; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0004152 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004152
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionpolyubiquitin-like
Genome locationchr06:25768978..25769764
RNA-Seq ExpressionPI0004152
SyntenyPI0004152
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025486.1 polyubiquitin-like [Cucumis melo var. makuwa]1.5e-1538.19Show/hide
Query:  SNDDISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKI
        +N D+SI  +       I+AV+ALPD+ EDL+ +AFDFL +    AK+F++++  LR KWL +KL  +P  +IFV  ++G  +SL V T  TI+++K K+
Subjt:  SNDDISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKI

Query:  EAKEGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC
          K+GY   +  L++ G  L+D R+L    +  G ++H +L +C
Subjt:  EAKEGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC

XP_008463442.1 PREDICTED: polyubiquitin-like [Cucumis melo]1.8e-7295.24Show/hide
Query:  MGSNDDISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKA
        M SNDDISISNS+NSIETVIKAVEALPDMDEDLILDAFDFLMDNE KAKVF+SMDAKLRRKWLIKKLRPQP+MQIFVKTLEGRKMSLDVLTTDTINDVKA
Subjt:  MGSNDDISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKA

Query:  KIEAKEGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVCD
        KIEAKEGYP+QQQRLVFNGWKLDDDRTLGSCGLWSGSSLH+ILCVCD
Subjt:  KIEAKEGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVCD

XP_022154969.1 ubiquitin-like [Momordica charantia]4.0e-2449.24Show/hide
Query:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR
        SI  VIKAV+ALPDMDED ILDA DFL  N    ++F+++  KLR++WL++ L    QM+I  +T+ G++  L+VL +DT+  VKAKIE KEGYP ++QR
Subjt:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR

Query:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC
        L + G +L+   TL  C +  GS L +IL  C
Subjt:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC

XP_022154970.1 ubiquitin-like isoform X1 [Momordica charantia]2.1e-2853.03Show/hide
Query:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR
        SI  VIKAV+ALPDMDEDLILDA DF   N    ++F+++D KLR++WL++ L    QMQI VK L G+ +  ++L ++TI+ VKAKIEA EGYP  QQR
Subjt:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR

Query:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC
        L++ G +L+D RTL    + SGS+LHM+  +C
Subjt:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC

XP_022154972.1 ubiquitin-like isoform X2 [Momordica charantia]9.6e-2651.52Show/hide
Query:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR
        SI  VIKAV+ALPDMDEDLILDA DF   N    ++F+++D KLR++WL++ L      QI VK L G+ +  ++L ++TI+ VKAKIEA EGYP  QQR
Subjt:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR

Query:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC
        L++ G +L+D RTL    + SGS+LHM+  +C
Subjt:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC

TrEMBL top hitse value%identityAlignment
A0A1S3CKU5 polyubiquitin-like8.6e-7395.24Show/hide
Query:  MGSNDDISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKA
        M SNDDISISNS+NSIETVIKAVEALPDMDEDLILDAFDFLMDNE KAKVF+SMDAKLRRKWLIKKLRPQP+MQIFVKTLEGRKMSLDVLTTDTINDVKA
Subjt:  MGSNDDISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKA

Query:  KIEAKEGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVCD
        KIEAKEGYP+QQQRLVFNGWKLDDDRTLGSCGLWSGSSLH+ILCVCD
Subjt:  KIEAKEGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVCD

A0A5D3BMH5 Polyubiquitin-like8.6e-7395.24Show/hide
Query:  MGSNDDISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKA
        M SNDDISISNS+NSIETVIKAVEALPDMDEDLILDAFDFLMDNE KAKVF+SMDAKLRRKWLIKKLRPQP+MQIFVKTLEGRKMSLDVLTTDTINDVKA
Subjt:  MGSNDDISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKA

Query:  KIEAKEGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVCD
        KIEAKEGYP+QQQRLVFNGWKLDDDRTLGSCGLWSGSSLH+ILCVCD
Subjt:  KIEAKEGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVCD

A0A6J1DL46 ubiquitin-like isoform X11.0e-2853.03Show/hide
Query:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR
        SI  VIKAV+ALPDMDEDLILDA DF   N    ++F+++D KLR++WL++ L    QMQI VK L G+ +  ++L ++TI+ VKAKIEA EGYP  QQR
Subjt:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR

Query:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC
        L++ G +L+D RTL    + SGS+LHM+  +C
Subjt:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC

A0A6J1DN50 ubiquitin-like isoform X24.6e-2651.52Show/hide
Query:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR
        SI  VIKAV+ALPDMDEDLILDA DF   N    ++F+++D KLR++WL++ L      QI VK L G+ +  ++L ++TI+ VKAKIEA EGYP  QQR
Subjt:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR

Query:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC
        L++ G +L+D RTL    + SGS+LHM+  +C
Subjt:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC

A0A6J1DNT8 ubiquitin-like1.9e-2449.24Show/hide
Query:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR
        SI  VIKAV+ALPDMDED ILDA DFL  N    ++F+++  KLR++WL++ L    QM+I  +T+ G++  L+VL +DT+  VKAKIE KEGYP ++QR
Subjt:  SIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPRQQQR

Query:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC
        L + G +L+   TL  C +  GS L +IL  C
Subjt:  LVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC

SwissProt top hitse value%identityAlignment
P0CG82 Polyubiquitin1.2e-1537.68Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        D+  S+++ +++  I+  E +P  D+  ++ A   L D    +   +  ++ L    L+ +LR    MQIFVKTL G+ ++LDV  +DTI +VKAKI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL
        EG P  QQRL+F G +L+D RTL    +   S+LH++L
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL

P23324 Polyubiquitin5.5e-1638.41Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        D+  S+++++++T I+  E +P  D+  ++ A   L D    A   +  ++ L    L+ +LR    MQIFVKTL G+ ++LDV  +DTI++VK KI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL
        EG P  QQRL+F G +L+D RTL    +   S+LH++L
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL

Q3E7K8 Polyubiquitin 121.2e-1536.96Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        ++  S+++++++  I+ +E +P  D+  ++ A   L D    A   V  D+ L        LR +  MQIFVKTL G+ ++L+V ++DTI+++KAKI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL
        EG P  QQRL+F G +L+D RTL    +   S+LH++L
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL

Q58G87 Polyubiquitin 31.6e-1536.96Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        ++  S+++++++  I+  E +P  D+  ++ A   L D    A   +  ++ L    L+ +LR    MQIFVKTL G+ ++L+V ++DTI++VKAKI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL
        EG P  QQRL+F G +L+D RTL    +   S+LH++L
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL

Q9FHQ6 Polyubiquitin 91.0e-1738.41Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        D+  S+++N+++  I+ +E +P +D+  ++ +   L D    A   +  D+ L        LR +  MQIFVKTL G+ ++L+V ++DTI++VKAKI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL
        EG P  QQRL+F G +LDD RTL    +   S+LH++L
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL

Arabidopsis top hitse value%identityAlignment
AT1G55060.1 ubiquitin 128.7e-1736.96Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        ++  S+++++++  I+ +E +P  D+  ++ A   L D    A   V  D+ L        LR +  MQIFVKTL G+ ++L+V ++DTI+++KAKI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL
        EG P  QQRL+F G +L+D RTL    +   S+LH++L
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL

AT3G09790.1 ubiquitin 81.1e-1636.88Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        D+  S+S+++++  I+  E +P +D+  ++ A   L D    A   +  ++ L    L+ +LR    MQIFV+TL G+ ++L+V ++DTI++VKAKI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC
        EG   +QQRL+F G +L+D RTL    +   S+LH++L +C
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVC

AT4G02890.1 Ubiquitin family protein1.9e-1636.96Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        ++  S+++++++  I+  E +P  D+  ++ A   L D    A   +  ++ L    L+ +LR    MQIFVKTL G+ ++L+V ++DTI++VKAKI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL
        EG P  QQRL+F G +L+D RTL    +   S+LH++L
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL

AT4G05320.2 polyubiquitin 101.9e-1636.96Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        ++  S+++++++  I+  E +P  D+  ++ A   L D    A   +  ++ L    L+ +LR    MQIFVKTL G+ ++L+V ++DTI++VKAKI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL
        EG P  QQRL+F G +L+D RTL    +   S+LH++L
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL

AT5G37640.1 ubiquitin 97.1e-1938.41Show/hide
Query:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK
        D+  S+++N+++  I+ +E +P +D+  ++ +   L D    A   +  D+ L        LR +  MQIFVKTL G+ ++L+V ++DTI++VKAKI+ K
Subjt:  DISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAK

Query:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL
        EG P  QQRL+F G +LDD RTL    +   S+LH++L
Subjt:  EGYPRQQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTAATGATGATATCTCAATCTCAAACTCACTGAACTCCATTGAAACAGTGATTAAAGCTGTGGAAGCATTACCAGATATGGATGAAGATCTTATTTTAGATGC
CTTTGATTTCCTAATGGACAATGAAATTAAAGCCAAAGTCTTTGTTTCAATGGATGCCAAATTGCGTAGAAAGTGGTTGATCAAGAAACTTCGTCCCCAGCCTCAGATGC
AAATCTTTGTGAAAACTTTGGAGGGGAGAAAGATGAGTTTAGATGTTTTAACGACGGATACAATTAATGATGTGAAGGCTAAAATAGAAGCAAAAGAAGGGTATCCTCGA
CAACAGCAGCGATTGGTTTTTAATGGTTGGAAGCTTGATGATGATAGAACCTTAGGTAGCTGTGGCCTTTGGAGTGGCTCTTCATTGCACATGATTCTTTGTGTGTGTGA
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGTAATGATGATATCTCAATCTCAAACTCACTGAACTCCATTGAAACAGTGATTAAAGCTGTGGAAGCATTACCAGATATGGATGAAGATCTTATTTTAGATGC
CTTTGATTTCCTAATGGACAATGAAATTAAAGCCAAAGTCTTTGTTTCAATGGATGCCAAATTGCGTAGAAAGTGGTTGATCAAGAAACTTCGTCCCCAGCCTCAGATGC
AAATCTTTGTGAAAACTTTGGAGGGGAGAAAGATGAGTTTAGATGTTTTAACGACGGATACAATTAATGATGTGAAGGCTAAAATAGAAGCAAAAGAAGGGTATCCTCGA
CAACAGCAGCGATTGGTTTTTAATGGTTGGAAGCTTGATGATGATAGAACCTTAGGTAGCTGTGGCCTTTGGAGTGGCTCTTCATTGCACATGATTCTTTGTGTGTGTGA
TTGA
Protein sequenceShow/hide protein sequence
MGSNDDISISNSLNSIETVIKAVEALPDMDEDLILDAFDFLMDNEIKAKVFVSMDAKLRRKWLIKKLRPQPQMQIFVKTLEGRKMSLDVLTTDTINDVKAKIEAKEGYPR
QQQRLVFNGWKLDDDRTLGSCGLWSGSSLHMILCVCD