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PI0004175 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004175
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCell wall protein DAN4-like
Genome locationchr06:20430671..20431358
RNA-Seq ExpressionPI0004175
SyntenyPI0004175
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056279.1 cell wall protein DAN4-like [Cucumis melo var. makuwa]5.2e-2177.98Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGSTT-TTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAETS
        MAYQSLAFLALIIVAVTGAVAQAP+TSPTS+P++ T    SSASS SSL STT  T++ SSA A SISVAPAFSP   DS+AQSPTTATSPTGS SAETS
Subjt:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGSTT-TTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAETS

Query:  RLFTNGFLG
        RLFTNGF G
Subjt:  RLFTNGFLG

KAA0056285.1 cell wall protein DAN4-like [Cucumis melo var. makuwa]3.3e-2378.9Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGS-TTTTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAETS
        MAYQSLA LALI+VAVTGAVAQAPSTSPTSSP++ TSS DSS SS SSL S TTTT++ SSA A SISVAPAFSP   DS+AQSPTTATSPTGS S ETS
Subjt:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGS-TTTTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAETS

Query:  RLFTNGFLG
        R FTNGF G
Subjt:  RLFTNGFLG

KAE8650786.1 hypothetical protein Csa_017544 [Cucumis sativus]1.3e-1670Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAPSTS---PT--SSPSSTTSSFDSSA-SSPSSLGSTTTT------SSDSSAGAPSISVAPAFSPDSTDSNAQSPTTAT
        MAYQSLAFLALIIVAVTG VAQ P++S   PT  S+P+ TTSSFDSS  SS SSL STTTT      SS SS G+PSISVAP  +P   DS AQSPTTA 
Subjt:  MAYQSLAFLALIIVAVTGAVAQAPSTS---PT--SSPSSTTSSFDSSA-SSPSSLGSTTTT------SSDSSAGAPSISVAPAFSPDSTDSNAQSPTTAT

Query:  SPTGSSSAETSRLFTNGFLG
        SPTG SSAETSR FTNGF G
Subjt:  SPTGSSSAETSRLFTNGFLG

KGN58213.1 hypothetical protein Csa_017497 [Cucumis sativus]3.0e-1667.86Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAP-STSPTSSPSSTTSSFDSSASSPSSLGS---TTTTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSA
        MAYQSLAFLALIIVA+TGAVAQ P S++P  + SST +   SS+SS SSL S   TTTTSS SS  +PSIS AP  SP   DS+AQSPTTATSP+GS S 
Subjt:  MAYQSLAFLALIIVAVTGAVAQAP-STSPTSSPSSTTSSFDSSASSPSSLGS---TTTTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSA

Query:  ETSRLFTNGFLG
        ETSRLF+NGF G
Subjt:  ETSRLFTNGFLG

XP_008450206.1 PREDICTED: cell wall protein DAN4-like [Cucumis melo]1.2e-2276.15Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGSTT--TTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAET
        MAYQSLAFL LIIVA+TG VAQAPSTSPTS+P++ TSSFDSS SS SSL STT  TT++ SS    SIS+APAFSP   DS+AQSPTTATSPTGS+SAET
Subjt:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGSTT--TTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAET

Query:  SRLFTNGFL
        SRLF+NGFL
Subjt:  SRLFTNGFL

TrEMBL top hitse value%identityAlignment
A0A0A0L8Q5 Uncharacterized protein1.4e-1667.86Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAP-STSPTSSPSSTTSSFDSSASSPSSLGS---TTTTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSA
        MAYQSLAFLALIIVA+TGAVAQ P S++P  + SST +   SS+SS SSL S   TTTTSS SS  +PSIS AP  SP   DS+AQSPTTATSP+GS S 
Subjt:  MAYQSLAFLALIIVAVTGAVAQAP-STSPTSSPSSTTSSFDSSASSPSSLGS---TTTTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSA

Query:  ETSRLFTNGFLG
        ETSRLF+NGF G
Subjt:  ETSRLFTNGFLG

A0A0A0LB81 Uncharacterized protein1.9e-1669.83Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSA-SSPSSLGSTTTT-------SSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTG
        MAYQSLAFLALIIVAVTG VAQ P+   +S+P+ TTSSFDSS  SS SSL STTTT       SS SSA +PSISVAP  +P   DS AQSPTTA SPTG
Subjt:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSA-SSPSSLGSTTTT-------SSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTG

Query:  SSSAETSRLFTNGFLG
         SSAETSR FTNGF G
Subjt:  SSSAETSRLFTNGFLG

A0A1S3BPQ2 cell wall protein DAN4-like6.0e-2376.15Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGSTT--TTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAET
        MAYQSLAFL LIIVA+TG VAQAPSTSPTS+P++ TSSFDSS SS SSL STT  TT++ SS    SIS+APAFSP   DS+AQSPTTATSPTGS+SAET
Subjt:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGSTT--TTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAET

Query:  SRLFTNGFL
        SRLF+NGFL
Subjt:  SRLFTNGFL

A0A5D3C1H7 Cell wall protein DAN4-like1.6e-2378.9Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGS-TTTTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAETS
        MAYQSLA LALI+VAVTGAVAQAPSTSPTSSP++ TSS DSS SS SSL S TTTT++ SSA A SISVAPAFSP   DS+AQSPTTATSPTGS S ETS
Subjt:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGS-TTTTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAETS

Query:  RLFTNGFLG
        R FTNGF G
Subjt:  RLFTNGFLG

A0A5D3C1I1 Cell wall protein DAN4-like2.5e-2177.98Show/hide
Query:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGSTT-TTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAETS
        MAYQSLAFLALIIVAVTGAVAQAP+TSPTS+P++ T    SSASS SSL STT  T++ SSA A SISVAPAFSP   DS+AQSPTTATSPTGS SAETS
Subjt:  MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGSTT-TTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAETS

Query:  RLFTNGFLG
        RLFTNGF G
Subjt:  RLFTNGFLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATCAATCTCTTGCTTTTCTGGCTCTCATCATTGTCGCCGTCACCGGTGCTGTCGCTCAGGCTCCTTCTACCTCCCCCACCTCCTCTCCATCTTCCACGACCTC
CTCATTTGATTCCTCTGCCTCCTCTCCATCTTCACTCGGTTCAACTACCACCACCTCCTCAGATTCCTCTGCCGGTGCTCCATCAATCTCAGTGGCTCCAGCATTCTCAC
CCGATTCCACTGATTCTAATGCTCAATCACCAACGACCGCCACATCTCCCACCGGTTCTTCTTCTGCTGAGACTTCTCGCTTGTTTACTAATGGTTTCCTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
CTCTTCTTCATCATCCATCCCTTCTTTCCATCTTCTTTTTCTTCAGTATCATCTCTTACATCAATTATCATAATGGCTTATCAATCTCTTGCTTTTCTGGCTCTCATCAT
TGTCGCCGTCACCGGTGCTGTCGCTCAGGCTCCTTCTACCTCCCCCACCTCCTCTCCATCTTCCACGACCTCCTCATTTGATTCCTCTGCCTCCTCTCCATCTTCACTCG
GTTCAACTACCACCACCTCCTCAGATTCCTCTGCCGGTGCTCCATCAATCTCAGTGGCTCCAGCATTCTCACCCGATTCCACTGATTCTAATGCTCAATCACCAACGACC
GCCACATCTCCCACCGGTTCTTCTTCTGCTGAGACTTCTCGCTTGTTTACTAATGGTTTCCTTGGCTGATAGATTATGGAGAGCAGATTCAAATCTCAACTTTTGGTAGA
GACTAATATTATTTTAATCATTTGAGCTATGCTCCTCGAGGCAATGTCGTCGAGTCATATTTTACTTTTTCTCTTTTATTAAGTTTCATTCCAATGTAATCGAATAAAAA
CGAATGAGAATTATTTTGATATAATTGAAATTGTTAAAAATTGATCAAAATCTCATGCGATAAAACAAGGGATTGTGTTCGATTGCACCCATATTTTTGTCAAAATTTCA
ACATTCAATTAAGACATCGAATATTTTA
Protein sequenceShow/hide protein sequence
MAYQSLAFLALIIVAVTGAVAQAPSTSPTSSPSSTTSSFDSSASSPSSLGSTTTTSSDSSAGAPSISVAPAFSPDSTDSNAQSPTTATSPTGSSSAETSRLFTNGFLG