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.3e-11467Show/hide
Query:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E LK ++S+GWAVDVIDPRELS+KML        
Subjt:  MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLN

Query:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
                    KVL MGVLLTE Y+DTVGDP+KYRIKLSE+FP+IKFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF
         TK WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G  G S K+Q +LS+ G  T +++SEEIES+ KGRCKF Q RK++QL++F
Subjt:  TTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGCAAGATTCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGTCCAATGGTGTATGGATGTTTGTA
CTGCGCCAGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAATGAGT
CAATTGGATGGGCTGTTGATGTCATTGATCCTCGAGAACTTTCTTCCAAGATGCTAAATAAAGTAAAGATCAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTG
GTCACCAAGGTTCTAAGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGGATCAAGTTGTCTGAAAAATTTCCCAATATAAA
ATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAA
CAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCTACACTAGTC
CGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACGTTGTTGAAGTATCATGGGAGTCGGATAAAGTGGATGAAGATGGTGCAACGGGTGGAAGTGGTAAGAAACA
ATTAAGATTAAGCAATGTTGGTATCATCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAACGCCAAAGGACGGTGCAAGTTTTTCCAGACTAGAAAACTTGAACAAC
TCTCTCGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATAAGTAACATAGATAAAGGTTAGGGTCCAAAGACTATAACCTAGATGAAGTCAATTGGGTTGACGGAAAGTAATGTAGCGTCAACTACGTCAACAAAAGATGTGATTAT
TCAATTGCGCCTCTAAAAAATGTGATTATTCGAATCCGAGTATCTACGTGTGAGAAAGAAAAAAGAAAGTCACTTGTTGTGAGAGCTTAATTTTATTTGGGTTATGTGTG
TATATATTTATATATGATGAATCAAAACCAGAGCAGCTTCCATGGCGGGACCTAAAAAAGAGAACACTCAATCGAAGAAAGTAAAGGGAGGAAGAGATTAGCTGACAAAC
TGAATTATCGAAGTACAAATCAGCAATGTCTTCGCAAGATTCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCTGTTTTAG
GTCCAATGGTGTATGGATGTTTGTACTGCGCCAGTTCCTATTTGAAAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAAAGAAGAGAAGAGGGAGGAATTG
TTTGAAGATTTGAAGGCTAATGAGTCAATTGGATGGGCTGTTGATGTCATTGATCCTCGAGAACTTTCTTCCAAGATGCTAAATAAAGTAAAGATCAACCTAAATGAAAT
ATCACATGACTCTGCAATGGGTCTGGTCACCAAGGTTCTAAGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATCCTGAAAAGTACAGGATCAAGT
TGTCTGAAAAATTTCCCAATATAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCA
TTGCGGGAATGGGCATTGGAGGAAACAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTC
GGTATTTGGGTTCCCTACACTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACGTTGTTGAAGTATCATGGGAGTCGGATAAAGTGGATGAAGATGGTG
CAACGGGTGGAAGTGGTAAGAAACAATTAAGATTAAGCAATGTTGGTATCATCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAACGCCAAAGGACGGTGCAAGTTT
TTCCAGACTAGAAAACTTGAACAACTCTCTCGTTTTTGAATGTTTGATTACATTCTCCAATTGTTAAAGATTAACTAAGTAGCTAATAACCAATAGTTTGGCTGTGTACC
AATTGGTTATTGTGCTTAGAAAACTCCTTTTTAATGATATGTAACAGTTACTTTGTAATAGCTTAAAAGTACTTTGAAGTGCTGTTAAATATTTCTTCCAACATTTTTCC
CACTTTTTAAATAGGTCTTAATTTGAACATTTGGAGAAGTGGTTTTAGGTCTAAAATCACTTCTCACTCTTTTGAAA
Protein sequenceShow/hide protein sequence
MSSQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGL
VTKVLSMGVLLTEVYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLV
RFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGIITSKRKSEEIESNAKGRCKFFQTRKLEQLSRF