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PI0004167 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004167
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr02:7680010..7680758
RNA-Seq ExpressionPI0004167
SyntenyPI0004167
Gene Ontology termsGO:0009228 - thiamine biosynthetic process (biological process)
GO:0009791 - post-embryonic development (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008972 - phosphomethylpyrimidine kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035273.1 transposase [Cucumis melo var. makuwa]9.7e-2142.7Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEF----------------------------------
        MGN+VEQCCR LFHEYS TRSGS  GC   STTSTQTVSGLDANIDFD NE VGEDFVYD IV++                                   
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEF----------------------------------

Query:  ----------------------------------------------------EGFQVVMDNEKELEDLPDFDKLSITD
                                                            EGF+VVM+NEKELEDLPDFDKLSITD
Subjt:  ----------------------------------------------------EGFQVVMDNEKELEDLPDFDKLSITD

KAA0035954.1 thiamine biosynthetic bifunctional enzyme TH1 [Cucumis melo var. makuwa]1.7e-2083.58Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE
        MGN+VEQCCR LFHEYS TRSGS  GC   STTSTQTVSGLDANIDFD NE VGEDFVYD IVEEFE
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE

KAA0052389.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.3e-2185.07Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE
        MGN+VEQCCR LFHEYS TRSGS  GC   STTSTQTVSGLDANIDFD NE VGEDFVYDMIVEEFE
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE

KAA0056156.1 transposase [Cucumis melo var. makuwa]2.0e-2143.68Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFEG--------------------------------
        MGN+VEQCCR LFHEY  TRSGS  GC   STTSTQTVSGLDANIDFD NE VGEDFVYD IV+EFE                                 
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFEG--------------------------------

Query:  --------------------------------------------------FQVVMDNEKELEDLPDFDKLSITD
                                                          F+VVM+NEKELEDLPDFDKLSITD
Subjt:  --------------------------------------------------FQVVMDNEKELEDLPDFDKLSITD

KAA0057608.1 transposase [Cucumis melo var. makuwa]1.7e-2083.58Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE
        MGN+VEQCCR LFHEYS TRSGS  GC   STTSTQTVSGLDANIDFD NE VGEDFVYD IVEEFE
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE

TrEMBL top hitse value%identityAlignment
A0A5A7SXI9 Transposase4.7e-2142.7Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEF----------------------------------
        MGN+VEQCCR LFHEYS TRSGS  GC   STTSTQTVSGLDANIDFD NE VGEDFVYD IV++                                   
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEF----------------------------------

Query:  ----------------------------------------------------EGFQVVMDNEKELEDLPDFDKLSITD
                                                            EGF+VVM+NEKELEDLPDFDKLSITD
Subjt:  ----------------------------------------------------EGFQVVMDNEKELEDLPDFDKLSITD

A0A5A7UFZ0 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.6e-2185.07Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE
        MGN+VEQCCR LFHEYS TRSGS  GC   STTSTQTVSGLDANIDFD NE VGEDFVYDMIVEEFE
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE

A0A5A7UPB8 Transposase9.5e-2243.68Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFEG--------------------------------
        MGN+VEQCCR LFHEY  TRSGS  GC   STTSTQTVSGLDANIDFD NE VGEDFVYD IV+EFE                                 
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFEG--------------------------------

Query:  --------------------------------------------------FQVVMDNEKELEDLPDFDKLSITD
                                                          F+VVM+NEKELEDLPDFDKLSITD
Subjt:  --------------------------------------------------FQVVMDNEKELEDLPDFDKLSITD

A0A5A7URG0 Zinc finger BED domain-containing protein RICESLEEPER 3-like8.0e-2183.58Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGCRST--TSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE
        MGN+VEQCCR LFHEYS TRSGS  GC ST  TSTQTVSGLDANIDFD NE VGEDFVYD IVEEFE
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGCRST--TSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like8.0e-2183.58Show/hide
Query:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE
        MGN+VEQCCR LFHEYS TRSGS  GC   STTSTQTVSGLDANIDFD NE VGEDFVYD IVEEFE
Subjt:  MGNLVEQCCRCLFHEYSYTRSGSGPGC--RSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFE

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.0e-0392.31Show/hide
Query:  EGFQVVMDNEKELEDLPDFDKLSITD
        EGF+VVM+NEKELEDLPDFDKLSITD
Subjt:  EGFQVVMDNEKELEDLPDFDKLSITD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTTAGTGGAACAATGTTGTAGATGTCTTTTTCATGAGTATAGTTATACTCGAAGTGGCAGTGGACCAGGATGTCGTAGTACTACTAGTACACAAACTGTCTC
AGGCTTGGATGCGAATATTGATTTTGATCCAAATGAAAAGGTGGGTGAAGATTTTGTCTATGACATGATTGTTGAGGAATTTGAAGGATTCCAGGTGGTTATGGATAATG
AAAAGGAGCTTGAAGACCTTCCAGATTTTGATAAGTTGTCAATTACCGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATTTAGTGGAACAATGTTGTAGATGTCTTTTTCATGAGTATAGTTATACTCGAAGTGGCAGTGGACCAGGATGTCGTAGTACTACTAGTACACAAACTGTCTC
AGGCTTGGATGCGAATATTGATTTTGATCCAAATGAAAAGGTGGGTGAAGATTTTGTCTATGACATGATTGTTGAGGAATTTGAAGGATTCCAGGTGGTTATGGATAATG
AAAAGGAGCTTGAAGACCTTCCAGATTTTGATAAGTTGTCAATTACCGACTAG
Protein sequenceShow/hide protein sequence
MGNLVEQCCRCLFHEYSYTRSGSGPGCRSTTSTQTVSGLDANIDFDPNEKVGEDFVYDMIVEEFEGFQVVMDNEKELEDLPDFDKLSITD