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PI0004177 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0004177
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:23365365..23365981
RNA-Seq ExpressionPI0004177
SyntenyPI0004177
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.3e-5567.23Show/hide
Query:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP
        RLYIT+    +G  RSNN R RDVADD QQVLDICNNN+R+ME+IH MY     H+PIV P ++R RV+VEE ELD+VYHNVEE+ P TQ  +QTGYGSP
Subjt:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP

Query:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN
         + + TFG GYCD EV T YYDSGVG SSS MDV PSTSYMHGH H  G  EHNEY+Y+EAPT+V D QEYQQ+PEN
Subjt:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.5e-5271.34Show/hide
Query:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP
        RLYITR +A VGHLRSNN R RDVADDPQQVL+ICNNN+RYME+IH MYD     + IV PPV+R RVRVEE ELD+VYHNVEEVPP TQT SQTGYGSP
Subjt:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP

Query:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYM
           + TFGAGY DSEVGTGYYD+G+  SS  MDV PS  YMHGH  G G  EHN+Y+
Subjt:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYM

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-5872.32Show/hide
Query:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP
        RLYITR  A VG  RSNN R RDVADD QQ LDICNNNERYME+IH MYD     +PIV PPV+R  VRVEE ELDKVYHNVEEVP  TQT SQTGYGSP
Subjt:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP

Query:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN
           + TF AGYCD EVG GYYD+GVG SSS +DV PSTSYMHGH  G G  EHNEY+Y+EAP DV D QEYQQ+PEN
Subjt:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]5.3e-5573.01Show/hide
Query:  RSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSPTMTILTFGAGYCDS
        RSNN R RDVADD QQ LDICNNNERYME+IH MYD     +PIV PPV+R  VRVEE ELDKVYHNVEEVP  TQT SQTGYGSP   + TF AGYCD 
Subjt:  RSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSPTMTILTFGAGYCDS

Query:  EVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN
        EVG GYYD+GVG SSS +DV PSTSYMHGH  G G  EHNEY+Y+EAP DV D QEYQQ+PEN
Subjt:  EVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.3e-6373.45Show/hide
Query:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP
        RLYITR  A+VGHLRSNN R RDV +DPQQVLDICNNNERYME IH +YD     +PIV PPV+RER RVEE ELD+VYHNVEEVPP TQT SQTGYGSP
Subjt:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP

Query:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN
           + TFGAGYCDSEV  GYYD+ VG  SS MDV PSTSYM+GHG G G  EHNEY+Y+EAPTDV D QEYQQ+P+N
Subjt:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.6e-5567.23Show/hide
Query:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP
        RLYIT+    +G  RSNN R RDVADD QQVLDICNNN+R+ME+IH MY     H+PIV P ++R RV+VEE ELD+VYHNVEE+ P TQ  +QTGYGSP
Subjt:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP

Query:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN
         + + TFG GYCD EV T YYDSGVG SSS MDV PSTSYMHGH H  G  EHNEY+Y+EAPT+V D QEYQQ+PEN
Subjt:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-5271.34Show/hide
Query:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP
        RLYITR +A VGHLRSNN R RDVADDPQQVL+ICNNN+RYME+IH MYD     + IV PPV+R RVRVEE ELD+VYHNVEEVPP TQT SQTGYGSP
Subjt:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP

Query:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYM
           + TFGAGY DSEVGTGYYD+G+  SS  MDV PS  YMHGH  G G  EHN+Y+
Subjt:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYM

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.6e-5972.32Show/hide
Query:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP
        RLYITR  A VG  RSNN R RDVADD QQ LDICNNNERYME+IH MYD     +PIV PPV+R  VRVEE ELDKVYHNVEEVP  TQT SQTGYGSP
Subjt:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP

Query:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN
           + TF AGYCD EVG GYYD+GVG SSS +DV PSTSYMHGH  G G  EHNEY+Y+EAP DV D QEYQQ+PEN
Subjt:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X22.6e-5573.01Show/hide
Query:  RSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSPTMTILTFGAGYCDS
        RSNN R RDVADD QQ LDICNNNERYME+IH MYD     +PIV PPV+R  VRVEE ELDKVYHNVEEVP  TQT SQTGYGSP   + TF AGYCD 
Subjt:  RSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSPTMTILTFGAGYCDS

Query:  EVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN
        EVG GYYD+GVG SSS +DV PSTSYMHGH  G G  EHNEY+Y+EAP DV D QEYQQ+PEN
Subjt:  EVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.6e-6373.45Show/hide
Query:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP
        RLYITR  A+VGHLRSNN R RDV +DPQQVLDICNNNERYME IH +YD     +PIV PPV+RER RVEE ELD+VYHNVEEVPP TQT SQTGYGSP
Subjt:  RLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSP

Query:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN
           + TFGAGYCDSEV  GYYD+ VG  SS MDV PSTSYM+GHG G G  EHNEY+Y+EAPTDV D QEYQQ+P+N
Subjt:  TMTILTFGAGYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGTTGTGGGTCATCTGAGATCGAACAACAAAAGATTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATCCTCCATGTACCTATTGTACTTCCACCAGTTAACAGGGAACGTGTTCGAGTGGAAGAAC
CTGAACTCGATAAAGTTTACCATAACGTAGAAGAAGTACCTCCAATGACACAAACACATAGCCAAACTGGTTATGGTAGCCCGACGATGACGATCCTAACATTTGGAGCA
GGATATTGTGATTCTGAGGTCGGTACAGGATATTATGATTCAGGGGTCGGTTCATCGTCTTCATGCATGGATGTCAGACCATCAACTTCTTACATGCATGGACATGGACA
CGGACGAGGCCGCGAAGAACATAACGAATATATGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAAAACCAGAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTCTACATCACTCGATCAAAAGCAGTTGTGGGTCATCTGAGATCGAACAACAAAAGATTTCGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAA
TAATAATGAGAGGTACATGGAGGACATACATTATATGTACGATGTACCTATCCTCCATGTACCTATTGTACTTCCACCAGTTAACAGGGAACGTGTTCGAGTGGAAGAAC
CTGAACTCGATAAAGTTTACCATAACGTAGAAGAAGTACCTCCAATGACACAAACACATAGCCAAACTGGTTATGGTAGCCCGACGATGACGATCCTAACATTTGGAGCA
GGATATTGTGATTCTGAGGTCGGTACAGGATATTATGATTCAGGGGTCGGTTCATCGTCTTCATGCATGGATGTCAGACCATCAACTTCTTACATGCATGGACATGGACA
CGGACGAGGCCGCGAAGAACATAACGAATATATGTACTATGAAGCACCTACAGACGTCCCAGATCCACAAGAGTACCAACAAAAACCAGAGAATTAA
Protein sequenceShow/hide protein sequence
MRLYITRSKAVVGHLRSNNKRFRDVADDPQQVLDICNNNERYMEDIHYMYDVPILHVPIVLPPVNRERVRVEEPELDKVYHNVEEVPPMTQTHSQTGYGSPTMTILTFGA
GYCDSEVGTGYYDSGVGSSSSCMDVRPSTSYMHGHGHGRGREEHNEYMYYEAPTDVPDPQEYQQKPEN